RNA–Protein interactions for RNA: ENST00000402203.5

TNRC6B-203, Transcript of trinucleotide repeat containing 6B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNRC6B, Length 3,444 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-203ENST00000402203 SHANK2Q9UPX8 1470 aa18.17■□□□□ 0.5
TNRC6B-203ENST00000402203 B4GALNT3Q6L9W6 998 aa18.17■□□□□ 0.5
TNRC6B-203ENST00000402203 PLA2R1Q13018 1463 aa18.16■□□□□ 0.5
TNRC6B-203ENST00000402203 PREX2Q70Z35 1606 aa18.16■□□□□ 0.5
TNRC6B-203ENST00000402203 ABCC2Q92887 1545 aa18.15■□□□□ 0.5
TNRC6B-203ENST00000402203 RSPH4AQ5TD94 716 aa18.14■□□□□ 0.5
TNRC6B-203ENST00000402203 SPAG9O60271 1321 aaKnown RBP18.14■□□□□ 0.49
TNRC6B-203ENST00000402203 KDM5CP41229 1560 aa18.13■□□□□ 0.49
TNRC6B-203ENST00000402203 ARHGEF5Q12774 1597 aa18.11■□□□□ 0.49
TNRC6B-203ENST00000402203 KIF3BO15066 747 aa18.11■□□□□ 0.49
TNRC6B-203ENST00000402203 RALGAPBQ86X10 1494 aa18.1■□□□□ 0.49
TNRC6B-203ENST00000402203 RBM19Q9Y4C8 960 aaKnown RBP18.08■□□□□ 0.49
TNRC6B-203ENST00000402203 ZBED9Q6R2W3 1325 aa18.08■□□□□ 0.49
TNRC6B-203ENST00000402203 PNISRQ8TF01 805 aaKnown RBP18.08■□□□□ 0.48
TNRC6B-203ENST00000402203 SHROOM2Q13796 1616 aa18.08■□□□□ 0.48
TNRC6B-203ENST00000402203 PLCH2O75038 1416 aa18.08■□□□□ 0.48
TNRC6B-203ENST00000402203 UHRF1BP1Q6BDS2 1440 aa18.08■□□□□ 0.48
TNRC6B-203ENST00000402203 ZCCHC11Q5TAX3 1644 aaKnown RBP18.07■□□□□ 0.48
TNRC6B-203ENST00000402203 A2MP01023 1474 aa18.07■□□□□ 0.48
TNRC6B-203ENST00000402203 DISP3Q9P2K9 1392 aa18.07■□□□□ 0.48
TNRC6B-203ENST00000402203 PRAG1Q86YV5 1406 aa18.06■□□□□ 0.48
TNRC6B-203ENST00000402203 PANK3Q9H999 370 aa18.06■□□□□ 0.48
TNRC6B-203ENST00000402203 CHGAP10645 457 aaKnown RBP18.05■□□□□ 0.48
TNRC6B-203ENST00000402203 MYO5CQ9NQX4 1742 aa18.05■□□□□ 0.48
TNRC6B-203ENST00000402203 SCAPERQ9BY12 1400 aa18.04■□□□□ 0.48
TNRC6B-203ENST00000402203 KDM5DQ9BY66 1539 aa18.03■□□□□ 0.48
TNRC6B-203ENST00000402203 TESK2Q96S53 571 aa18.03■□□□□ 0.48
TNRC6B-203ENST00000402203 NUTM2DQ5VT03 806 aaPredicted RBP18.01■□□□□ 0.47
TNRC6B-203ENST00000402203 GGT6Q6P531 493 aa17.99■□□□□ 0.47
TNRC6B-203ENST00000402203 CLASP1Q7Z460 1538 aa17.98■□□□□ 0.47
TNRC6B-203ENST00000402203 CDCA7LQ96GN5 454 aa17.98■□□□□ 0.47
TNRC6B-203ENST00000402203 PER1O15534 1290 aaPredicted RBP17.97■□□□□ 0.47
TNRC6B-203ENST00000402203 MYBBP1AQ9BQG0 1328 aaKnown RBP17.97■□□□□ 0.47
TNRC6B-203ENST00000402203 POLR1AO95602 1720 aaPredicted RBP17.96■□□□□ 0.47
TNRC6B-203ENST00000402203 CFAP70Q5T0N1 1121 aa17.96■□□□□ 0.47
TNRC6B-203ENST00000402203 PPP4R2Q9NY27 417 aa17.96■□□□□ 0.47
TNRC6B-203ENST00000402203 DUOX2Q9NRD8 1548 aa17.96■□□□□ 0.46
TNRC6B-203ENST00000402203 NUDCQ9Y266 331 aa17.95■□□□□ 0.46
TNRC6B-203ENST00000402203 FANCAO15360 1455 aa17.94■□□□□ 0.46
TNRC6B-203ENST00000402203 ARID4BQ4LE39 1312 aaPredicted RBP17.94■□□□□ 0.46
TNRC6B-203ENST00000402203 TMF1P82094 1093 aa17.94■□□□□ 0.46
TNRC6B-203ENST00000402203 ABCC1P33527 1531 aa17.93■□□□□ 0.46
TNRC6B-203ENST00000402203 CFAP65Q6ZU64 1925 aaKnown RBP17.93■□□□□ 0.46
TNRC6B-203ENST00000402203 UGGT1Q9NYU2 1555 aa17.92■□□□□ 0.46
TNRC6B-203ENST00000402203 KTN1Q86UP2 1357 aaKnown RBP17.92■□□□□ 0.46
TNRC6B-203ENST00000402203 NPM1P06748 294 aaKnown RBP eCLIP17.92■□□□□ 0.46
TNRC6B-203ENST00000402203 TRPM1Q7Z4N2 1603 aa17.92■□□□□ 0.46
TNRC6B-203ENST00000402203 RAPGEF3O95398 923 aa17.92■□□□□ 0.46
TNRC6B-203ENST00000402203 UNC13BO14795 1591 aa17.92■□□□□ 0.46
TNRC6B-203ENST00000402203 RALBP1Q15311 655 aa17.91■□□□□ 0.46
TNRC6B-203ENST00000402203 ERBINQ96RT1 1412 aa17.91■□□□□ 0.46
TNRC6B-203ENST00000402203 ADGRF5Q8IZF2 1346 aa17.91■□□□□ 0.46
TNRC6B-203ENST00000402203 ASXL2Q76L83 1435 aa17.91■□□□□ 0.46
TNRC6B-203ENST00000402203 WDR7Q9Y4E6 1490 aa17.9■□□□□ 0.46
TNRC6B-203ENST00000402203 PLIN1O60240 522 aa17.89■□□□□ 0.46
TNRC6B-203ENST00000402203 MAST1Q9Y2H9 1570 aa17.89■□□□□ 0.45
TNRC6B-203ENST00000402203 ADGRL1O94910 1474 aa17.89■□□□□ 0.45
TNRC6B-203ENST00000402203 NLRP13Q86W25 1043 aa17.89■□□□□ 0.45
TNRC6B-203ENST00000402203 OSCARQ8IYS5 282 aa17.89■□□□□ 0.45
TNRC6B-203ENST00000402203 IQGAP3Q86VI3 1631 aa17.88■□□□□ 0.45
TNRC6B-203ENST00000402203 PLXNC1O60486 1568 aa17.87■□□□□ 0.45
TNRC6B-203ENST00000402203 ATP10AO60312 1499 aa17.87■□□□□ 0.45
TNRC6B-203ENST00000402203 TMEM132EQ6IEE7 984 aa17.87■□□□□ 0.45
TNRC6B-203ENST00000402203 UHRF1BP1LA0JNW5 1464 aa17.86■□□□□ 0.45
TNRC6B-203ENST00000402203 TNNT2P45379 298 aaPredicted RBP17.85■□□□□ 0.45
TNRC6B-203ENST00000402203 CCDC136Q96JN2 1154 aa17.85■□□□□ 0.45
TNRC6B-203ENST00000402203 KNSTRNQ9Y448 316 aa17.85■□□□□ 0.45
TNRC6B-203ENST00000402203 E9PCH4 1651 aa17.85■□□□□ 0.45
TNRC6B-203ENST00000402203 MSH5O43196 834 aa17.85■□□□□ 0.45
TNRC6B-203ENST00000402203 ADAMTS8Q9UP79 889 aa17.85■□□□□ 0.45
TNRC6B-203ENST00000402203 ZFYVE16Q7Z3T8 1539 aa17.84■□□□□ 0.45
TNRC6B-203ENST00000402203 BRD4O60885 1362 aaPredicted RBP17.84■□□□□ 0.45
TNRC6B-203ENST00000402203 SMG6Q86US8 1419 aaKnown RBP17.84■□□□□ 0.45
TNRC6B-203ENST00000402203 GPRASP1Q5JY77 1395 aa17.84■□□□□ 0.45
TNRC6B-203ENST00000402203 TRAK1Q9UPV9 953 aa17.84■□□□□ 0.45
TNRC6B-203ENST00000402203 CCDC146Q8IYE0 955 aa17.84■□□□□ 0.45
TNRC6B-203ENST00000402203 SAFB2Q14151 953 aaKnown RBP eCLIP17.83■□□□□ 0.45
TNRC6B-203ENST00000402203 SKAP1Q86WV1 359 aa17.83■□□□□ 0.45
TNRC6B-203ENST00000402203 PARD3Q8TEW0 1356 aa17.83■□□□□ 0.44
TNRC6B-203ENST00000402203 KANK1Q14678 1352 aa17.83■□□□□ 0.44
TNRC6B-203ENST00000402203 EXOC6Q8TAG9 804 aa17.82■□□□□ 0.44
TNRC6B-203ENST00000402203 COL17A1Q9UMD9 1497 aaPredicted RBP17.82■□□□□ 0.44
TNRC6B-203ENST00000402203 LRPPRCP42704 1394 aaKnown RBP17.81■□□□□ 0.44
TNRC6B-203ENST00000402203 ATP7AQ04656 1500 aa17.81■□□□□ 0.44
TNRC6B-203ENST00000402203 CYB5RLQ6IPT4 315 aa17.81■□□□□ 0.44
TNRC6B-203ENST00000402203 MAGI2Q86UL8 1455 aa17.8■□□□□ 0.44
TNRC6B-203ENST00000402203 CLTCL1P53675 1640 aa17.79■□□□□ 0.44
TNRC6B-203ENST00000402203 PRDM15P57071 1507 aaPredicted RBP17.79■□□□□ 0.44
TNRC6B-203ENST00000402203 PPP2R1AP30153 589 aa17.78■□□□□ 0.44
TNRC6B-203ENST00000402203 RCAN3Q9UKA8 241 aa17.78■□□□□ 0.44
TNRC6B-203ENST00000402203 WASHC2CQ9Y4E1 1318 aa17.77■□□□□ 0.43
TNRC6B-203ENST00000402203 AMER1Q5JTC6 1135 aaPredicted RBP17.75■□□□□ 0.43
TNRC6B-203ENST00000402203 CD109Q6YHK3 1445 aa17.75■□□□□ 0.43
TNRC6B-203ENST00000402203 RTEL1-TNFRSF6BF6WH68 1400 aa17.75■□□□□ 0.43
TNRC6B-203ENST00000402203 RRP1P56182 461 aaKnown RBP17.73■□□□□ 0.43
TNRC6B-203ENST00000402203 ANP32EQ9BTT0 268 aa17.73■□□□□ 0.43
TNRC6B-203ENST00000402203 CARD14Q9BXL6 1004 aa17.73■□□□□ 0.43
TNRC6B-203ENST00000402203 WDR43Q15061 677 aaKnown RBP eCLIP17.73■□□□□ 0.43
TNRC6B-203ENST00000402203 STK26Q9P289 416 aa17.73■□□□□ 0.43
TNRC6B-203ENST00000402203 SLC12A5Q9H2X9 1139 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms