RNA–Protein interactions for RNA: ENST00000399537.8

TNRC18-203, Transcript of trinucleotide repeat containing 18, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNRC18, Length 10,572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-203ENST00000399537 TRHP20396 242 aaPredicted RBP17.86■□□□□ 0.45
TNRC18-203ENST00000399537 TOMM22Q9NS69 142 aa17.86■□□□□ 0.45
TNRC18-203ENST00000399537 DDX11L8A8MPP1 907 aa17.85■□□□□ 0.45
TNRC18-203ENST00000399537 MARCH6O60337 910 aa17.85■□□□□ 0.45
TNRC18-203ENST00000399537 TPD52L1Q16890 204 aaPredicted RBP17.85■□□□□ 0.45
TNRC18-203ENST00000399537 HDAC5Q9UQL6 1122 aa17.85■□□□□ 0.45
TNRC18-203ENST00000399537 SLC4A10Q6U841 1118 aa17.84■□□□□ 0.45
TNRC18-203ENST00000399537 KANK4Q5T7N3 995 aaPredicted RBP17.84■□□□□ 0.45
TNRC18-203ENST00000399537 H3BQV1 296 aa17.83■□□□□ 0.45
TNRC18-203ENST00000399537 IFFO2Q5TF58 517 aa17.83■□□□□ 0.45
TNRC18-203ENST00000399537 TSR1Q2NL82 804 aaKnown RBP17.83■□□□□ 0.45
TNRC18-203ENST00000399537 CCAR2Q8N163 923 aaKnown RBP17.83■□□□□ 0.44
TNRC18-203ENST00000399537 KIF3AQ9Y496 699 aa17.83■□□□□ 0.44
TNRC18-203ENST00000399537 SF3A1Q15459 793 aaKnown RBP17.82■□□□□ 0.44
TNRC18-203ENST00000399537 CENPJQ9HC77 1338 aaPredicted RBP17.82■□□□□ 0.44
TNRC18-203ENST00000399537 CCDC88BA6NC98 1476 aa17.82■□□□□ 0.44
TNRC18-203ENST00000399537 CCDC9Q9Y3X0 531 aaKnown RBP17.82■□□□□ 0.44
TNRC18-203ENST00000399537 FMN1Q68DA7 1419 aa17.81■□□□□ 0.44
TNRC18-203ENST00000399537 CCDC146Q8IYE0 955 aa17.8■□□□□ 0.44
TNRC18-203ENST00000399537 CECR2Q9BXF3 1484 aa17.8■□□□□ 0.44
TNRC18-203ENST00000399537 PHLDB1Q86UU1 1377 aa17.8■□□□□ 0.44
TNRC18-203ENST00000399537 KIF15Q9NS87 1388 aa17.8■□□□□ 0.44
TNRC18-203ENST00000399537 CCDC70Q6NSX1 233 aa17.8■□□□□ 0.44
TNRC18-203ENST00000399537 TPM2P07951 284 aa17.79■□□□□ 0.44
TNRC18-203ENST00000399537 FRAT2O75474 233 aaPredicted RBP17.79■□□□□ 0.44
TNRC18-203ENST00000399537 TPM1P09493 284 aa17.78■□□□□ 0.44
TNRC18-203ENST00000399537 GGT6Q6P531 493 aa17.78■□□□□ 0.44
TNRC18-203ENST00000399537 NUP155O75694 1391 aa17.78■□□□□ 0.44
TNRC18-203ENST00000399537 PATL2C9JE40 543 aaKnown RBP17.78■□□□□ 0.44
TNRC18-203ENST00000399537 LMOD3Q0VAK6 560 aa17.78■□□□□ 0.44
TNRC18-203ENST00000399537 TERF2IPQ9NYB0 399 aa17.78■□□□□ 0.44
TNRC18-203ENST00000399537 TCEAL9Q9UHQ7 104 aa17.78■□□□□ 0.44
TNRC18-203ENST00000399537 PRDM2Q13029 1718 aa17.77■□□□□ 0.44
TNRC18-203ENST00000399537 GOLGA6L19H0YKK7 550 aa17.75■□□□□ 0.43
TNRC18-203ENST00000399537 PDE3BQ13370 1112 aa17.75■□□□□ 0.43
TNRC18-203ENST00000399537 NLRP13Q86W25 1043 aa17.75■□□□□ 0.43
TNRC18-203ENST00000399537 FBXO3Q9UK99 471 aa17.75■□□□□ 0.43
TNRC18-203ENST00000399537 MPHOSPH9Q99550 1183 aa17.75■□□□□ 0.43
TNRC18-203ENST00000399537 AKAP17AQ02040 695 aaKnown RBP17.74■□□□□ 0.43
TNRC18-203ENST00000399537 ANKRD30AQ9BXX3 1397 aa17.74■□□□□ 0.43
TNRC18-203ENST00000399537 TOP2AP11388 1531 aaKnown RBP17.74■□□□□ 0.43
TNRC18-203ENST00000399537 CLUAP1Q96AJ1 413 aa17.74■□□□□ 0.43
TNRC18-203ENST00000399537 SMARCA2P51531 1590 aa17.74■□□□□ 0.43
TNRC18-203ENST00000399537 MCTP1Q6DN14 999 aa17.73■□□□□ 0.43
TNRC18-203ENST00000399537 GTF2E1P29083 439 aaPredicted RBP17.72■□□□□ 0.43
TNRC18-203ENST00000399537 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.72■□□□□ 0.436e-8■■□□□ 13.2
TNRC18-203ENST00000399537 CARMIL2Q6F5E8 1435 aa17.71■□□□□ 0.43
TNRC18-203ENST00000399537 ATP6V1DQ9Y5K8 247 aa17.71■□□□□ 0.43
TNRC18-203ENST00000399537 GPS2Q13227 327 aa17.71■□□□□ 0.43
TNRC18-203ENST00000399537 ZBED9Q6R2W3 1325 aa17.71■□□□□ 0.43
TNRC18-203ENST00000399537 LTV1Q96GA3 475 aaPredicted RBP17.71■□□□□ 0.43
TNRC18-203ENST00000399537 MROH2BQ7Z745 1585 aa17.71■□□□□ 0.43
TNRC18-203ENST00000399537 FAM184AQ8NB25 1140 aa17.71■□□□□ 0.42
TNRC18-203ENST00000399537 AMPHP49418 695 aa17.7■□□□□ 0.42
TNRC18-203ENST00000399537 GSE1Q14687 1217 aa17.7■□□□□ 0.42
TNRC18-203ENST00000399537 FAM161AQ3B820 660 aa17.7■□□□□ 0.42
TNRC18-203ENST00000399537 CENPQQ7L2Z9 268 aaPredicted RBP17.7■□□□□ 0.42
TNRC18-203ENST00000399537 RILPL2Q969X0 211 aa17.7■□□□□ 0.42
TNRC18-203ENST00000399537 BECN2A8MW95 431 aa17.69■□□□□ 0.42
TNRC18-203ENST00000399537 PDE4AP27815 886 aa17.69■□□□□ 0.42
TNRC18-203ENST00000399537 FOXD4L6Q3SYB3 417 aaPredicted RBP17.69■□□□□ 0.42
TNRC18-203ENST00000399537 FOXD4L3Q6VB84 417 aaPredicted RBP17.69■□□□□ 0.42
TNRC18-203ENST00000399537 CCDC18Q5T9S5 1454 aa17.69■□□□□ 0.42
TNRC18-203ENST00000399537 NGDNQ8NEJ9 315 aaKnown RBP17.68■□□□□ 0.42
TNRC18-203ENST00000399537 ZNF592Q92610 1267 aa17.68■□□□□ 0.42
TNRC18-203ENST00000399537 ZNF771Q7L3S4 317 aaPredicted RBP17.68■□□□□ 0.42
TNRC18-203ENST00000399537 MYBBP1AQ9BQG0 1328 aaKnown RBP17.68■□□□□ 0.42
TNRC18-203ENST00000399537 SLC4A3P48751 1232 aa17.68■□□□□ 0.42
TNRC18-203ENST00000399537 TRIM34Q9BYJ4 488 aa17.68■□□□□ 0.42
TNRC18-203ENST00000399537 PCMTD1Q96MG8 357 aaPredicted RBP17.67■□□□□ 0.42
TNRC18-203ENST00000399537 FANCIQ9NVI1 1328 aa17.67■□□□□ 0.42
TNRC18-203ENST00000399537 WWC1Q8IX03 1113 aa17.67■□□□□ 0.42
TNRC18-203ENST00000399537 FHOD3Q2V2M9 1422 aa17.66■□□□□ 0.42
TNRC18-203ENST00000399537 RRP1P56182 461 aaKnown RBP17.66■□□□□ 0.42
TNRC18-203ENST00000399537 CHMP4CQ96CF2 233 aa17.66■□□□□ 0.42
TNRC18-203ENST00000399537 SKOR2Q2VWA4 1001 aaPredicted RBP17.65■□□□□ 0.42
TNRC18-203ENST00000399537 VSIG10Q8N0Z9 540 aa17.65■□□□□ 0.42
TNRC18-203ENST00000399537 DIAPH3Q9NSV4 1193 aa17.65■□□□□ 0.42
TNRC18-203ENST00000399537 EID1Q9Y6B2 187 aa17.65■□□□□ 0.42
TNRC18-203ENST00000399537 NOL10Q9BSC4 688 aaKnown RBP17.65■□□□□ 0.42
TNRC18-203ENST00000399537 SYNE3Q6ZMZ3 975 aa17.64■□□□□ 0.41
TNRC18-203ENST00000399537 RRP7AQ9Y3A4 280 aaKnown RBP17.64■□□□□ 0.41
TNRC18-203ENST00000399537 L3MBTL2Q969R5 705 aa17.64■□□□□ 0.41
TNRC18-203ENST00000399537 PLIN1O60240 522 aa17.64■□□□□ 0.41
TNRC18-203ENST00000399537 ANKRD20A12PQ8NF67 263 aa17.64■□□□□ 0.41
TNRC18-203ENST00000399537 IPO7O95373 1038 aaKnown RBP17.63■□□□□ 0.41
TNRC18-203ENST00000399537 RAD21O60216 631 aa17.63■□□□□ 0.41
TNRC18-203ENST00000399537 NUTM2DQ5VT03 806 aaPredicted RBP17.63■□□□□ 0.41
TNRC18-203ENST00000399537 DDX49Q9Y6V7 483 aaKnown RBP17.63■□□□□ 0.41
TNRC18-203ENST00000399537 AMOTL1Q8IY63 956 aa17.63■□□□□ 0.41
TNRC18-203ENST00000399537 CALRP27797 417 aaKnown RBP17.62■□□□□ 0.41
TNRC18-203ENST00000399537 TEX35Q5T0J7 233 aa17.62■□□□□ 0.41
TNRC18-203ENST00000399537 CTDP1Q9Y5B0 961 aaPredicted RBP17.62■□□□□ 0.41
TNRC18-203ENST00000399537 USP47Q96K76 1375 aa17.62■□□□□ 0.41
TNRC18-203ENST00000399537 LRRFIP1Q32MZ4 808 aaKnown RBP17.62■□□□□ 0.41
TNRC18-203ENST00000399537 TRIM29Q14134 588 aa17.62■□□□□ 0.41
TNRC18-203ENST00000399537 ANKRD45Q5TZF3 282 aa17.61■□□□□ 0.41
TNRC18-203ENST00000399537 CNKSR2Q8WXI2 1034 aa17.61■□□□□ 0.41
TNRC18-203ENST00000399537 HOOK1Q9UJC3 728 aaKnown RBP17.61■□□□□ 0.41
TNRC18-203ENST00000399537 RAPGEF2Q9Y4G8 1499 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms