RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 AGLP35573 1532 aa28.23■■■□□ 2.11
LMNB1-202ENST00000395354 SIGLEC1Q9BZZ2 1709 aa28.22■■■□□ 2.11
LMNB1-202ENST00000395354 EIF2AK4Q9P2K8 1649 aaKnown RBP28.2■■■□□ 2.11
LMNB1-202ENST00000395354 GGT6Q6P531 493 aa28.2■■■□□ 2.1
LMNB1-202ENST00000395354 MLECQ14165 292 aa28.18■■■□□ 2.1
LMNB1-202ENST00000395354 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.16■■■□□ 2.15e-7■■□□□ 14.1
LMNB1-202ENST00000395354 BCORL1Q5H9F3 1711 aa28.15■■■□□ 2.1
LMNB1-202ENST00000395354 TRIM52Q96A61 297 aa28.13■■■□□ 2.09
LMNB1-202ENST00000395354 RNF17Q9BXT8 1623 aaKnown RBP28.1■■■□□ 2.09
LMNB1-202ENST00000395354 NUP155O75694 1391 aa28.1■■■□□ 2.09
LMNB1-202ENST00000395354 DEPDC5O75140 1603 aa28.08■■■□□ 2.09
LMNB1-202ENST00000395354 KANK1Q14678 1352 aa28.07■■■□□ 2.08
LMNB1-202ENST00000395354 PPP6R1Q9UPN7 881 aa28.07■■■□□ 2.08
LMNB1-202ENST00000395354 UNC13BO14795 1591 aa28.07■■■□□ 2.08
LMNB1-202ENST00000395354 MROH1Q8NDA8 1641 aa28.06■■■□□ 2.08
LMNB1-202ENST00000395354 WASHC2CQ9Y4E1 1318 aa28.05■■■□□ 2.08
LMNB1-202ENST00000395354 PRDM15P57071 1507 aaPredicted RBP28.04■■■□□ 2.08
LMNB1-202ENST00000395354 ESF1Q9H501 851 aaKnown RBP28.03■■■□□ 2.08
LMNB1-202ENST00000395354 TIMELESSQ9UNS1 1208 aa28■■■□□ 2.07
LMNB1-202ENST00000395354 VWDEQ8N2E2 1590 aa27.99■■■□□ 2.07
LMNB1-202ENST00000395354 SLC4A1APQ9BWU0 796 aaKnown RBP27.97■■■□□ 2.07
LMNB1-202ENST00000395354 KDM5DQ9BY66 1539 aa27.97■■■□□ 2.07
LMNB1-202ENST00000395354 MPHOSPH9Q99550 1183 aa27.96■■■□□ 2.07
LMNB1-202ENST00000395354 IQGAP3Q86VI3 1631 aa27.96■■■□□ 2.07
LMNB1-202ENST00000395354 FAM135AQ9P2D6 1515 aa27.96■■■□□ 2.07
LMNB1-202ENST00000395354 ABCC3O15438 1527 aa27.95■■■□□ 2.07
LMNB1-202ENST00000395354 PZPP20742 1482 aa27.94■■■□□ 2.06
LMNB1-202ENST00000395354 ADAMTSL3P82987 1691 aa27.93■■■□□ 2.06
LMNB1-202ENST00000395354 CEP152O94986 1710 aa27.92■■■□□ 2.06
LMNB1-202ENST00000395354 LMTK2Q8IWU2 1503 aa27.92■■■□□ 2.06
LMNB1-202ENST00000395354 CNTLNQ9NXG0 1405 aa27.91■■■□□ 2.06
LMNB1-202ENST00000395354 CLTCQ00610 1675 aaKnown RBP27.91■■■□□ 2.06
LMNB1-202ENST00000395354 ZC3H13Q5T200 1668 aaKnown RBP27.91■■■□□ 2.06
LMNB1-202ENST00000395354 FER1L4A9Z1Z3 1794 aa27.9■■■□□ 2.06
LMNB1-202ENST00000395354 PKD2Q13563 968 aa27.9■■■□□ 2.06
LMNB1-202ENST00000395354 MADDQ8WXG6 1647 aa27.88■■■□□ 2.05
LMNB1-202ENST00000395354 ZMYM3Q14202 1370 aa27.88■■■□□ 2.05
LMNB1-202ENST00000395354 ZNF316A6NFI3 1004 aaPredicted RBP27.87■■■□□ 2.05
LMNB1-202ENST00000395354 TET3O43151 1660 aa27.87■■■□□ 2.05
LMNB1-202ENST00000395354 SIN3AQ96ST3 1273 aa27.86■■■□□ 2.05
LMNB1-202ENST00000395354 CAMSAP1Q5T5Y3 1602 aa27.85■■■□□ 2.05
LMNB1-202ENST00000395354 KDM4FA0A1W2PPD8 638 aa27.84■■■□□ 2.05
LMNB1-202ENST00000395354 FOXD1Q16676 465 aa27.83■■■□□ 2.05
LMNB1-202ENST00000395354 EFCAB6Q5THR3 1501 aa27.83■■■□□ 2.05
LMNB1-202ENST00000395354 RIMS1Q86UR5 1692 aaKnown RBP27.83■■■□□ 2.05
LMNB1-202ENST00000395354 ARHGAP31Q2M1Z3 1444 aa27.82■■■□□ 2.04
LMNB1-202ENST00000395354 CEBPAP49715 358 aaPredicted RBP27.82■■■□□ 2.04
LMNB1-202ENST00000395354 MROH2AA6NES4 1674 aa27.81■■■□□ 2.04
LMNB1-202ENST00000395354 NEUROD1Q13562 356 aa27.81■■■□□ 2.04
LMNB1-202ENST00000395354 NPATQ14207 1427 aa27.81■■■□□ 2.04
LMNB1-202ENST00000395354 PLPPR3Q6T4P5 718 aa27.8■■■□□ 2.04
LMNB1-202ENST00000395354 E9PCH4 1651 aa27.8■■■□□ 2.04
LMNB1-202ENST00000395354 CFAP65Q6ZU64 1925 aaKnown RBP27.79■■■□□ 2.04
LMNB1-202ENST00000395354 FBXO31Q5XUX0 539 aaPredicted RBP27.78■■■□□ 2.04
LMNB1-202ENST00000395354 RPRD2Q5VT52 1461 aaKnown RBP27.77■■■□□ 2.04
LMNB1-202ENST00000395354 C3P01024 1663 aa27.75■■■□□ 2.03
LMNB1-202ENST00000395354 PTPRMP28827 1452 aa27.74■■■□□ 2.03
LMNB1-202ENST00000395354 TONSLQ96HA7 1378 aa27.72■■■□□ 2.03
LMNB1-202ENST00000395354 ANKRD30BQ9BXX2 1392 aa27.7■■■□□ 2.02
LMNB1-202ENST00000395354 PPP1R15AO75807 674 aaPredicted RBP27.69■■■□□ 2.02
LMNB1-202ENST00000395354 PTPRTO14522 1441 aa27.68■■■□□ 2.02
LMNB1-202ENST00000395354 ERVK-7P63135 1459 aa27.68■■■□□ 2.02
LMNB1-202ENST00000395354 NOS1P29475 1434 aa27.68■■■□□ 2.02
LMNB1-202ENST00000395354 PREX1Q8TCU6 1659 aa27.67■■■□□ 2.02
LMNB1-202ENST00000395354 PLA2R1Q13018 1463 aa27.67■■■□□ 2.02
LMNB1-202ENST00000395354 SPATA31D1Q6ZQQ2 1576 aa27.65■■■□□ 2.02
LMNB1-202ENST00000395354 SPHKAPQ2M3C7 1700 aa27.64■■■□□ 2.01
LMNB1-202ENST00000395354 TNRQ92752 1358 aa27.63■■■□□ 2.01
LMNB1-202ENST00000395354 DIEXFQ68CQ4 756 aaKnown RBP27.6■■■□□ 2.01
LMNB1-202ENST00000395354 SLC52A1Q9NWF4 448 aa27.6■■■□□ 2.01
LMNB1-202ENST00000395354 SYNMO15061 1565 aa27.6■■■□□ 2.01
LMNB1-202ENST00000395354 TRPM2O94759 1503 aa27.6■■■□□ 2.01
LMNB1-202ENST00000395354 IDI1Q13907 227 aa27.59■■■□□ 2.01
LMNB1-202ENST00000395354 SETD1BQ9UPS6 1966 aaKnown RBP27.58■■■□□ 2.01
LMNB1-202ENST00000395354 CCDC144AA2RUR9 1427 aa27.57■■■□□ 2
LMNB1-202ENST00000395354 UGGT1Q9NYU2 1555 aa27.56■■■□□ 2
LMNB1-202ENST00000395354 CLTCL1P53675 1640 aa27.52■■■□□ 2
LMNB1-202ENST00000395354 PIK3C2BO00750 1634 aa27.51■■□□□ 1.99
LMNB1-202ENST00000395354 NLRP1Q9C000 1473 aa27.5■■□□□ 1.99
LMNB1-202ENST00000395354 CHGAP10645 457 aaKnown RBP27.5■■□□□ 1.99
LMNB1-202ENST00000395354 STAG3Q9UJ98 1225 aa27.49■■□□□ 1.99
LMNB1-202ENST00000395354 MYO3AQ8NEV4 1616 aa27.45■■□□□ 1.99
LMNB1-202ENST00000395354 UHRF1BP1Q6BDS2 1440 aa27.44■■□□□ 1.98
LMNB1-202ENST00000395354 A2ML1A8K2U0 1454 aa27.43■■□□□ 1.98
LMNB1-202ENST00000395354 KIF1BO60333 1816 aa27.43■■□□□ 1.98
LMNB1-202ENST00000395354 L3MBTL2Q969R5 705 aa27.43■■□□□ 1.98
LMNB1-202ENST00000395354 RGL3Q3MIN7 710 aa27.42■■□□□ 1.98
LMNB1-202ENST00000395354 TMEM131LA2VDJ0 1609 aa27.39■■□□□ 1.98
LMNB1-202ENST00000395354 THEMISQ8N1K5 641 aaPredicted RBP27.39■■□□□ 1.98
LMNB1-202ENST00000395354 SPATA31E1Q6ZUB1 1445 aa27.39■■□□□ 1.98
LMNB1-202ENST00000395354 CEP170BQ9Y4F5 1589 aaPredicted RBP27.39■■□□□ 1.98
LMNB1-202ENST00000395354 ZNF326Q5BKZ1 582 aaKnown RBP27.39■■□□□ 1.97
LMNB1-202ENST00000395354 ADGRB3O60242 1522 aa27.38■■□□□ 1.97
LMNB1-202ENST00000395354 UBR1Q8IWV7 1749 aa27.36■■□□□ 1.97
LMNB1-202ENST00000395354 KDM5AP29375 1690 aaKnown RBP27.35■■□□□ 1.97
LMNB1-202ENST00000395354 ZNF142P52746 1687 aaPredicted RBP27.35■■□□□ 1.97
LMNB1-202ENST00000395354 MYO5BQ9ULV0 1848 aa27.34■■□□□ 1.97
LMNB1-202ENST00000395354 NEURL4Q96JN8 1562 aa27.33■■□□□ 1.97
LMNB1-202ENST00000395354 AEBP2Q6ZN18 517 aaPredicted RBP27.32■■□□□ 1.96
LMNB1-202ENST00000395354 RPGRIP1LQ68CZ1 1315 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms