RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 SPATA31E1Q6ZUB1 1445 aa16.79■□□□□ 0.28
PPP4R1-202ENST00000400555 TMF1P82094 1093 aa16.78■□□□□ 0.28
PPP4R1-202ENST00000400555 CCDC146Q8IYE0 955 aa16.78■□□□□ 0.28
PPP4R1-202ENST00000400555 NEUROD2Q15784 382 aa16.78■□□□□ 0.28
PPP4R1-202ENST00000400555 PBRM1Q86U86 1689 aa16.78■□□□□ 0.28
PPP4R1-202ENST00000400555 DAXXQ9UER7 740 aaPredicted RBP16.77■□□□□ 0.28
PPP4R1-202ENST00000400555 KIAA0556O60303 1618 aa16.76■□□□□ 0.27
PPP4R1-202ENST00000400555 RAPGEF6Q8TEU7 1601 aa16.76■□□□□ 0.27
PPP4R1-202ENST00000400555 GCC2Q8IWJ2 1684 aa16.75■□□□□ 0.27
PPP4R1-202ENST00000400555 SMG6Q86US8 1419 aaKnown RBP16.75■□□□□ 0.27
PPP4R1-202ENST00000400555 KIF14Q15058 1648 aa16.74■□□□□ 0.27
PPP4R1-202ENST00000400555 RGS3P49796 1198 aa16.73■□□□□ 0.27
PPP4R1-202ENST00000400555 CRBNQ96SW2 442 aa16.73■□□□□ 0.27
PPP4R1-202ENST00000400555 AFAP1Q8N556 730 aa16.73■□□□□ 0.27
PPP4R1-202ENST00000400555 ADAMTS8Q9UP79 889 aa16.72■□□□□ 0.27
PPP4R1-202ENST00000400555 DNMT1P26358 1616 aaKnown RBP16.72■□□□□ 0.27
PPP4R1-202ENST00000400555 ATP10BO94823 1461 aa16.71■□□□□ 0.27
PPP4R1-202ENST00000400555 MAGI1Q96QZ7 1491 aaPredicted RBP16.71■□□□□ 0.27
PPP4R1-202ENST00000400555 IPO9Q96P70 1041 aaKnown RBP16.71■□□□□ 0.27
PPP4R1-202ENST00000400555 CANXP27824 592 aaKnown RBP16.7■□□□□ 0.26
PPP4R1-202ENST00000400555 SLC4A3P48751 1232 aa16.7■□□□□ 0.26
PPP4R1-202ENST00000400555 PDE4AP27815 886 aa16.68■□□□□ 0.26
PPP4R1-202ENST00000400555 SYNJ2O15056 1496 aa16.68■□□□□ 0.26
PPP4R1-202ENST00000400555 NUTM2DQ5VT03 806 aaPredicted RBP16.68■□□□□ 0.26
PPP4R1-202ENST00000400555 KIF3BO15066 747 aa16.67■□□□□ 0.26
PPP4R1-202ENST00000400555 C20orf194Q5TEA3 1177 aa16.67■□□□□ 0.26
PPP4R1-202ENST00000400555 BRD4O60885 1362 aaPredicted RBP16.67■□□□□ 0.26
PPP4R1-202ENST00000400555 ARID4BQ4LE39 1312 aaPredicted RBP16.66■□□□□ 0.26
PPP4R1-202ENST00000400555 EFCAB2Q5VUJ9 269 aa16.66■□□□□ 0.26
PPP4R1-202ENST00000400555 DISP3Q9P2K9 1392 aa16.65■□□□□ 0.26
PPP4R1-202ENST00000400555 EIF4G3O43432 1585 aaKnown RBP16.64■□□□□ 0.26
PPP4R1-202ENST00000400555 NEFMP07197 916 aa16.64■□□□□ 0.25
PPP4R1-202ENST00000400555 RTN4Q9NQC3 1192 aaKnown RBP16.64■□□□□ 0.25
PPP4R1-202ENST00000400555 SAFB2Q14151 953 aaKnown RBP eCLIP16.64■□□□□ 0.25
PPP4R1-202ENST00000400555 SPAG9O60271 1321 aaKnown RBP16.63■□□□□ 0.25
PPP4R1-202ENST00000400555 RSPH4AQ5TD94 716 aa16.62■□□□□ 0.25
PPP4R1-202ENST00000400555 BCORL1Q5H9F3 1711 aa16.62■□□□□ 0.25
PPP4R1-202ENST00000400555 ARHGAP5Q13017 1502 aa16.62■□□□□ 0.25
PPP4R1-202ENST00000400555 FRAT1Q92837 279 aaPredicted RBP16.62■□□□□ 0.25
PPP4R1-202ENST00000400555 APAF1O14727 1248 aa16.61■□□□□ 0.25
PPP4R1-202ENST00000400555 RRP7AQ9Y3A4 280 aaKnown RBP16.61■□□□□ 0.25
PPP4R1-202ENST00000400555 PLEKHH2Q8IVE3 1493 aa16.61■□□□□ 0.25
PPP4R1-202ENST00000400555 CEP170Q5SW79 1584 aa16.6■□□□□ 0.25
PPP4R1-202ENST00000400555 TCERG1O14776 1098 aaKnown RBP16.6■□□□□ 0.25
PPP4R1-202ENST00000400555 PER1O15534 1290 aaPredicted RBP16.6■□□□□ 0.25
PPP4R1-202ENST00000400555 CFAP70Q5T0N1 1121 aa16.59■□□□□ 0.25
PPP4R1-202ENST00000400555 GGT6Q6P531 493 aa16.59■□□□□ 0.25
PPP4R1-202ENST00000400555 PDE3BQ13370 1112 aa16.58■□□□□ 0.25
PPP4R1-202ENST00000400555 TESK2Q96S53 571 aa16.58■□□□□ 0.25
PPP4R1-202ENST00000400555 PPP2R1AP30153 589 aa16.58■□□□□ 0.24
PPP4R1-202ENST00000400555 RALGAPBQ86X10 1494 aa16.58■□□□□ 0.24
PPP4R1-202ENST00000400555 TRAK1Q9UPV9 953 aa16.57■□□□□ 0.24
PPP4R1-202ENST00000400555 GOLGA2Q08379 1002 aa16.57■□□□□ 0.24
PPP4R1-202ENST00000400555 CCDC141Q6ZP82 1450 aa16.55■□□□□ 0.24
PPP4R1-202ENST00000400555 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.55■□□□□ 0.24
PPP4R1-202ENST00000400555 BCL2L13Q9BXK5 485 aa16.55■□□□□ 0.24
PPP4R1-202ENST00000400555 ERBINQ96RT1 1412 aa16.54■□□□□ 0.24
PPP4R1-202ENST00000400555 CDCA8Q53HL2 280 aa16.54■□□□□ 0.24
PPP4R1-202ENST00000400555 BCAR3O75815 825 aa16.52■□□□□ 0.24
PPP4R1-202ENST00000400555 PRAG1Q86YV5 1406 aa16.52■□□□□ 0.24
PPP4R1-202ENST00000400555 ADGRL2O95490 1459 aa16.52■□□□□ 0.23
PPP4R1-202ENST00000400555 TMEM132EQ6IEE7 984 aa16.52■□□□□ 0.23
PPP4R1-202ENST00000400555 CLUAP1Q96AJ1 413 aa16.51■□□□□ 0.23
PPP4R1-202ENST00000400555 RNF123Q5XPI4 1314 aa16.51■□□□□ 0.23
PPP4R1-202ENST00000400555 FAM135AQ9P2D6 1515 aa16.51■□□□□ 0.23
PPP4R1-202ENST00000400555 ITSN2Q9NZM3 1697 aa16.51■□□□□ 0.23
PPP4R1-202ENST00000400555 MBD5Q9P267 1494 aa16.51■□□□□ 0.23
PPP4R1-202ENST00000400555 ARXQ96QS3 562 aa16.5■□□□□ 0.23
PPP4R1-202ENST00000400555 BACH2Q9BYV9 841 aa16.5■□□□□ 0.23
PPP4R1-202ENST00000400555 SYCP2Q9BX26 1530 aa16.5■□□□□ 0.23
PPP4R1-202ENST00000400555 KDM5CP41229 1560 aa16.5■□□□□ 0.23
PPP4R1-202ENST00000400555 LRPPRCP42704 1394 aaKnown RBP16.5■□□□□ 0.23
PPP4R1-202ENST00000400555 UHRF1BP1Q6BDS2 1440 aa16.5■□□□□ 0.23
PPP4R1-202ENST00000400555 STK26Q9P289 416 aa16.49■□□□□ 0.23
PPP4R1-202ENST00000400555 MORC1Q86VD1 984 aa16.49■□□□□ 0.23
PPP4R1-202ENST00000400555 PARD3Q8TEW0 1356 aa16.49■□□□□ 0.23
PPP4R1-202ENST00000400555 ABCC10Q5T3U5 1492 aa16.48■□□□□ 0.23
PPP4R1-202ENST00000400555 NUP160Q12769 1436 aa16.48■□□□□ 0.23
PPP4R1-202ENST00000400555 COG6Q9Y2V7 657 aa16.47■□□□□ 0.23
PPP4R1-202ENST00000400555 A2MP01023 1474 aa16.46■□□□□ 0.23
PPP4R1-202ENST00000400555 PANK1Q8TE04 598 aa16.45■□□□□ 0.22
PPP4R1-202ENST00000400555 SPINK5Q9NQ38 1064 aaPredicted RBP16.45■□□□□ 0.22
PPP4R1-202ENST00000400555 SLC12A5Q9H2X9 1139 aa16.45■□□□□ 0.22
PPP4R1-202ENST00000400555 NPM1P06748 294 aaKnown RBP eCLIP16.44■□□□□ 0.22
PPP4R1-202ENST00000400555 PPM1GO15355 546 aaPredicted RBP16.44■□□□□ 0.22
PPP4R1-202ENST00000400555 U2SURPO15042 1029 aaKnown RBP16.44■□□□□ 0.22
PPP4R1-202ENST00000400555 DUSP27Q5VZP5 1158 aa16.43■□□□□ 0.22
PPP4R1-202ENST00000400555 KANK1Q14678 1352 aa16.43■□□□□ 0.22
PPP4R1-202ENST00000400555 ADGRF5Q8IZF2 1346 aa16.43■□□□□ 0.22
PPP4R1-202ENST00000400555 PLEKHH1Q9ULM0 1364 aa16.43■□□□□ 0.22
PPP4R1-202ENST00000400555 PLA2R1Q13018 1463 aa16.43■□□□□ 0.22
PPP4R1-202ENST00000400555 AMER1Q5JTC6 1135 aaPredicted RBP16.42■□□□□ 0.22
PPP4R1-202ENST00000400555 SPRYD3Q8NCJ5 442 aa16.42■□□□□ 0.22
PPP4R1-202ENST00000400555 SCAPERQ9BY12 1400 aa16.42■□□□□ 0.22
PPP4R1-202ENST00000400555 TRAPPC8Q9Y2L5 1435 aa16.42■□□□□ 0.22
PPP4R1-202ENST00000400555 ADGBQ8N7X0 1667 aa16.41■□□□□ 0.22
PPP4R1-202ENST00000400555 DMRT2Q9Y5R5 561 aa16.41■□□□□ 0.22
PPP4R1-202ENST00000400555 U2AF1L5P0DN76 240 aaPredicted RBP16.4■□□□□ 0.22
PPP4R1-202ENST00000400555 U2AF1Q01081 240 aaKnown RBP eCLIP16.4■□□□□ 0.22
PPP4R1-202ENST00000400555 DDRGK1Q96HY6 314 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms