RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 DDX12PQ92771 950 aa3.58□□□□□ -1.84
SNORD28B-201ENST00000390993 ADAM33Q9BZ11 813 aa3.58□□□□□ -1.84
SNORD28B-201ENST00000390993 VPS9D1Q9Y2B5 631 aa3.58□□□□□ -1.84
SNORD28B-201ENST00000390993 PDIA6Q15084 440 aa3.57□□□□□ -1.84
SNORD28B-201ENST00000390993 CERKQ8TCT0 537 aa3.57□□□□□ -1.84
SNORD28B-201ENST00000390993 KCTD12Q96CX2 325 aaKnown RBP3.57□□□□□ -1.84
SNORD28B-201ENST00000390993 RBM33Q96EV2 1170 aaKnown RBP3.57□□□□□ -1.84
SNORD28B-201ENST00000390993 ZBED2Q9BTP6 218 aa3.57□□□□□ -1.84
SNORD28B-201ENST00000390993 ARIH1Q9Y4X5 557 aaPredicted RBP3.57□□□□□ -1.84
SNORD28B-201ENST00000390993 PCDHGA10Q9Y5H3 936 aa3.57□□□□□ -1.84
SNORD28B-201ENST00000390993 ONECUT3O60422 494 aaPredicted RBP3.56□□□□□ -1.84
SNORD28B-201ENST00000390993 SLC4A3P48751 1232 aa3.56□□□□□ -1.84
SNORD28B-201ENST00000390993 HDGFP51858 240 aaKnown RBP3.56□□□□□ -1.84
SNORD28B-201ENST00000390993 PLCB2Q00722 1185 aa3.56□□□□□ -1.84
SNORD28B-201ENST00000390993 POTEEQ6S8J3 1075 aa3.56□□□□□ -1.84
SNORD28B-201ENST00000390993 PACS2Q86VP3 889 aa3.56□□□□□ -1.84
SNORD28B-201ENST00000390993 ANKK1Q8NFD2 765 aa3.56□□□□□ -1.84
SNORD28B-201ENST00000390993 TSHZ2Q9NRE2 1034 aa3.56□□□□□ -1.84
SNORD28B-201ENST00000390993 GRXCR2A6NFK2 248 aa3.55□□□□□ -1.84
SNORD28B-201ENST00000390993 HRO43593 1189 aa3.55□□□□□ -1.84
SNORD28B-201ENST00000390993 EN1Q05925 392 aaPredicted RBP3.55□□□□□ -1.84
SNORD28B-201ENST00000390993 C6orf132Q5T0Z8 1188 aa3.55□□□□□ -1.84
SNORD28B-201ENST00000390993 LAPTM4BQ86VI4 370 aa3.55□□□□□ -1.84
SNORD28B-201ENST00000390993 ARHGEF1Q92888 912 aaKnown RBP3.55□□□□□ -1.84
SNORD28B-201ENST00000390993 WNT2BQ93097 391 aa3.55□□□□□ -1.84
SNORD28B-201ENST00000390993 RABGEF1Q9UJ41 708 aa3.55□□□□□ -1.84
SNORD28B-201ENST00000390993 HAP1P54257 671 aaPredicted RBP3.54□□□□□ -1.84
SNORD28B-201ENST00000390993 SMYD5Q6GMV2 418 aa3.54□□□□□ -1.84
SNORD28B-201ENST00000390993 TRIM6-TRIM34B2RNG4 842 aa3.53□□□□□ -1.84
SNORD28B-201ENST00000390993 NBPF26B4DH59 902 aa3.53□□□□□ -1.84
SNORD28B-201ENST00000390993 TULP1O00294 542 aaPredicted RBP3.53□□□□□ -1.84
SNORD28B-201ENST00000390993 PTPN5P54829 565 aa3.53□□□□□ -1.84
SNORD28B-201ENST00000390993 NECTIN2Q92692 538 aa3.53□□□□□ -1.84
SNORD28B-201ENST00000390993 KIAA1468Q9P260 1216 aa3.53□□□□□ -1.84
SNORD28B-201ENST00000390993 COL9A1P20849 921 aa3.52□□□□□ -1.85
SNORD28B-201ENST00000390993 FAM98CQ17RN3 349 aaKnown RBP3.52□□□□□ -1.85
SNORD28B-201ENST00000390993 PROX2Q3B8N5 592 aa3.52□□□□□ -1.85
SNORD28B-201ENST00000390993 THSD4Q6ZMP0 1018 aa3.52□□□□□ -1.85
SNORD28B-201ENST00000390993 NYAP1Q6ZVC0 841 aa3.52□□□□□ -1.85
SNORD28B-201ENST00000390993 PLA2G2EQ9NZK7 142 aa3.52□□□□□ -1.85
SNORD28B-201ENST00000390993 BHMG1C9JSJ3 638 aaPredicted RBP3.51□□□□□ -1.85
SNORD28B-201ENST00000390993 PRSS12P56730 875 aa3.51□□□□□ -1.85
SNORD28B-201ENST00000390993 LRCH3Q96II8 777 aa3.51□□□□□ -1.85
SNORD28B-201ENST00000390993 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.51□□□□□ -1.85
SNORD28B-201ENST00000390993 TSR1Q2NL82 804 aaKnown RBP3.5□□□□□ -1.85
SNORD28B-201ENST00000390993 CDCA7LQ96GN5 454 aa3.5□□□□□ -1.85
SNORD28B-201ENST00000390993 ZFRQ96KR1 1074 aaKnown RBP3.5□□□□□ -1.85
SNORD28B-201ENST00000390993 RBM27Q9P2N5 1060 aaKnown RBP3.5□□□□□ -1.85
SNORD28B-201ENST00000390993 NUTM2FA1L443 756 aa3.49□□□□□ -1.85
SNORD28B-201ENST00000390993 SOWAHBA6NEL2 793 aa3.49□□□□□ -1.85
SNORD28B-201ENST00000390993 OSBPP22059 807 aa3.49□□□□□ -1.85
SNORD28B-201ENST00000390993 PPP4CP60510 307 aa3.49□□□□□ -1.85
SNORD28B-201ENST00000390993 KCNV2Q8TDN2 545 aa3.49□□□□□ -1.85
SNORD28B-201ENST00000390993 SEPT9Q9UHD8 586 aaPredicted RBP3.49□□□□□ -1.85
SNORD28B-201ENST00000390993 TSR3Q9UJK0 312 aaKnown RBP3.49□□□□□ -1.85
SNORD28B-201ENST00000390993 PNMA3Q9UL41 463 aa3.49□□□□□ -1.85
SNORD28B-201ENST00000390993 RNF40O75150 1001 aa3.48□□□□□ -1.85
SNORD28B-201ENST00000390993 TATDN2Q93075 761 aa3.48□□□□□ -1.85
SNORD28B-201ENST00000390993 FCHSD2O94868 740 aa3.47□□□□□ -1.85
SNORD28B-201ENST00000390993 BCAMP50895 628 aa3.47□□□□□ -1.85
SNORD28B-201ENST00000390993 RSPH4AQ5TD94 716 aa3.47□□□□□ -1.85
SNORD28B-201ENST00000390993 SLF2Q8IX21 1173 aa3.47□□□□□ -1.85
SNORD28B-201ENST00000390993 VSIG10Q8N0Z9 540 aa3.47□□□□□ -1.85
SNORD28B-201ENST00000390993 RBM46Q8TBY0 533 aaKnown RBP3.47□□□□□ -1.85
SNORD28B-201ENST00000390993 PRR14Q9BWN1 585 aa3.47□□□□□ -1.85
SNORD28B-201ENST00000390993 TSKSQ9UJT2 592 aa3.47□□□□□ -1.85
SNORD28B-201ENST00000390993 HPS5Q9UPZ3 1129 aa3.47□□□□□ -1.85
SNORD28B-201ENST00000390993 RGS20O76081 388 aa3.46□□□□□ -1.86
SNORD28B-201ENST00000390993 KCNC4Q03721 635 aa3.46□□□□□ -1.86
SNORD28B-201ENST00000390993 NUDT18Q6ZVK8 323 aa3.46□□□□□ -1.86
SNORD28B-201ENST00000390993 MLLT3P42568 568 aaPredicted RBP3.45□□□□□ -1.86
SNORD28B-201ENST00000390993 IFFO2Q5TF58 517 aa3.45□□□□□ -1.86
SNORD28B-201ENST00000390993 PADI6Q6TGC4 694 aa3.45□□□□□ -1.86
SNORD28B-201ENST00000390993 SAMD7Q7Z3H4 446 aa3.45□□□□□ -1.86
SNORD28B-201ENST00000390993 CDHR5Q9HBB8 845 aa3.45□□□□□ -1.86
SNORD28B-201ENST00000390993 SMAPO00193 183 aa3.44□□□□□ -1.86
SNORD28B-201ENST00000390993 SEMA3EO15041 775 aa3.44□□□□□ -1.86
SNORD28B-201ENST00000390993 OATP04181 439 aa3.44□□□□□ -1.86
SNORD28B-201ENST00000390993 DNAJB2P25686 324 aa3.44□□□□□ -1.86
SNORD28B-201ENST00000390993 HIC1Q14526 733 aa3.44□□□□□ -1.86
SNORD28B-201ENST00000390993 WBP1LQ9NX94 342 aa3.44□□□□□ -1.86
SNORD28B-201ENST00000390993 TESPA1A2RU30 521 aaPredicted RBP3.43□□□□□ -1.86
SNORD28B-201ENST00000390993 GGCXP38435 758 aa3.43□□□□□ -1.86
SNORD28B-201ENST00000390993 PTGDRQ13258 359 aa3.43□□□□□ -1.86
SNORD28B-201ENST00000390993 KMT5BQ4FZB7 885 aa3.43□□□□□ -1.86
SNORD28B-201ENST00000390993 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.42□□□□□ -1.86
SNORD28B-201ENST00000390993 A0A0G2JS52 829 aa3.42□□□□□ -1.86
SNORD28B-201ENST00000390993 ITGBL1O95965 494 aaPredicted RBP3.42□□□□□ -1.86
SNORD28B-201ENST00000390993 PRIM1P49642 420 aaKnown RBP3.42□□□□□ -1.86
SNORD28B-201ENST00000390993 SWT1Q5T5J6 900 aaKnown RBP3.42□□□□□ -1.86
SNORD28B-201ENST00000390993 GPIHBP1Q8IV16 184 aa3.42□□□□□ -1.86
SNORD28B-201ENST00000390993 IL21Q9HBE4 155 aa3.42□□□□□ -1.86
SNORD28B-201ENST00000390993 NPDC1Q9NQX5 325 aaPredicted RBP3.42□□□□□ -1.86
SNORD28B-201ENST00000390993 GNPATO15228 680 aa3.41□□□□□ -1.86
SNORD28B-201ENST00000390993 TTC13Q8NBP0 860 aa3.41□□□□□ -1.86
SNORD28B-201ENST00000390993 FAM198AQ9UFP1 575 aa3.41□□□□□ -1.86
SNORD28B-201ENST00000390993 EYA1Q99502 592 aa3.4□□□□□ -1.87
SNORD28B-201ENST00000390993 PCDHB3Q9Y5E6 796 aa3.4□□□□□ -1.87
SNORD28B-201ENST00000390993 ADGRG1Q9Y653 693 aa3.4□□□□□ -1.87
SNORD28B-201ENST00000390993 RCCD1A6NED2 376 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms