RNA–Protein interactions for RNA: ENST00000400908.6

RERE-204, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 5,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-204ENST00000400908 SF3A1Q15459 793 aaKnown RBP17.18■□□□□ 0.34
RERE-204ENST00000400908 EFCAB2Q5VUJ9 269 aa17.18■□□□□ 0.34
RERE-204ENST00000400908 CDR1P51861 262 aa17.17■□□□□ 0.34
RERE-204ENST00000400908 CFTRP13569 1480 aa17.17■□□□□ 0.34
RERE-204ENST00000400908 KIF21BO75037 1637 aa17.17■□□□□ 0.34
RERE-204ENST00000400908 MARCH6O60337 910 aa17.17■□□□□ 0.34
RERE-204ENST00000400908 KIF3AQ9Y496 699 aa17.17■□□□□ 0.34
RERE-204ENST00000400908 DHX57Q6P158 1386 aaKnown RBP17.16■□□□□ 0.34
RERE-204ENST00000400908 MFAP1P55081 439 aaKnown RBP17.16■□□□□ 0.34
RERE-204ENST00000400908 TMF1P82094 1093 aa17.16■□□□□ 0.34
RERE-204ENST00000400908 RTF1Q92541 710 aaKnown RBP17.16■□□□□ 0.34
RERE-204ENST00000400908 KRI1Q8N9T8 703 aaKnown RBP17.16■□□□□ 0.34
RERE-204ENST00000400908 GOLGA6L19H0YKK7 550 aa17.16■□□□□ 0.34
RERE-204ENST00000400908 GPATCH3Q96I76 525 aa17.16■□□□□ 0.34
RERE-204ENST00000400908 DDX11L8A8MPP1 907 aa17.15■□□□□ 0.34
RERE-204ENST00000400908 CCDC191Q8NCU4 936 aa17.15■□□□□ 0.34
RERE-204ENST00000400908 GORABQ5T7V8 394 aa17.14■□□□□ 0.33
RERE-204ENST00000400908 WWC1Q8IX03 1113 aa17.14■□□□□ 0.33
RERE-204ENST00000400908 IPO9Q96P70 1041 aaKnown RBP17.13■□□□□ 0.33
RERE-204ENST00000400908 GGT6Q6P531 493 aa17.13■□□□□ 0.33
RERE-204ENST00000400908 MAP7D2Q96T17 732 aa17.13■□□□□ 0.33
RERE-204ENST00000400908 ZNF592Q92610 1267 aa17.13■□□□□ 0.33
RERE-204ENST00000400908 BECN2A8MW95 431 aa17.13■□□□□ 0.33
RERE-204ENST00000400908 VPS53Q5VIR6 699 aa17.13■□□□□ 0.33
RERE-204ENST00000400908 TMX4Q9H1E5 349 aaPredicted RBP17.12■□□□□ 0.33
RERE-204ENST00000400908 KIF16BQ96L93 1317 aa17.12■□□□□ 0.33
RERE-204ENST00000400908 CCER2I3L3R5 266 aa17.12■□□□□ 0.33
RERE-204ENST00000400908 IPO7O95373 1038 aaKnown RBP17.12■□□□□ 0.33
RERE-204ENST00000400908 AK7Q96M32 723 aa17.12■□□□□ 0.33
RERE-204ENST00000400908 ITPRIPQ8IWB1 547 aa17.11■□□□□ 0.33
RERE-204ENST00000400908 HMGXB3Q12766 1538 aa17.11■□□□□ 0.33
RERE-204ENST00000400908 RUFY1Q96T51 708 aa17.11■□□□□ 0.33
RERE-204ENST00000400908 FOXD4L1Q9NU39 408 aa17.1■□□□□ 0.33
RERE-204ENST00000400908 TRIM6-TRIM34B2RNG4 842 aa17.1■□□□□ 0.33
RERE-204ENST00000400908 NOL8Q76FK4 1167 aaKnown RBP17.1■□□□□ 0.33
RERE-204ENST00000400908 L3MBTL2Q969R5 705 aa17.1■□□□□ 0.33
RERE-204ENST00000400908 PMFBP1Q8TBY8 1022 aa17.1■□□□□ 0.33
RERE-204ENST00000400908 ACBD3Q9H3P7 528 aa17.1■□□□□ 0.33
RERE-204ENST00000400908 ST18O60284 1047 aa17.09■□□□□ 0.33
RERE-204ENST00000400908 AQRO60306 1485 aaKnown RBP eCLIP17.09■□□□□ 0.334e-7■■■■■ 27.6
RERE-204ENST00000400908 CC2D2AQ9P2K1 1620 aa17.09■□□□□ 0.33
RERE-204ENST00000400908 MLECQ14165 292 aa17.08■□□□□ 0.33
RERE-204ENST00000400908 NESP48681 1621 aa17.08■□□□□ 0.32
RERE-204ENST00000400908 ERICH3Q5RHP9 1530 aa17.08■□□□□ 0.32
RERE-204ENST00000400908 FAM13BQ9NYF5 915 aa17.08■□□□□ 0.32
RERE-204ENST00000400908 RDXP35241 583 aaKnown RBP17.08■□□□□ 0.32
RERE-204ENST00000400908 TOP2BQ02880 1626 aa17.08■□□□□ 0.32
RERE-204ENST00000400908 ROCK2O75116 1388 aaKnown RBP17.07■□□□□ 0.32
RERE-204ENST00000400908 DCTN1Q14203 1278 aa17.06■□□□□ 0.32
RERE-204ENST00000400908 BICRAQ9NZM4 1560 aa17.06■□□□□ 0.32
RERE-204ENST00000400908 SKOR2Q2VWA4 1001 aaPredicted RBP17.06■□□□□ 0.32
RERE-204ENST00000400908 ARGLU1Q9NWB6 273 aaPredicted RBP17.06■□□□□ 0.32
RERE-204ENST00000400908 RSPH4AQ5TD94 716 aa17.06■□□□□ 0.32
RERE-204ENST00000400908 PTPRGP23470 1445 aa17.05■□□□□ 0.32
RERE-204ENST00000400908 H3BQV1 296 aa17.05■□□□□ 0.32
RERE-204ENST00000400908 IFFO2Q5TF58 517 aa17.05■□□□□ 0.32
RERE-204ENST00000400908 MORC1Q86VD1 984 aa17.05■□□□□ 0.32
RERE-204ENST00000400908 HDAC5Q9UQL6 1122 aa17.05■□□□□ 0.32
RERE-204ENST00000400908 CUX1P39880 1505 aa17.05■□□□□ 0.32
RERE-204ENST00000400908 H0YHG0 523 aa17.05■□□□□ 0.32
RERE-204ENST00000400908 PCMTD1Q96MG8 357 aaPredicted RBP17.05■□□□□ 0.32
RERE-204ENST00000400908 TOMM22Q9NS69 142 aa17.05■□□□□ 0.32
RERE-204ENST00000400908 ATP6V1DQ9Y5K8 247 aa17.04■□□□□ 0.32
RERE-204ENST00000400908 DDX49Q9Y6V7 483 aaKnown RBP17.04■□□□□ 0.32
RERE-204ENST00000400908 FOXD4L5Q5VV16 416 aaPredicted RBP17.04■□□□□ 0.32
RERE-204ENST00000400908 HOMER1Q86YM7 354 aa17.04■□□□□ 0.32
RERE-204ENST00000400908 FOXD4L4Q8WXT5 416 aaPredicted RBP17.04■□□□□ 0.32
RERE-204ENST00000400908 CHMP4AQ9BY43 222 aa17.04■□□□□ 0.32
RERE-204ENST00000400908 CWC15Q9P013 229 aaKnown RBP17.04■□□□□ 0.32
RERE-204ENST00000400908 HSP90B2PQ58FF3 399 aa17.04■□□□□ 0.32
RERE-204ENST00000400908 CHMP4CQ96CF2 233 aa17.04■□□□□ 0.32
RERE-204ENST00000400908 KIF3BO15066 747 aa17.03■□□□□ 0.32
RERE-204ENST00000400908 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.03■□□□□ 0.32
RERE-204ENST00000400908 ANKRD20A12PQ8NF67 263 aa17.03■□□□□ 0.32
RERE-204ENST00000400908 SPAG9O60271 1321 aaKnown RBP17.03■□□□□ 0.32
RERE-204ENST00000400908 SOX12O15370 315 aa17.02■□□□□ 0.32
RERE-204ENST00000400908 ZNF330Q9Y3S2 320 aaPredicted RBP17.02■□□□□ 0.32
RERE-204ENST00000400908 ARAP1Q96P48 1450 aa17.02■□□□□ 0.31
RERE-204ENST00000400908 CHMP3Q9Y3E7 222 aa17.02■□□□□ 0.31
RERE-204ENST00000400908 LRRC9Q6ZRR7 1453 aa17.01■□□□□ 0.31
RERE-204ENST00000400908 RCAN3Q9UKA8 241 aa17.01■□□□□ 0.31
RERE-204ENST00000400908 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.01■□□□□ 0.31
RERE-204ENST00000400908 SAFB2Q14151 953 aaKnown RBP eCLIP17■□□□□ 0.314e-6■■■□□ 15.2
RERE-204ENST00000400908 PHLDB1Q86UU1 1377 aa17■□□□□ 0.31
RERE-204ENST00000400908 FAM184AQ8NB25 1140 aa17■□□□□ 0.31
RERE-204ENST00000400908 GSE1Q14687 1217 aa17■□□□□ 0.31
RERE-204ENST00000400908 FGD6Q6ZV73 1430 aa16.99■□□□□ 0.31
RERE-204ENST00000400908 CCDC47Q96A33 483 aaKnown RBP16.99■□□□□ 0.31
RERE-204ENST00000400908 PLCD4Q9BRC7 762 aa16.99■□□□□ 0.31
RERE-204ENST00000400908 STK31Q9BXU1 1019 aa16.98■□□□□ 0.31
RERE-204ENST00000400908 MNS1Q8NEH6 495 aa16.98■□□□□ 0.31
RERE-204ENST00000400908 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.98■□□□□ 0.311e-6■■■■■ 80.4
RERE-204ENST00000400908 SRPK2P78362 688 aaKnown RBP16.98■□□□□ 0.31
RERE-204ENST00000400908 PRXQ9BXM0 1461 aa16.98■□□□□ 0.31
RERE-204ENST00000400908 G3V3G9 751 aa16.98■□□□□ 0.31
RERE-204ENST00000400908 DCAF8Q5TAQ9 597 aa16.98■□□□□ 0.31
RERE-204ENST00000400908 CASKIN1Q8WXD9 1431 aa16.98■□□□□ 0.31
RERE-204ENST00000400908 AKAP17AQ02040 695 aaKnown RBP16.98■□□□□ 0.31
RERE-204ENST00000400908 KTN1Q86UP2 1357 aaKnown RBP16.98■□□□□ 0.31
RERE-204ENST00000400908 CCDC66A2RUB6 948 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms