RNA–Protein interactions for RNA: ENST00000396634.5

HLA-A-204, Transcript of major histocompatibility complex, class I, A, humanhuman

APPRIS P1 BASIC

Gene HLA-A, Length 1,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-204ENST00000396634 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.89■■□□□ 1.73
HLA-A-204ENST00000396634 RNF17Q9BXT8 1623 aaKnown RBP25.89■■□□□ 1.73
HLA-A-204ENST00000396634 ADAMTSL3P82987 1691 aa25.88■■□□□ 1.73
HLA-A-204ENST00000396634 DEPDC5O75140 1603 aa25.86■■□□□ 1.73
HLA-A-204ENST00000396634 RIMS1Q86UR5 1692 aaKnown RBP25.85■■□□□ 1.73
HLA-A-204ENST00000396634 KDM4FA0A1W2PPD8 638 aa25.85■■□□□ 1.73
HLA-A-204ENST00000396634 CEP152O94986 1710 aa25.84■■□□□ 1.73
HLA-A-204ENST00000396634 CLTCQ00610 1675 aaKnown RBP25.84■■□□□ 1.73
HLA-A-204ENST00000396634 PLPPR3Q6T4P5 718 aa25.83■■□□□ 1.72
HLA-A-204ENST00000396634 PCGF6Q9BYE7 350 aa25.82■■□□□ 1.72
HLA-A-204ENST00000396634 PRDM15P57071 1507 aaPredicted RBP25.81■■□□□ 1.72
HLA-A-204ENST00000396634 SETD5Q9C0A6 1442 aa25.81■■□□□ 1.72
HLA-A-204ENST00000396634 UNC13BO14795 1591 aa25.81■■□□□ 1.72
HLA-A-204ENST00000396634 RAB3GAP2Q9H2M9 1393 aa25.8■■□□□ 1.72
HLA-A-204ENST00000396634 ABCC3O15438 1527 aa25.75■■□□□ 1.71
HLA-A-204ENST00000396634 KDM5DQ9BY66 1539 aa25.75■■□□□ 1.71
HLA-A-204ENST00000396634 WASHC2CQ9Y4E1 1318 aa25.75■■□□□ 1.71
HLA-A-204ENST00000396634 CFAP65Q6ZU64 1925 aaKnown RBP25.74■■□□□ 1.71
HLA-A-204ENST00000396634 CEBPAP49715 358 aaPredicted RBP25.73■■□□□ 1.71
HLA-A-204ENST00000396634 TRIM52Q96A61 297 aa25.73■■□□□ 1.71
HLA-A-204ENST00000396634 ESF1Q9H501 851 aaKnown RBP25.73■■□□□ 1.71
HLA-A-204ENST00000396634 NUP155O75694 1391 aa25.73■■□□□ 1.71
HLA-A-204ENST00000396634 VWDEQ8N2E2 1590 aa25.72■■□□□ 1.71
HLA-A-204ENST00000396634 CAMSAP1Q5T5Y3 1602 aa25.71■■□□□ 1.71
HLA-A-204ENST00000396634 C3P01024 1663 aa25.71■■□□□ 1.71
HLA-A-204ENST00000396634 IQGAP3Q86VI3 1631 aa25.7■■□□□ 1.7
HLA-A-204ENST00000396634 ZC3H13Q5T200 1668 aaKnown RBP25.7■■□□□ 1.7
HLA-A-204ENST00000396634 KANK1Q14678 1352 aa25.69■■□□□ 1.7
HLA-A-204ENST00000396634 PTPRMP28827 1452 aa25.69■■□□□ 1.7
HLA-A-204ENST00000396634 FAM135AQ9P2D6 1515 aa25.69■■□□□ 1.7
HLA-A-204ENST00000396634 HRCP23327 699 aa25.68■■□□□ 1.7
HLA-A-204ENST00000396634 MROH2AA6NES4 1674 aa25.67■■□□□ 1.7
HLA-A-204ENST00000396634 ZMYM3Q14202 1370 aa25.65■■□□□ 1.7
HLA-A-204ENST00000396634 PZPP20742 1482 aa25.65■■□□□ 1.7
HLA-A-204ENST00000396634 CNTLNQ9NXG0 1405 aa25.64■■□□□ 1.69
HLA-A-204ENST00000396634 TET3O43151 1660 aa25.63■■□□□ 1.69
HLA-A-204ENST00000396634 EFCAB6Q5THR3 1501 aa25.62■■□□□ 1.69
HLA-A-204ENST00000396634 E9PCH4 1651 aa25.62■■□□□ 1.69
HLA-A-204ENST00000396634 FBXO31Q5XUX0 539 aaPredicted RBP25.62■■□□□ 1.69
HLA-A-204ENST00000396634 PPP6R1Q9UPN7 881 aa25.62■■□□□ 1.69
HLA-A-204ENST00000396634 LMTK2Q8IWU2 1503 aa25.61■■□□□ 1.69
HLA-A-204ENST00000396634 NPATQ14207 1427 aa25.6■■□□□ 1.69
HLA-A-204ENST00000396634 FOXD1Q16676 465 aa25.58■■□□□ 1.69
HLA-A-204ENST00000396634 SLC4A1APQ9BWU0 796 aaKnown RBP25.57■■□□□ 1.68
HLA-A-204ENST00000396634 PREX1Q8TCU6 1659 aa25.55■■□□□ 1.68
HLA-A-204ENST00000396634 PKD2Q13563 968 aa25.53■■□□□ 1.68
HLA-A-204ENST00000396634 MPHOSPH9Q99550 1183 aa25.53■■□□□ 1.68
HLA-A-204ENST00000396634 ERVK-7P63135 1459 aa25.5■■□□□ 1.67
HLA-A-204ENST00000396634 ARHGAP31Q2M1Z3 1444 aa25.5■■□□□ 1.67
HLA-A-204ENST00000396634 SYNMO15061 1565 aa25.48■■□□□ 1.67
HLA-A-204ENST00000396634 UGGT1Q9NYU2 1555 aa25.48■■□□□ 1.67
HLA-A-204ENST00000396634 SPATA31D1Q6ZQQ2 1576 aa25.47■■□□□ 1.67
HLA-A-204ENST00000396634 SPHKAPQ2M3C7 1700 aa25.47■■□□□ 1.67
HLA-A-204ENST00000396634 PELP1Q8IZL8 1130 aaKnown RBP25.45■■□□□ 1.67
HLA-A-204ENST00000396634 MYO3AQ8NEV4 1616 aa25.44■■□□□ 1.66
HLA-A-204ENST00000396634 RPRD2Q5VT52 1461 aaKnown RBP25.44■■□□□ 1.66
HLA-A-204ENST00000396634 TNRQ92752 1358 aa25.44■■□□□ 1.66
HLA-A-204ENST00000396634 NOS1P29475 1434 aa25.42■■□□□ 1.66
HLA-A-204ENST00000396634 AEBP2Q6ZN18 517 aaPredicted RBP25.4■■□□□ 1.66
HLA-A-204ENST00000396634 PLA2R1Q13018 1463 aa25.4■■□□□ 1.66
HLA-A-204ENST00000396634 SETD1BQ9UPS6 1966 aaKnown RBP25.4■■□□□ 1.66
HLA-A-204ENST00000396634 DHX57Q6P158 1386 aaKnown RBP25.38■■□□□ 1.65
HLA-A-204ENST00000396634 PIK3C2BO00750 1634 aa25.36■■□□□ 1.65
HLA-A-204ENST00000396634 CLTCL1P53675 1640 aa25.36■■□□□ 1.65
HLA-A-204ENST00000396634 TRPM2O94759 1503 aa25.35■■□□□ 1.65
HLA-A-204ENST00000396634 PTPRTO14522 1441 aa25.35■■□□□ 1.65
HLA-A-204ENST00000396634 MYO5BQ9ULV0 1848 aa25.34■■□□□ 1.65
HLA-A-204ENST00000396634 CEP170BQ9Y4F5 1589 aaPredicted RBP25.34■■□□□ 1.65
HLA-A-204ENST00000396634 ACIN1Q9UKV3 1341 aaKnown RBP25.34■■□□□ 1.65
HLA-A-204ENST00000396634 UHRF1BP1Q6BDS2 1440 aa25.33■■□□□ 1.65
HLA-A-204ENST00000396634 IDI1Q13907 227 aa25.33■■□□□ 1.65
HLA-A-204ENST00000396634 LMTK3Q96Q04 1460 aa25.32■■□□□ 1.64
HLA-A-204ENST00000396634 ZNF142P52746 1687 aaPredicted RBP25.32■■□□□ 1.64
HLA-A-204ENST00000396634 HSPA2P54652 639 aa25.3■■□□□ 1.64
HLA-A-204ENST00000396634 UBR1Q8IWV7 1749 aa25.29■■□□□ 1.64
HLA-A-204ENST00000396634 CHGAP10645 457 aaKnown RBP25.28■■□□□ 1.64
HLA-A-204ENST00000396634 NLRP1Q9C000 1473 aa25.28■■□□□ 1.64
HLA-A-204ENST00000396634 ANKRD30BQ9BXX2 1392 aa25.28■■□□□ 1.64
HLA-A-204ENST00000396634 A2ML1A8K2U0 1454 aa25.28■■□□□ 1.64
HLA-A-204ENST00000396634 CCDC144AA2RUR9 1427 aa25.25■■□□□ 1.63
HLA-A-204ENST00000396634 TMEM131LA2VDJ0 1609 aa25.24■■□□□ 1.63
HLA-A-204ENST00000396634 KIF1BO60333 1816 aa25.24■■□□□ 1.63
HLA-A-204ENST00000396634 ADGRB3O60242 1522 aa25.24■■□□□ 1.63
HLA-A-204ENST00000396634 SLC52A1Q9NWF4 448 aa25.23■■□□□ 1.63
HLA-A-204ENST00000396634 STAG3Q9UJ98 1225 aa25.23■■□□□ 1.63
HLA-A-204ENST00000396634 SIN3AQ96ST3 1273 aa25.21■■□□□ 1.63
HLA-A-204ENST00000396634 SENP3Q9H4L4 574 aaPredicted RBP25.19■■□□□ 1.62
HLA-A-204ENST00000396634 NUTM2DQ5VT03 806 aaPredicted RBP25.17■■□□□ 1.62
HLA-A-204ENST00000396634 RGL3Q3MIN7 710 aa25.16■■□□□ 1.62
HLA-A-204ENST00000396634 NEUROD1Q13562 356 aa25.15■■□□□ 1.62
HLA-A-204ENST00000396634 CCER1Q8TC90 406 aaPredicted RBP25.15■■□□□ 1.62
HLA-A-204ENST00000396634 KDM5AP29375 1690 aaKnown RBP25.15■■□□□ 1.62
HLA-A-204ENST00000396634 ZNF326Q5BKZ1 582 aaKnown RBP25.13■■□□□ 1.61
HLA-A-204ENST00000396634 SPATA31E1Q6ZUB1 1445 aa25.12■■□□□ 1.61
HLA-A-204ENST00000396634 THEMISQ8N1K5 641 aaPredicted RBP25.11■■□□□ 1.61
HLA-A-204ENST00000396634 STRCQ7RTU9 1775 aa25.11■■□□□ 1.61
HLA-A-204ENST00000396634 TMEM2Q9UHN6 1383 aa25.09■■□□□ 1.61
HLA-A-204ENST00000396634 NCKAP5LQ9HCH0 1330 aa25.09■■□□□ 1.61
HLA-A-204ENST00000396634 POLR1AO95602 1720 aaPredicted RBP25.09■■□□□ 1.61
HLA-A-204ENST00000396634 LTKP29376 864 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms