RNA–Protein interactions for RNA: ENST00000399196.1

LINC00243-201, long intergenic non-protein coding RNA 243, humanhuman

TSL 2 BASIC

Gene LINC00243, Length 2,052 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00243-201ENST00000399196 TONSLQ96HA7 1378 aa13.57□□□□□ -0.24
LINC00243-201ENST00000399196 ANKRD30BQ9BXX2 1392 aa13.56□□□□□ -0.24
LINC00243-201ENST00000399196 SPAG9O60271 1321 aaKnown RBP13.56□□□□□ -0.24
LINC00243-201ENST00000399196 KIDINS220Q9ULH0 1771 aa13.55□□□□□ -0.24
LINC00243-201ENST00000399196 MIER1Q8N108 512 aa13.55□□□□□ -0.24
LINC00243-201ENST00000399196 ATP7AQ04656 1500 aa13.55□□□□□ -0.24
LINC00243-201ENST00000399196 MYT1LQ9UL68 1186 aa13.54□□□□□ -0.24
LINC00243-201ENST00000399196 NUP155O75694 1391 aa13.54□□□□□ -0.24
LINC00243-201ENST00000399196 PLXNC1O60486 1568 aa13.53□□□□□ -0.24
LINC00243-201ENST00000399196 HECW2Q9P2P5 1572 aa13.53□□□□□ -0.24
LINC00243-201ENST00000399196 ZMYM4Q5VZL5 1548 aa13.52□□□□□ -0.25
LINC00243-201ENST00000399196 ABCA6Q8N139 1617 aa13.51□□□□□ -0.25
LINC00243-201ENST00000399196 RTEL1-TNFRSF6BF6WH68 1400 aa13.51□□□□□ -0.25
LINC00243-201ENST00000399196 MLH3Q9UHC1 1453 aa13.51□□□□□ -0.25
LINC00243-201ENST00000399196 DUOX2Q9NRD8 1548 aa13.51□□□□□ -0.25
LINC00243-201ENST00000399196 HIRIP3Q9BW71 556 aaPredicted RBP13.51□□□□□ -0.25
LINC00243-201ENST00000399196 YEATS2Q9ULM3 1422 aa13.5□□□□□ -0.25
LINC00243-201ENST00000399196 RPRD2Q5VT52 1461 aaKnown RBP13.5□□□□□ -0.25
LINC00243-201ENST00000399196 PKD2Q13563 968 aa13.49□□□□□ -0.25
LINC00243-201ENST00000399196 DIP2CQ9Y2E4 1556 aa13.49□□□□□ -0.25
LINC00243-201ENST00000399196 L3MBTL2Q969R5 705 aa13.49□□□□□ -0.25
LINC00243-201ENST00000399196 ERBINQ96RT1 1412 aa13.49□□□□□ -0.25
LINC00243-201ENST00000399196 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.48□□□□□ -0.25
LINC00243-201ENST00000399196 KDM5DQ9BY66 1539 aa13.48□□□□□ -0.25
LINC00243-201ENST00000399196 SIGLEC1Q9BZZ2 1709 aa13.45□□□□□ -0.26
LINC00243-201ENST00000399196 ARHGEF40Q8TER5 1519 aa13.44□□□□□ -0.26
LINC00243-201ENST00000399196 FAM135AQ9P2D6 1515 aa13.44□□□□□ -0.26
LINC00243-201ENST00000399196 UNC13BO14795 1591 aa13.44□□□□□ -0.26
LINC00243-201ENST00000399196 MAGI2Q86UL8 1455 aa13.43□□□□□ -0.26
LINC00243-201ENST00000399196 NBPF8Q3BBV2 869 aa13.43□□□□□ -0.26
LINC00243-201ENST00000399196 A2MP01023 1474 aa13.43□□□□□ -0.26
LINC00243-201ENST00000399196 DHX29Q7Z478 1369 aaKnown RBP13.42□□□□□ -0.26
LINC00243-201ENST00000399196 KIF3BO15066 747 aa13.4□□□□□ -0.27
LINC00243-201ENST00000399196 EIF2AK4Q9P2K8 1649 aaKnown RBP13.39□□□□□ -0.27
LINC00243-201ENST00000399196 ATP10AO60312 1499 aa13.39□□□□□ -0.27
LINC00243-201ENST00000399196 ARXQ96QS3 562 aa13.39□□□□□ -0.27
LINC00243-201ENST00000399196 IQGAP3Q86VI3 1631 aa13.39□□□□□ -0.27
LINC00243-201ENST00000399196 MROH1Q8NDA8 1641 aa13.39□□□□□ -0.27
LINC00243-201ENST00000399196 DDX10Q13206 875 aaKnown RBP13.38□□□□□ -0.27
LINC00243-201ENST00000399196 DEPDC5O75140 1603 aa13.38□□□□□ -0.27
LINC00243-201ENST00000399196 KANK1Q14678 1352 aa13.38□□□□□ -0.27
LINC00243-201ENST00000399196 REREQ9P2R6 1566 aa13.38□□□□□ -0.27
LINC00243-201ENST00000399196 BCORL1Q5H9F3 1711 aa13.37□□□□□ -0.27
LINC00243-201ENST00000399196 RNF17Q9BXT8 1623 aaKnown RBP13.36□□□□□ -0.27
LINC00243-201ENST00000399196 PLA2R1Q13018 1463 aa13.36□□□□□ -0.27
LINC00243-201ENST00000399196 HSPA5P11021 654 aaKnown RBP13.35□□□□□ -0.27
LINC00243-201ENST00000399196 PRDM15P57071 1507 aaPredicted RBP13.34□□□□□ -0.27
LINC00243-201ENST00000399196 CCDC144AA2RUR9 1427 aa13.34□□□□□ -0.27
LINC00243-201ENST00000399196 YTHDC1Q96MU7 727 aaKnown RBP13.33□□□□□ -0.27
LINC00243-201ENST00000399196 VWDEQ8N2E2 1590 aa13.33□□□□□ -0.28
LINC00243-201ENST00000399196 AGLP35573 1532 aa13.33□□□□□ -0.28
LINC00243-201ENST00000399196 SPATA31E1Q6ZUB1 1445 aa13.3□□□□□ -0.28
LINC00243-201ENST00000399196 C11orf95C9JLR9 678 aaPredicted RBP13.3□□□□□ -0.28
LINC00243-201ENST00000399196 CEP152O94986 1710 aa13.3□□□□□ -0.28
LINC00243-201ENST00000399196 WASHC2AQ641Q2 1341 aa13.3□□□□□ -0.28
LINC00243-201ENST00000399196 GGT6Q6P531 493 aa13.3□□□□□ -0.28
LINC00243-201ENST00000399196 EIF4G2P78344 907 aaKnown RBP eCLIP13.29□□□□□ -0.28
LINC00243-201ENST00000399196 ZNF326Q5BKZ1 582 aaKnown RBP13.29□□□□□ -0.28
LINC00243-201ENST00000399196 E9PCH4 1651 aa13.28□□□□□ -0.28
LINC00243-201ENST00000399196 TET3O43151 1660 aa13.28□□□□□ -0.28
LINC00243-201ENST00000399196 UHRF1BP1Q6BDS2 1440 aa13.28□□□□□ -0.28
LINC00243-201ENST00000399196 ABCC3O15438 1527 aa13.27□□□□□ -0.28
LINC00243-201ENST00000399196 MLECQ14165 292 aa13.27□□□□□ -0.28
LINC00243-201ENST00000399196 RGL3Q3MIN7 710 aa13.26□□□□□ -0.29
LINC00243-201ENST00000399196 DCAF11Q8TEB1 546 aa13.26□□□□□ -0.29
LINC00243-201ENST00000399196 KDM2AQ9Y2K7 1162 aa13.26□□□□□ -0.29
LINC00243-201ENST00000399196 SCAF1Q9H7N4 1312 aaKnown RBP13.26□□□□□ -0.29
LINC00243-201ENST00000399196 LMTK2Q8IWU2 1503 aa13.25□□□□□ -0.29
LINC00243-201ENST00000399196 ARID4BQ4LE39 1312 aaPredicted RBP13.24□□□□□ -0.29
LINC00243-201ENST00000399196 WASHC2CQ9Y4E1 1318 aa13.24□□□□□ -0.29
LINC00243-201ENST00000399196 EFCAB6Q5THR3 1501 aa13.24□□□□□ -0.29
LINC00243-201ENST00000399196 CAMSAP1Q5T5Y3 1602 aa13.24□□□□□ -0.29
LINC00243-201ENST00000399196 CLTCQ00610 1675 aaKnown RBP13.24□□□□□ -0.29
LINC00243-201ENST00000399196 ZC3H13Q5T200 1668 aaKnown RBP13.23□□□□□ -0.29
LINC00243-201ENST00000399196 RALGAPBQ86X10 1494 aa13.23□□□□□ -0.29
LINC00243-201ENST00000399196 TRPM2O94759 1503 aa13.22□□□□□ -0.29
LINC00243-201ENST00000399196 CENPBP07199 599 aaPredicted RBP13.22□□□□□ -0.29
LINC00243-201ENST00000399196 MYT1Q01538 1121 aa13.22□□□□□ -0.29
LINC00243-201ENST00000399196 TAOK2Q9UL54 1235 aa13.22□□□□□ -0.29
LINC00243-201ENST00000399196 PTPRTO14522 1441 aa13.22□□□□□ -0.29
LINC00243-201ENST00000399196 SPHKAPQ2M3C7 1700 aa13.22□□□□□ -0.29
LINC00243-201ENST00000399196 CCDC7Q96M83 1385 aa13.21□□□□□ -0.29
LINC00243-201ENST00000399196 POLR1AO95602 1720 aaPredicted RBP13.21□□□□□ -0.29
LINC00243-201ENST00000399196 NPATQ14207 1427 aa13.21□□□□□ -0.29
LINC00243-201ENST00000399196 USP47Q96K76 1375 aa13.21□□□□□ -0.3
LINC00243-201ENST00000399196 PRAG1Q86YV5 1406 aa13.19□□□□□ -0.3
LINC00243-201ENST00000399196 KIF7Q2M1P5 1343 aa13.19□□□□□ -0.3
LINC00243-201ENST00000399196 TRPM1Q7Z4N2 1603 aa13.19□□□□□ -0.3
LINC00243-201ENST00000399196 FER1L4A9Z1Z3 1794 aa13.18□□□□□ -0.3
LINC00243-201ENST00000399196 CLTCL1P53675 1640 aa13.18□□□□□ -0.3
LINC00243-201ENST00000399196 MADDQ8WXG6 1647 aa13.18□□□□□ -0.3
LINC00243-201ENST00000399196 CFAP65Q6ZU64 1925 aaKnown RBP13.17□□□□□ -0.3
LINC00243-201ENST00000399196 UGGT1Q9NYU2 1555 aa13.17□□□□□ -0.3
LINC00243-201ENST00000399196 ADAMTSL3P82987 1691 aa13.17□□□□□ -0.3
LINC00243-201ENST00000399196 NBPF1Q3BBV0 1214 aa13.16□□□□□ -0.3
LINC00243-201ENST00000399196 CARD11Q9BXL7 1154 aa13.16□□□□□ -0.3
LINC00243-201ENST00000399196 ARHGAP31Q2M1Z3 1444 aa13.16□□□□□ -0.3
LINC00243-201ENST00000399196 CNTLNQ9NXG0 1405 aa13.16□□□□□ -0.3
LINC00243-201ENST00000399196 PPP6R1Q9UPN7 881 aa13.16□□□□□ -0.3
LINC00243-201ENST00000399196 ROCK2O75116 1388 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms