RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 DNMT1P26358 1616 aaKnown RBP13.99□□□□□ -0.17
ACTN1-203ENST00000394419 DHX29Q7Z478 1369 aaKnown RBP13.98□□□□□ -0.17
ACTN1-203ENST00000394419 SYNJ2O15056 1496 aa13.97□□□□□ -0.17
ACTN1-203ENST00000394419 MAGI1Q96QZ7 1491 aaPredicted RBP13.97□□□□□ -0.17
ACTN1-203ENST00000394419 KIF14Q15058 1648 aa13.97□□□□□ -0.17
ACTN1-203ENST00000394419 RRP1P56182 461 aaKnown RBP13.96□□□□□ -0.17
ACTN1-203ENST00000394419 PAK3O75914 559 aaPredicted RBP13.95□□□□□ -0.18
ACTN1-203ENST00000394419 DAXXQ9UER7 740 aaPredicted RBP13.95□□□□□ -0.18
ACTN1-203ENST00000394419 ATP10BO94823 1461 aa13.95□□□□□ -0.18
ACTN1-203ENST00000394419 SMG6Q86US8 1419 aaKnown RBP13.95□□□□□ -0.18
ACTN1-203ENST00000394419 ARID4BQ4LE39 1312 aaPredicted RBP13.95□□□□□ -0.18
ACTN1-203ENST00000394419 EIF4G3O43432 1585 aaKnown RBP13.94□□□□□ -0.18
ACTN1-203ENST00000394419 TNNT2P45379 298 aaPredicted RBP13.94□□□□□ -0.18
ACTN1-203ENST00000394419 RSPH4AQ5TD94 716 aa13.94□□□□□ -0.18
ACTN1-203ENST00000394419 LAS1LQ9Y4W2 734 aaKnown RBP13.93□□□□□ -0.18
ACTN1-203ENST00000394419 SKAP1Q86WV1 359 aa13.92□□□□□ -0.18
ACTN1-203ENST00000394419 EFCAB2Q5VUJ9 269 aa13.92□□□□□ -0.18
ACTN1-203ENST00000394419 CCDC146Q8IYE0 955 aa13.92□□□□□ -0.18
ACTN1-203ENST00000394419 AFAP1Q8N556 730 aa13.92□□□□□ -0.18
ACTN1-203ENST00000394419 NEUROD2Q15784 382 aa13.91□□□□□ -0.18
ACTN1-203ENST00000394419 BRD4O60885 1362 aaPredicted RBP13.91□□□□□ -0.18
ACTN1-203ENST00000394419 DEKP35659 375 aaKnown RBP13.9□□□□□ -0.18
ACTN1-203ENST00000394419 CANXP27824 592 aaKnown RBP13.89□□□□□ -0.19
ACTN1-203ENST00000394419 ARHGAP5Q13017 1502 aa13.89□□□□□ -0.19
ACTN1-203ENST00000394419 ADAMTS8Q9UP79 889 aa13.89□□□□□ -0.19
ACTN1-203ENST00000394419 CEP170Q5SW79 1584 aa13.89□□□□□ -0.19
ACTN1-203ENST00000394419 KIF3BO15066 747 aa13.88□□□□□ -0.19
ACTN1-203ENST00000394419 IPO9Q96P70 1041 aaKnown RBP13.88□□□□□ -0.19
ACTN1-203ENST00000394419 CRBNQ96SW2 442 aa13.88□□□□□ -0.19
ACTN1-203ENST00000394419 SPAG9O60271 1321 aaKnown RBP13.88□□□□□ -0.19
ACTN1-203ENST00000394419 RGS3P49796 1198 aa13.87□□□□□ -0.19
ACTN1-203ENST00000394419 ITSN2Q9NZM3 1697 aa13.85□□□□□ -0.19
ACTN1-203ENST00000394419 RALGAPBQ86X10 1494 aa13.85□□□□□ -0.19
ACTN1-203ENST00000394419 CCDC141Q6ZP82 1450 aa13.84□□□□□ -0.19
ACTN1-203ENST00000394419 DISP3Q9P2K9 1392 aa13.84□□□□□ -0.19
ACTN1-203ENST00000394419 PDE4AP27815 886 aa13.84□□□□□ -0.19
ACTN1-203ENST00000394419 PDE3BQ13370 1112 aa13.84□□□□□ -0.19
ACTN1-203ENST00000394419 BCORL1Q5H9F3 1711 aa13.84□□□□□ -0.19
ACTN1-203ENST00000394419 PLEKHH2Q8IVE3 1493 aa13.84□□□□□ -0.19
ACTN1-203ENST00000394419 CDCA8Q53HL2 280 aa13.83□□□□□ -0.2
ACTN1-203ENST00000394419 ADGRL2O95490 1459 aa13.83□□□□□ -0.2
ACTN1-203ENST00000394419 TCERG1O14776 1098 aaKnown RBP13.82□□□□□ -0.2
ACTN1-203ENST00000394419 NUTM2DQ5VT03 806 aaPredicted RBP13.82□□□□□ -0.2
ACTN1-203ENST00000394419 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.81□□□□□ -0.2
ACTN1-203ENST00000394419 PER1O15534 1290 aaPredicted RBP13.81□□□□□ -0.2
ACTN1-203ENST00000394419 C20orf194Q5TEA3 1177 aa13.81□□□□□ -0.2
ACTN1-203ENST00000394419 GGT6Q6P531 493 aa13.8□□□□□ -0.2
ACTN1-203ENST00000394419 TESK2Q96S53 571 aa13.8□□□□□ -0.2
ACTN1-203ENST00000394419 NUP160Q12769 1436 aa13.8□□□□□ -0.2
ACTN1-203ENST00000394419 APAF1O14727 1248 aa13.8□□□□□ -0.2
ACTN1-203ENST00000394419 NEFMP07197 916 aa13.8□□□□□ -0.2
ACTN1-203ENST00000394419 SLC4A3P48751 1232 aa13.8□□□□□ -0.2
ACTN1-203ENST00000394419 SAFB2Q14151 953 aaKnown RBP eCLIP13.8□□□□□ -0.2
ACTN1-203ENST00000394419 GOLGA2Q08379 1002 aa13.79□□□□□ -0.2
ACTN1-203ENST00000394419 CFAP70Q5T0N1 1121 aa13.79□□□□□ -0.2
ACTN1-203ENST00000394419 FRAT1Q92837 279 aaPredicted RBP13.79□□□□□ -0.2
ACTN1-203ENST00000394419 ERBINQ96RT1 1412 aa13.79□□□□□ -0.2
ACTN1-203ENST00000394419 FAM135AQ9P2D6 1515 aa13.79□□□□□ -0.2
ACTN1-203ENST00000394419 PPP2R1AP30153 589 aa13.79□□□□□ -0.2
ACTN1-203ENST00000394419 UHRF1BP1Q6BDS2 1440 aa13.78□□□□□ -0.2
ACTN1-203ENST00000394419 PRAG1Q86YV5 1406 aa13.78□□□□□ -0.2
ACTN1-203ENST00000394419 MBD5Q9P267 1494 aa13.78□□□□□ -0.2
ACTN1-203ENST00000394419 SYCP2Q9BX26 1530 aa13.78□□□□□ -0.2
ACTN1-203ENST00000394419 TRAK1Q9UPV9 953 aa13.78□□□□□ -0.2
ACTN1-203ENST00000394419 KDM5CP41229 1560 aa13.78□□□□□ -0.2
ACTN1-203ENST00000394419 ABCC10Q5T3U5 1492 aa13.77□□□□□ -0.2
ACTN1-203ENST00000394419 RRP7AQ9Y3A4 280 aaKnown RBP13.77□□□□□ -0.21
ACTN1-203ENST00000394419 ADGBQ8N7X0 1667 aa13.76□□□□□ -0.21
ACTN1-203ENST00000394419 NPM1P06748 294 aaKnown RBP eCLIP13.75□□□□□ -0.21
ACTN1-203ENST00000394419 LRPPRCP42704 1394 aaKnown RBP13.75□□□□□ -0.21
ACTN1-203ENST00000394419 RNF123Q5XPI4 1314 aa13.75□□□□□ -0.21
ACTN1-203ENST00000394419 KANK1Q14678 1352 aa13.75□□□□□ -0.21
ACTN1-203ENST00000394419 PARD3Q8TEW0 1356 aa13.74□□□□□ -0.21
ACTN1-203ENST00000394419 SHANK2Q9UPX8 1470 aa13.73□□□□□ -0.21
ACTN1-203ENST00000394419 MORC1Q86VD1 984 aa13.73□□□□□ -0.21
ACTN1-203ENST00000394419 CDC42BPAQ5VT25 1732 aa13.72□□□□□ -0.21
ACTN1-203ENST00000394419 A2MP01023 1474 aa13.72□□□□□ -0.21
ACTN1-203ENST00000394419 ARHGEF12Q9NZN5 1544 aa13.72□□□□□ -0.21
ACTN1-203ENST00000394419 TMEM132EQ6IEE7 984 aa13.72□□□□□ -0.21
ACTN1-203ENST00000394419 BCL2L13Q9BXK5 485 aa13.71□□□□□ -0.21
ACTN1-203ENST00000394419 BACH2Q9BYV9 841 aa13.71□□□□□ -0.21
ACTN1-203ENST00000394419 RTN4Q9NQC3 1192 aaKnown RBP13.71□□□□□ -0.21
ACTN1-203ENST00000394419 WASHC2CQ9Y4E1 1318 aa13.71□□□□□ -0.21
ACTN1-203ENST00000394419 ABCA8O94911 1581 aa13.7□□□□□ -0.22
ACTN1-203ENST00000394419 BCAR3O75815 825 aa13.7□□□□□ -0.22
ACTN1-203ENST00000394419 STK26Q9P289 416 aa13.7□□□□□ -0.22
ACTN1-203ENST00000394419 ANO8Q9HCE9 1232 aaPredicted RBP13.7□□□□□ -0.22
ACTN1-203ENST00000394419 CLUAP1Q96AJ1 413 aa13.69□□□□□ -0.22
ACTN1-203ENST00000394419 SCAPERQ9BY12 1400 aa13.69□□□□□ -0.22
ACTN1-203ENST00000394419 TRAPPC8Q9Y2L5 1435 aa13.68□□□□□ -0.22
ACTN1-203ENST00000394419 PLA2R1Q13018 1463 aa13.68□□□□□ -0.22
ACTN1-203ENST00000394419 SAMD9LQ8IVG5 1584 aa13.67□□□□□ -0.22
ACTN1-203ENST00000394419 DDRGK1Q96HY6 314 aa13.67□□□□□ -0.22
ACTN1-203ENST00000394419 COG6Q9Y2V7 657 aa13.67□□□□□ -0.22
ACTN1-203ENST00000394419 AMER1Q5JTC6 1135 aaPredicted RBP13.67□□□□□ -0.22
ACTN1-203ENST00000394419 DUSP27Q5VZP5 1158 aa13.66□□□□□ -0.22
ACTN1-203ENST00000394419 SLC12A5Q9H2X9 1139 aa13.66□□□□□ -0.22
ACTN1-203ENST00000394419 ADGRF5Q8IZF2 1346 aa13.66□□□□□ -0.22
ACTN1-203ENST00000394419 U2SURPO15042 1029 aaKnown RBP13.66□□□□□ -0.22
ACTN1-203ENST00000394419 MS4A1P11836 297 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms