RNA–Protein interactions for RNA: ENST00000399953.7

NPRL3-201, Transcript of NPR3 like, GATOR1 complex subunit, humanhuman

TSL 1 (best) BASIC

Gene NPRL3, Length 2,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPRL3-201ENST00000399953 SMAP1Q8IYB5 467 aaPredicted RBP21.25■□□□□ 0.99
NPRL3-201ENST00000399953 NLRP13Q86W25 1043 aa21.24■□□□□ 0.99
NPRL3-201ENST00000399953 KDM5CP41229 1560 aa21.23■□□□□ 0.99
NPRL3-201ENST00000399953 THOC2Q8NI27 1593 aaKnown RBP21.23■□□□□ 0.99
NPRL3-201ENST00000399953 TERF1P54274 439 aa21.22■□□□□ 0.99
NPRL3-201ENST00000399953 CHIC2Q9UKJ5 165 aa21.22■□□□□ 0.99
NPRL3-201ENST00000399953 SUPT6HQ7KZ85 1726 aaKnown RBP21.22■□□□□ 0.99
NPRL3-201ENST00000399953 PLEKHH2Q8IVE3 1493 aa21.22■□□□□ 0.99
NPRL3-201ENST00000399953 NLRP1Q9C000 1473 aa21.2■□□□□ 0.99
NPRL3-201ENST00000399953 INSRP06213 1382 aa21.2■□□□□ 0.98
NPRL3-201ENST00000399953 RIPK4P57078 832 aa21.19■□□□□ 0.98
NPRL3-201ENST00000399953 SEC24BO95487 1268 aa21.19■□□□□ 0.98
NPRL3-201ENST00000399953 ZMYM4Q5VZL5 1548 aa21.19■□□□□ 0.98
NPRL3-201ENST00000399953 BLMP54132 1417 aaPredicted RBP21.18■□□□□ 0.98
NPRL3-201ENST00000399953 OFD1O75665 1012 aa21.18■□□□□ 0.98
NPRL3-201ENST00000399953 KIF14Q15058 1648 aa21.17■□□□□ 0.98
NPRL3-201ENST00000399953 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.17■□□□□ 0.98
NPRL3-201ENST00000399953 TBC1D2Q9BYX2 928 aa21.17■□□□□ 0.98
NPRL3-201ENST00000399953 MBD5Q9P267 1494 aa21.16■□□□□ 0.98
NPRL3-201ENST00000399953 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.16■□□□□ 0.98
NPRL3-201ENST00000399953 NESP48681 1621 aa21.16■□□□□ 0.98
NPRL3-201ENST00000399953 CFTRP13569 1480 aa21.16■□□□□ 0.98
NPRL3-201ENST00000399953 SNAPC4Q5SXM2 1469 aa21.16■□□□□ 0.98
NPRL3-201ENST00000399953 E9PCH4 1651 aa21.16■□□□□ 0.98
NPRL3-201ENST00000399953 TCOF1Q13428 1488 aaKnown RBP21.15■□□□□ 0.98
NPRL3-201ENST00000399953 PARD3Q8TEW0 1356 aa21.14■□□□□ 0.97
NPRL3-201ENST00000399953 UPF2Q9HAU5 1272 aaKnown RBP21.14■□□□□ 0.97
NPRL3-201ENST00000399953 FAM13BQ9NYF5 915 aa21.14■□□□□ 0.97
NPRL3-201ENST00000399953 DDX11L8A8MPP1 907 aa21.13■□□□□ 0.97
NPRL3-201ENST00000399953 EHBP1L1Q8N3D4 1523 aa21.13■□□□□ 0.97
NPRL3-201ENST00000399953 CHMP5Q9NZZ3 219 aa21.13■□□□□ 0.97
NPRL3-201ENST00000399953 MAPK8IP3Q9UPT6 1336 aa21.12■□□□□ 0.97
NPRL3-201ENST00000399953 MTERF4Q7Z6M4 381 aaKnown RBP21.12■□□□□ 0.97
NPRL3-201ENST00000399953 UGGT2Q9NYU1 1516 aa21.12■□□□□ 0.97
NPRL3-201ENST00000399953 HMGXB3Q12766 1538 aa21.11■□□□□ 0.97
NPRL3-201ENST00000399953 ZSCAN30Q86W11 494 aa21.11■□□□□ 0.97
NPRL3-201ENST00000399953 TBC1D32Q96NH3 1257 aa21.1■□□□□ 0.97
NPRL3-201ENST00000399953 EIF3AQ14152 1382 aaKnown RBP21.1■□□□□ 0.97
NPRL3-201ENST00000399953 CADPSQ9ULU8 1353 aa21.1■□□□□ 0.97
NPRL3-201ENST00000399953 LRRIQ1Q96JM4 1722 aa21.1■□□□□ 0.97
NPRL3-201ENST00000399953 CC2D2AQ9P2K1 1620 aa21.09■□□□□ 0.97
NPRL3-201ENST00000399953 UTP14CQ5TAP6 766 aaKnown RBP21.08■□□□□ 0.97
NPRL3-201ENST00000399953 CCDC173Q0VFZ6 552 aa21.08■□□□□ 0.97
NPRL3-201ENST00000399953 ZHX1Q9UKY1 873 aaPredicted RBP21.08■□□□□ 0.97
NPRL3-201ENST00000399953 ARHGEF11O15085 1522 aa21.08■□□□□ 0.96
NPRL3-201ENST00000399953 NCLP19338 710 aaKnown RBP21.07■□□□□ 0.96
NPRL3-201ENST00000399953 ZNF326Q5BKZ1 582 aaKnown RBP21.07■□□□□ 0.96
NPRL3-201ENST00000399953 MSNP26038 577 aaKnown RBP21.06■□□□□ 0.96
NPRL3-201ENST00000399953 RAD54L2Q9Y4B4 1467 aa21.06■□□□□ 0.96
NPRL3-201ENST00000399953 PDIA4P13667 645 aaKnown RBP21.06■□□□□ 0.96
NPRL3-201ENST00000399953 BCL11BQ9C0K0 894 aaPredicted RBP21.06■□□□□ 0.96
NPRL3-201ENST00000399953 SPRYD3Q8NCJ5 442 aa21.05■□□□□ 0.96
NPRL3-201ENST00000399953 BBXQ8WY36 941 aaPredicted RBP21.05■□□□□ 0.96
NPRL3-201ENST00000399953 SLC4A1APQ9BWU0 796 aaKnown RBP21.04■□□□□ 0.96
NPRL3-201ENST00000399953 PPP1R9BQ96SB3 815 aa21.04■□□□□ 0.96
NPRL3-201ENST00000399953 CTTNBP2Q8WZ74 1663 aa21.04■□□□□ 0.96
NPRL3-201ENST00000399953 DMTNQ08495 405 aa21.03■□□□□ 0.96
NPRL3-201ENST00000399953 DUSP27Q5VZP5 1158 aa21.03■□□□□ 0.96
NPRL3-201ENST00000399953 GAS2L3Q86XJ1 694 aa21.03■□□□□ 0.96
NPRL3-201ENST00000399953 RALGAPBQ86X10 1494 aa21.02■□□□□ 0.96
NPRL3-201ENST00000399953 R3HCC1Q9Y3T6 440 aaKnown RBP21.02■□□□□ 0.96
NPRL3-201ENST00000399953 IGHDP01880 384 aa21.02■□□□□ 0.95
NPRL3-201ENST00000399953 ARID3CA6NKF2 412 aa20.99■□□□□ 0.95
NPRL3-201ENST00000399953 PRDM10Q9NQV6 1147 aa20.99■□□□□ 0.95
NPRL3-201ENST00000399953 UQCRHLA0A096LP55 91 aa20.99■□□□□ 0.95
NPRL3-201ENST00000399953 UQCRHP07919 91 aa20.99■□□□□ 0.95
NPRL3-201ENST00000399953 GTF2E1P29083 439 aaPredicted RBP20.99■□□□□ 0.95
NPRL3-201ENST00000399953 ANP32BQ92688 251 aaKnown RBP20.98■□□□□ 0.95
NPRL3-201ENST00000399953 CARD11Q9BXL7 1154 aa20.98■□□□□ 0.95
NPRL3-201ENST00000399953 DYNC1I1O14576 645 aa20.98■□□□□ 0.95
NPRL3-201ENST00000399953 CANXP27824 592 aaKnown RBP20.97■□□□□ 0.95
NPRL3-201ENST00000399953 GRIN2BQ13224 1484 aa20.97■□□□□ 0.95
NPRL3-201ENST00000399953 ZMYM3Q14202 1370 aa20.97■□□□□ 0.95
NPRL3-201ENST00000399953 UHRF1BP1Q6BDS2 1440 aa20.97■□□□□ 0.95
NPRL3-201ENST00000399953 SKOR2Q2VWA4 1001 aaPredicted RBP20.96■□□□□ 0.95
NPRL3-201ENST00000399953 CCDC144AA2RUR9 1427 aa20.95■□□□□ 0.94
NPRL3-201ENST00000399953 ST20-MTHFSA0A0A6YYL1 179 aa20.95■□□□□ 0.94
NPRL3-201ENST00000399953 ZNF608Q9ULD9 1512 aaPredicted RBP20.95■□□□□ 0.94
NPRL3-201ENST00000399953 ROCK1Q13464 1354 aa20.94■□□□□ 0.94
NPRL3-201ENST00000399953 FANCD2Q9BXW9 1451 aa20.94■□□□□ 0.94
NPRL3-201ENST00000399953 NASPP49321 788 aaPredicted RBP20.94■□□□□ 0.94
NPRL3-201ENST00000399953 STAC3Q96MF2 364 aa20.94■□□□□ 0.94
NPRL3-201ENST00000399953 TNNT2P45379 298 aaPredicted RBP20.94■□□□□ 0.94
NPRL3-201ENST00000399953 GOLGA2Q08379 1002 aa20.94■□□□□ 0.94
NPRL3-201ENST00000399953 ARID3AQ99856 593 aa20.93■□□□□ 0.94
NPRL3-201ENST00000399953 PTMSP20962 102 aa20.93■□□□□ 0.94
NPRL3-201ENST00000399953 CCDC94Q9BW85 323 aaPredicted RBP20.93■□□□□ 0.94
NPRL3-201ENST00000399953 PLEKHH1Q9ULM0 1364 aa20.93■□□□□ 0.94
NPRL3-201ENST00000399953 ZSCAN20P17040 1043 aaPredicted RBP20.92■□□□□ 0.94
NPRL3-201ENST00000399953 NAP1L2Q9ULW6 460 aaPredicted RBP20.92■□□□□ 0.94
NPRL3-201ENST00000399953 TDRD9Q8NDG6 1382 aaKnown RBP20.92■□□□□ 0.94
NPRL3-201ENST00000399953 HS1BP3Q53T59 392 aa20.92■□□□□ 0.94
NPRL3-201ENST00000399953 ZNF692Q9BU19 519 aaPredicted RBP20.92■□□□□ 0.94
NPRL3-201ENST00000399953 ZNF500O60304 480 aaPredicted RBP20.91■□□□□ 0.94
NPRL3-201ENST00000399953 CGNL1Q0VF96 1302 aa20.91■□□□□ 0.94
NPRL3-201ENST00000399953 KIF21AQ7Z4S6 1674 aa20.91■□□□□ 0.94
NPRL3-201ENST00000399953 MAGI3Q5TCQ9 1506 aa20.9■□□□□ 0.94
NPRL3-201ENST00000399953 ZNF521Q96K83 1311 aa20.9■□□□□ 0.94
NPRL3-201ENST00000399953 PER1O15534 1290 aaPredicted RBP20.9■□□□□ 0.94
NPRL3-201ENST00000399953 GBP4Q96PP9 640 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms