RNA–Protein interactions for RNA: ENST00000394830.7

PBRM1-204, Transcript of polybromo 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PBRM1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-204ENST00000394830 GPATCH8Q9UKJ3 1502 aaKnown RBP18.14■□□□□ 0.5
PBRM1-204ENST00000394830 PPM1GO15355 546 aaPredicted RBP18.14■□□□□ 0.49
PBRM1-204ENST00000394830 SMG6Q86US8 1419 aaKnown RBP18.13■□□□□ 0.49
PBRM1-204ENST00000394830 RAPGEF6Q8TEU7 1601 aa18.13■□□□□ 0.49
PBRM1-204ENST00000394830 STAC3Q96MF2 364 aa18.12■□□□□ 0.49
PBRM1-204ENST00000394830 IPO9Q96P70 1041 aaKnown RBP18.12■□□□□ 0.49
PBRM1-204ENST00000394830 WASHC2CQ9Y4E1 1318 aa18.11■□□□□ 0.49
PBRM1-204ENST00000394830 ARHGAP5Q13017 1502 aa18.11■□□□□ 0.49
PBRM1-204ENST00000394830 GOLGA2Q08379 1002 aa18.11■□□□□ 0.49
PBRM1-204ENST00000394830 ARHGEF11O15085 1522 aa18.1■□□□□ 0.49
PBRM1-204ENST00000394830 EXOC6Q8TAG9 804 aa18.1■□□□□ 0.49
PBRM1-204ENST00000394830 KIAA0556O60303 1618 aa18.1■□□□□ 0.49
PBRM1-204ENST00000394830 NEUROD2Q15784 382 aa18.09■□□□□ 0.49
PBRM1-204ENST00000394830 PLEKHH2Q8IVE3 1493 aa18.09■□□□□ 0.49
PBRM1-204ENST00000394830 MAGI3Q5TCQ9 1506 aa18.08■□□□□ 0.49
PBRM1-204ENST00000394830 NBPF1Q3BBV0 1214 aa18.08■□□□□ 0.49
PBRM1-204ENST00000394830 MORC1Q86VD1 984 aa18.08■□□□□ 0.48
PBRM1-204ENST00000394830 CCDC141Q6ZP82 1450 aa18.08■□□□□ 0.48
PBRM1-204ENST00000394830 KIF14Q15058 1648 aa18.08■□□□□ 0.48
PBRM1-204ENST00000394830 RGS3P49796 1198 aa18.07■□□□□ 0.48
PBRM1-204ENST00000394830 TNNT2P45379 298 aaPredicted RBP18.06■□□□□ 0.48
PBRM1-204ENST00000394830 LAS1LQ9Y4W2 734 aaKnown RBP18.04■□□□□ 0.48
PBRM1-204ENST00000394830 GGT6Q6P531 493 aa18.04■□□□□ 0.48
PBRM1-204ENST00000394830 ESF1Q9H501 851 aaKnown RBP18.04■□□□□ 0.48
PBRM1-204ENST00000394830 DNMT1P26358 1616 aaKnown RBP18.03■□□□□ 0.48
PBRM1-204ENST00000394830 TARBP1Q13395 1621 aaKnown RBP18.03■□□□□ 0.48
PBRM1-204ENST00000394830 DISP1Q96F81 1524 aa18.03■□□□□ 0.48
PBRM1-204ENST00000394830 DEKP35659 375 aaKnown RBP18.03■□□□□ 0.48
PBRM1-204ENST00000394830 FRAT1Q92837 279 aaPredicted RBP18.03■□□□□ 0.48
PBRM1-204ENST00000394830 ITSN2Q9NZM3 1697 aa18.03■□□□□ 0.48
PBRM1-204ENST00000394830 PBRM1Q86U86 1689 aa18.02■□□□□ 0.48
PBRM1-204ENST00000394830 BECN1Q14457 450 aa18.02■□□□□ 0.47
PBRM1-204ENST00000394830 GCC2Q8IWJ2 1684 aa18.01■□□□□ 0.47
PBRM1-204ENST00000394830 PLIN1O60240 522 aa18■□□□□ 0.47
PBRM1-204ENST00000394830 MS4A1P11836 297 aa18■□□□□ 0.47
PBRM1-204ENST00000394830 PDE4AP27815 886 aa17.99■□□□□ 0.47
PBRM1-204ENST00000394830 CCDC146Q8IYE0 955 aa17.98■□□□□ 0.47
PBRM1-204ENST00000394830 CRBNQ96SW2 442 aa17.98■□□□□ 0.47
PBRM1-204ENST00000394830 ATP10BO94823 1461 aa17.98■□□□□ 0.47
PBRM1-204ENST00000394830 PZPP20742 1482 aa17.98■□□□□ 0.47
PBRM1-204ENST00000394830 TEX14Q8IWB6 1497 aa17.98■□□□□ 0.47
PBRM1-204ENST00000394830 MAPK8IP3Q9UPT6 1336 aa17.98■□□□□ 0.47
PBRM1-204ENST00000394830 BCL11AQ9H165 835 aa17.98■□□□□ 0.47
PBRM1-204ENST00000394830 FTSJ3Q8IY81 847 aaKnown RBP17.98■□□□□ 0.47
PBRM1-204ENST00000394830 RALGAPBQ86X10 1494 aa17.97■□□□□ 0.47
PBRM1-204ENST00000394830 SENP3Q9H4L4 574 aaPredicted RBP17.97■□□□□ 0.47
PBRM1-204ENST00000394830 POGKQ9P215 609 aa17.97■□□□□ 0.47
PBRM1-204ENST00000394830 AFAP1Q8N556 730 aa17.96■□□□□ 0.47
PBRM1-204ENST00000394830 ERBINQ96RT1 1412 aa17.96■□□□□ 0.47
PBRM1-204ENST00000394830 NGEFQ8N5V2 710 aa17.96■□□□□ 0.46
PBRM1-204ENST00000394830 CENPQQ7L2Z9 268 aaPredicted RBP17.95■□□□□ 0.46
PBRM1-204ENST00000394830 CDCA7LQ96GN5 454 aa17.95■□□□□ 0.46
PBRM1-204ENST00000394830 ADGRL2O95490 1459 aa17.94■□□□□ 0.46
PBRM1-204ENST00000394830 ADAMTS8Q9UP79 889 aa17.94■□□□□ 0.46
PBRM1-204ENST00000394830 U2SURPO15042 1029 aaKnown RBP17.93■□□□□ 0.46
PBRM1-204ENST00000394830 E9PSI1 815 aa17.93■□□□□ 0.46
PBRM1-204ENST00000394830 SHANK2Q9UPX8 1470 aa17.92■□□□□ 0.46
PBRM1-204ENST00000394830 SRPK2P78362 688 aaKnown RBP17.92■□□□□ 0.46
PBRM1-204ENST00000394830 TRAK1Q9UPV9 953 aa17.92■□□□□ 0.46
PBRM1-204ENST00000394830 APAF1O14727 1248 aa17.91■□□□□ 0.46
PBRM1-204ENST00000394830 PPP2R1AP30153 589 aa17.91■□□□□ 0.46
PBRM1-204ENST00000394830 CENPJQ9HC77 1338 aaPredicted RBP17.91■□□□□ 0.46
PBRM1-204ENST00000394830 PNNQ9H307 717 aaKnown RBP17.91■□□□□ 0.46
PBRM1-204ENST00000394830 EIF4G3O43432 1585 aaKnown RBP17.9■□□□□ 0.46
PBRM1-204ENST00000394830 U2AF1L5P0DN76 240 aaPredicted RBP17.89■□□□□ 0.45
PBRM1-204ENST00000394830 U2AF1Q01081 240 aaKnown RBP eCLIP17.89■□□□□ 0.45
PBRM1-204ENST00000394830 DHX29Q7Z478 1369 aaKnown RBP17.89■□□□□ 0.45
PBRM1-204ENST00000394830 MYH16Q9H6N6 1097 aa17.89■□□□□ 0.45
PBRM1-204ENST00000394830 ARHGEF12Q9NZN5 1544 aa17.88■□□□□ 0.45
PBRM1-204ENST00000394830 SAFB2Q14151 953 aaKnown RBP eCLIP17.88■□□□□ 0.45
PBRM1-204ENST00000394830 HSP90AA1P07900 732 aaKnown RBP17.88■□□□□ 0.45
PBRM1-204ENST00000394830 NUP160Q12769 1436 aa17.88■□□□□ 0.45
PBRM1-204ENST00000394830 SPATA31E1Q6ZUB1 1445 aa17.88■□□□□ 0.45
PBRM1-204ENST00000394830 KDM6BO15054 1643 aa17.87■□□□□ 0.45
PBRM1-204ENST00000394830 UHRF1BP1Q6BDS2 1440 aa17.87■□□□□ 0.45
PBRM1-204ENST00000394830 MSH5O43196 834 aa17.86■□□□□ 0.45
PBRM1-204ENST00000394830 STK26Q9P289 416 aa17.85■□□□□ 0.45
PBRM1-204ENST00000394830 CFAP70Q5T0N1 1121 aa17.85■□□□□ 0.45
PBRM1-204ENST00000394830 CGNL1Q0VF96 1302 aa17.84■□□□□ 0.45
PBRM1-204ENST00000394830 FAM161AQ3B820 660 aa17.84■□□□□ 0.45
PBRM1-204ENST00000394830 PMFBP1Q8TBY8 1022 aa17.84■□□□□ 0.45
PBRM1-204ENST00000394830 VGFO15240 615 aaPredicted RBP17.83■□□□□ 0.44
PBRM1-204ENST00000394830 USP35Q9P2H5 1018 aa17.83■□□□□ 0.44
PBRM1-204ENST00000394830 RWDD1Q9H446 243 aaPredicted RBP17.82■□□□□ 0.44
PBRM1-204ENST00000394830 HDGFL2Q7Z4V5 671 aaPredicted RBP17.82■□□□□ 0.44
PBRM1-204ENST00000394830 OSCARQ8IYS5 282 aa17.82■□□□□ 0.44
PBRM1-204ENST00000394830 PRAG1Q86YV5 1406 aa17.82■□□□□ 0.44
PBRM1-204ENST00000394830 CHMP4BQ9H444 224 aaKnown RBP17.81■□□□□ 0.44
PBRM1-204ENST00000394830 FAM135AQ9P2D6 1515 aa17.81■□□□□ 0.44
PBRM1-204ENST00000394830 EVC2Q86UK5 1308 aa17.81■□□□□ 0.44
PBRM1-204ENST00000394830 TERF2IPQ9NYB0 399 aa17.8■□□□□ 0.44
PBRM1-204ENST00000394830 SCAPERQ9BY12 1400 aa17.79■□□□□ 0.44
PBRM1-204ENST00000394830 RRP7AQ9Y3A4 280 aaKnown RBP17.79■□□□□ 0.44
PBRM1-204ENST00000394830 PARD3Q8TEW0 1356 aa17.77■□□□□ 0.44
PBRM1-204ENST00000394830 DISP3Q9P2K9 1392 aa17.77■□□□□ 0.44
PBRM1-204ENST00000394830 NUTM2DQ5VT03 806 aaPredicted RBP17.77■□□□□ 0.44
PBRM1-204ENST00000394830 IPO8O15397 1037 aaKnown RBP17.77■□□□□ 0.44
PBRM1-204ENST00000394830 RUNDC1Q96C34 613 aa17.76■□□□□ 0.43
PBRM1-204ENST00000394830 BACH2Q9BYV9 841 aa17.76■□□□□ 0.43
PBRM1-204ENST00000394830 SYCP2Q9BX26 1530 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms