RNA–Protein interactions for RNA: ENST00000394023.7

SMARCC2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-203ENST00000394023 ANP32AP39687 249 aaKnown RBP24.93■■□□□ 1.58
SMARCC2-203ENST00000394023 NEUROD2Q15784 382 aa24.92■■□□□ 1.58
SMARCC2-203ENST00000394023 CCDC141Q6ZP82 1450 aa24.92■■□□□ 1.58
SMARCC2-203ENST00000394023 LRRIQ1Q96JM4 1722 aa24.9■■□□□ 1.58
SMARCC2-203ENST00000394023 PZPP20742 1482 aa24.9■■□□□ 1.58
SMARCC2-203ENST00000394023 DNMT1P26358 1616 aaKnown RBP24.89■■□□□ 1.58
SMARCC2-203ENST00000394023 ANP32EQ9BTT0 268 aa24.89■■□□□ 1.58
SMARCC2-203ENST00000394023 PLPPR3Q6T4P5 718 aa24.88■■□□□ 1.57
SMARCC2-203ENST00000394023 RCAN3Q9UKA8 241 aa24.87■■□□□ 1.57
SMARCC2-203ENST00000394023 ARID4BQ4LE39 1312 aaPredicted RBP24.87■■□□□ 1.57
SMARCC2-203ENST00000394023 PNISRQ8TF01 805 aaKnown RBP24.85■■□□□ 1.57
SMARCC2-203ENST00000394023 ERICH6BQ5W0A0 696 aa24.85■■□□□ 1.57
SMARCC2-203ENST00000394023 PLEKHH2Q8IVE3 1493 aa24.83■■□□□ 1.57
SMARCC2-203ENST00000394023 TRAK1Q9UPV9 953 aa24.83■■□□□ 1.57
SMARCC2-203ENST00000394023 STK26Q9P289 416 aa24.81■■□□□ 1.56
SMARCC2-203ENST00000394023 CCDC146Q8IYE0 955 aa24.81■■□□□ 1.56
SMARCC2-203ENST00000394023 WASHC2CQ9Y4E1 1318 aa24.8■■□□□ 1.56
SMARCC2-203ENST00000394023 DENND4BO75064 1496 aaPredicted RBP24.8■■□□□ 1.56
SMARCC2-203ENST00000394023 GCC2Q8IWJ2 1684 aa24.79■■□□□ 1.56
SMARCC2-203ENST00000394023 ITSN2Q9NZM3 1697 aa24.79■■□□□ 1.56
SMARCC2-203ENST00000394023 OSCARQ8IYS5 282 aa24.79■■□□□ 1.56
SMARCC2-203ENST00000394023 TEX14Q8IWB6 1497 aa24.79■■□□□ 1.56
SMARCC2-203ENST00000394023 SCAPERQ9BY12 1400 aa24.79■■□□□ 1.56
SMARCC2-203ENST00000394023 PLIN1O60240 522 aa24.79■■□□□ 1.56
SMARCC2-203ENST00000394023 NBR1Q14596 966 aa24.78■■□□□ 1.56
SMARCC2-203ENST00000394023 ESF1Q9H501 851 aaKnown RBP24.78■■□□□ 1.56
SMARCC2-203ENST00000394023 RTL5Q5HYW3 569 aaPredicted RBP24.78■■□□□ 1.56
SMARCC2-203ENST00000394023 CFAP70Q5T0N1 1121 aa24.78■■□□□ 1.56
SMARCC2-203ENST00000394023 MLECQ14165 292 aa24.76■■□□□ 1.55
SMARCC2-203ENST00000394023 CDCA7LQ96GN5 454 aa24.75■■□□□ 1.55
SMARCC2-203ENST00000394023 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.75■■□□□ 1.55
SMARCC2-203ENST00000394023 SYCP2Q9BX26 1530 aa24.73■■□□□ 1.55
SMARCC2-203ENST00000394023 BCL11AQ9H165 835 aa24.73■■□□□ 1.55
SMARCC2-203ENST00000394023 EXOC6Q8TAG9 804 aa24.72■■□□□ 1.55
SMARCC2-203ENST00000394023 MORC1Q86VD1 984 aa24.71■■□□□ 1.55
SMARCC2-203ENST00000394023 ZBTB47Q9UFB7 747 aaPredicted RBP24.69■■□□□ 1.54
SMARCC2-203ENST00000394023 CYB5RLQ6IPT4 315 aa24.69■■□□□ 1.54
SMARCC2-203ENST00000394023 BRD4O60885 1362 aaPredicted RBP24.69■■□□□ 1.54
SMARCC2-203ENST00000394023 TMEM132EQ6IEE7 984 aa24.68■■□□□ 1.54
SMARCC2-203ENST00000394023 POGKQ9P215 609 aa24.68■■□□□ 1.54
SMARCC2-203ENST00000394023 PPM1GO15355 546 aaPredicted RBP24.67■■□□□ 1.54
SMARCC2-203ENST00000394023 ADGRL2O95490 1459 aa24.67■■□□□ 1.54
SMARCC2-203ENST00000394023 ADAMTS8Q9UP79 889 aa24.66■■□□□ 1.54
SMARCC2-203ENST00000394023 SRPK2P78362 688 aaKnown RBP24.66■■□□□ 1.54
SMARCC2-203ENST00000394023 EIF3AQ14152 1382 aaKnown RBP24.66■■□□□ 1.54
SMARCC2-203ENST00000394023 RRP1P56182 461 aaKnown RBP24.66■■□□□ 1.54
SMARCC2-203ENST00000394023 ABCC10Q5T3U5 1492 aa24.64■■□□□ 1.53
SMARCC2-203ENST00000394023 FRAT1Q92837 279 aaPredicted RBP24.64■■□□□ 1.53
SMARCC2-203ENST00000394023 PDE3BQ13370 1112 aa24.63■■□□□ 1.53
SMARCC2-203ENST00000394023 FAM135AQ9P2D6 1515 aa24.63■■□□□ 1.53
SMARCC2-203ENST00000394023 NEFMP07197 916 aa24.62■■□□□ 1.53
SMARCC2-203ENST00000394023 SPATA31E1Q6ZUB1 1445 aa24.62■■□□□ 1.53
SMARCC2-203ENST00000394023 TRAPPC8Q9Y2L5 1435 aa24.62■■□□□ 1.53
SMARCC2-203ENST00000394023 ERBINQ96RT1 1412 aa24.61■■□□□ 1.53
SMARCC2-203ENST00000394023 CFAP53Q96M91 514 aa24.61■■□□□ 1.53
SMARCC2-203ENST00000394023 SLC24A1O60721 1099 aa24.61■■□□□ 1.53
SMARCC2-203ENST00000394023 RAPGEF3O95398 923 aa24.61■■□□□ 1.53
SMARCC2-203ENST00000394023 DHX29Q7Z478 1369 aaKnown RBP24.6■■□□□ 1.53
SMARCC2-203ENST00000394023 U2SURPO15042 1029 aaKnown RBP24.6■■□□□ 1.53
SMARCC2-203ENST00000394023 RGS3P49796 1198 aa24.6■■□□□ 1.53
SMARCC2-203ENST00000394023 DISP3Q9P2K9 1392 aa24.59■■□□□ 1.53
SMARCC2-203ENST00000394023 GOLGA2Q08379 1002 aa24.59■■□□□ 1.53
SMARCC2-203ENST00000394023 ABCA8O94911 1581 aa24.59■■□□□ 1.53
SMARCC2-203ENST00000394023 RALGAPBQ86X10 1494 aa24.59■■□□□ 1.53
SMARCC2-203ENST00000394023 APAF1O14727 1248 aa24.59■■□□□ 1.53
SMARCC2-203ENST00000394023 KDM5BQ9UGL1 1544 aa24.59■■□□□ 1.53
SMARCC2-203ENST00000394023 SHANK2Q9UPX8 1470 aa24.58■■□□□ 1.53
SMARCC2-203ENST00000394023 PLCH2O75038 1416 aa24.58■■□□□ 1.52
SMARCC2-203ENST00000394023 RRP7AQ9Y3A4 280 aaKnown RBP24.58■■□□□ 1.52
SMARCC2-203ENST00000394023 MBD5Q9P267 1494 aa24.57■■□□□ 1.52
SMARCC2-203ENST00000394023 PPP2R1AP30153 589 aa24.56■■□□□ 1.52
SMARCC2-203ENST00000394023 PRAG1Q86YV5 1406 aa24.54■■□□□ 1.52
SMARCC2-203ENST00000394023 SMG6Q86US8 1419 aaKnown RBP24.54■■□□□ 1.52
SMARCC2-203ENST00000394023 CRBNQ96SW2 442 aa24.53■■□□□ 1.52
SMARCC2-203ENST00000394023 U2AF1L5P0DN76 240 aaPredicted RBP24.51■■□□□ 1.51
SMARCC2-203ENST00000394023 U2AF1Q01081 240 aaKnown RBP eCLIP24.51■■□□□ 1.51
SMARCC2-203ENST00000394023 TESK2Q96S53 571 aa24.51■■□□□ 1.51
SMARCC2-203ENST00000394023 NOP58Q9Y2X3 529 aaKnown RBP24.51■■□□□ 1.51
SMARCC2-203ENST00000394023 CENPJQ9HC77 1338 aaPredicted RBP24.51■■□□□ 1.51
SMARCC2-203ENST00000394023 ADGRF5Q8IZF2 1346 aa24.5■■□□□ 1.51
SMARCC2-203ENST00000394023 SLC12A5Q9H2X9 1139 aa24.48■■□□□ 1.51
SMARCC2-203ENST00000394023 FANCAO15360 1455 aa24.48■■□□□ 1.51
SMARCC2-203ENST00000394023 ADGRL1O94910 1474 aa24.47■■□□□ 1.51
SMARCC2-203ENST00000394023 STAC3Q96MF2 364 aa24.47■■□□□ 1.51
SMARCC2-203ENST00000394023 ABCC2Q92887 1545 aa24.46■■□□□ 1.51
SMARCC2-203ENST00000394023 ADGBQ8N7X0 1667 aa24.46■■□□□ 1.51
SMARCC2-203ENST00000394023 UHRF1BP1Q6BDS2 1440 aa24.46■■□□□ 1.51
SMARCC2-203ENST00000394023 ERCC6L2Q5T890 1561 aa24.45■■□□□ 1.5
SMARCC2-203ENST00000394023 VGFO15240 615 aaPredicted RBP24.45■■□□□ 1.5
SMARCC2-203ENST00000394023 LAS1LQ9Y4W2 734 aaKnown RBP24.44■■□□□ 1.5
SMARCC2-203ENST00000394023 MINK1Q8N4C8 1332 aaPredicted RBP24.43■■□□□ 1.5
SMARCC2-203ENST00000394023 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.43■■□□□ 1.56e-6■■□□□ 13.3
SMARCC2-203ENST00000394023 SAMD9LQ8IVG5 1584 aa24.42■■□□□ 1.5
SMARCC2-203ENST00000394023 PER1O15534 1290 aaPredicted RBP24.42■■□□□ 1.5
SMARCC2-203ENST00000394023 DUOX2Q9NRD8 1548 aa24.42■■□□□ 1.5
SMARCC2-203ENST00000394023 A2MP01023 1474 aa24.42■■□□□ 1.5
SMARCC2-203ENST00000394023 CABP2Q9NPB3 220 aa24.41■■□□□ 1.5
SMARCC2-203ENST00000394023 MAPK8IP3Q9UPT6 1336 aa24.41■■□□□ 1.5
SMARCC2-203ENST00000394023 CDC42BPAQ5VT25 1732 aa24.41■■□□□ 1.5
SMARCC2-203ENST00000394023 BCL2L13Q9BXK5 485 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms