RNA–Protein interactions for RNA: ENST00000390945.1

RNU6-278P-201, Transcript of RNA, U6 small nuclear 278, pseudogene, humanhuman

BASIC

Gene RNU6-278P, Length 109 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-278P-201ENST00000390945 OTUD5Q96G74 571 aa7.35□□□□□ -1.23
RNU6-278P-201ENST00000390945 CDHR5Q9HBB8 845 aa7.35□□□□□ -1.23
RNU6-278P-201ENST00000390945 TSR1Q2NL82 804 aaKnown RBP7.34□□□□□ -1.23
RNU6-278P-201ENST00000390945 ZDHHC16Q969W1 377 aa7.34□□□□□ -1.23
RNU6-278P-201ENST00000390945 TMUB1Q9BVT8 246 aa7.34□□□□□ -1.23
RNU6-278P-201ENST00000390945 GPBP1L1Q9HC44 474 aaPredicted RBP7.34□□□□□ -1.23
RNU6-278P-201ENST00000390945 MAP3K7O43318 606 aa7.33□□□□□ -1.24
RNU6-278P-201ENST00000390945 KDM4CQ9H3R0 1056 aa7.33□□□□□ -1.24
RNU6-278P-201ENST00000390945 RIMBP2O15034 1052 aa7.32□□□□□ -1.24
RNU6-278P-201ENST00000390945 HOXB1P14653 301 aaPredicted RBP7.32□□□□□ -1.24
RNU6-278P-201ENST00000390945 CERKQ8TCT0 537 aa7.32□□□□□ -1.24
RNU6-278P-201ENST00000390945 RBM33Q96EV2 1170 aaKnown RBP7.32□□□□□ -1.24
RNU6-278P-201ENST00000390945 ADAM33Q9BZ11 813 aa7.32□□□□□ -1.24
RNU6-278P-201ENST00000390945 SNPHO15079 494 aa7.31□□□□□ -1.24
RNU6-278P-201ENST00000390945 LHX8Q68G74 356 aa7.31□□□□□ -1.24
RNU6-278P-201ENST00000390945 LHX6Q9UPM6 363 aa7.31□□□□□ -1.24
RNU6-278P-201ENST00000390945 ZNF454Q8N9F8 522 aa7.3□□□□□ -1.24
RNU6-278P-201ENST00000390945 PARP9Q8IXQ6 854 aa7.29□□□□□ -1.24
RNU6-278P-201ENST00000390945 PHOX2BQ99453 314 aa7.29□□□□□ -1.24
RNU6-278P-201ENST00000390945 REPIN1Q9BWE0 567 aaKnown RBP7.29□□□□□ -1.24
RNU6-278P-201ENST00000390945 RBM27Q9P2N5 1060 aaKnown RBP7.29□□□□□ -1.24
RNU6-278P-201ENST00000390945 DAXXQ9UER7 740 aaPredicted RBP7.29□□□□□ -1.24
RNU6-278P-201ENST00000390945 PSDA5PKW4 1024 aaPredicted RBP7.28□□□□□ -1.24
RNU6-278P-201ENST00000390945 ZNF710Q8N1W2 664 aa7.28□□□□□ -1.24
RNU6-278P-201ENST00000390945 FAM117AQ9C073 453 aa7.28□□□□□ -1.24
RNU6-278P-201ENST00000390945 BCL2L12Q9HB09 334 aa7.28□□□□□ -1.24
RNU6-278P-201ENST00000390945 PLEKHG3A1L390 1219 aa7.27□□□□□ -1.25
RNU6-278P-201ENST00000390945 IL27Q8NEV9 243 aa7.27□□□□□ -1.25
RNU6-278P-201ENST00000390945 PRSS12P56730 875 aa7.26□□□□□ -1.25
RNU6-278P-201ENST00000390945 ADGRG1Q9Y653 693 aa7.26□□□□□ -1.25
RNU6-278P-201ENST00000390945 OATP04181 439 aa7.25□□□□□ -1.25
RNU6-278P-201ENST00000390945 PXYLP1Q8TE99 480 aa7.25□□□□□ -1.25
RNU6-278P-201ENST00000390945 FAM198AQ9UFP1 575 aa7.25□□□□□ -1.25
RNU6-278P-201ENST00000390945 COL9A1P20849 921 aa7.24□□□□□ -1.25
RNU6-278P-201ENST00000390945 PADI6Q6TGC4 694 aa7.24□□□□□ -1.25
RNU6-278P-201ENST00000390945 METTL3Q86U44 580 aaKnown RBP7.24□□□□□ -1.25
RNU6-278P-201ENST00000390945 CDCA7LQ96GN5 454 aa7.24□□□□□ -1.25
RNU6-278P-201ENST00000390945 PPP4R3BQ5MIZ7 849 aa7.23□□□□□ -1.25
RNU6-278P-201ENST00000390945 ONECUT3O60422 494 aaPredicted RBP7.22□□□□□ -1.25
RNU6-278P-201ENST00000390945 MS4A1P11836 297 aa7.22□□□□□ -1.25
RNU6-278P-201ENST00000390945 FAM161AQ3B820 660 aa7.22□□□□□ -1.25
RNU6-278P-201ENST00000390945 DDRGK1Q96HY6 314 aa7.22□□□□□ -1.25
RNU6-278P-201ENST00000390945 EYA1Q99502 592 aa7.22□□□□□ -1.25
RNU6-278P-201ENST00000390945 GOPCQ9HD26 462 aa7.22□□□□□ -1.25
RNU6-278P-201ENST00000390945 CLCN1P35523 988 aa7.21□□□□□ -1.26
RNU6-278P-201ENST00000390945 GIGYF2Q6Y7W6 1299 aaKnown RBP7.21□□□□□ -1.26
RNU6-278P-201ENST00000390945 TIMELESSQ9UNS1 1208 aa7.21□□□□□ -1.26
RNU6-278P-201ENST00000390945 PPP1R3GB7ZBB8 358 aa7.2□□□□□ -1.26
RNU6-278P-201ENST00000390945 C3orf80F5H4A9 247 aa7.2□□□□□ -1.26
RNU6-278P-201ENST00000390945 PTPREP23469 700 aa7.2□□□□□ -1.26
RNU6-278P-201ENST00000390945 GPCPD1Q9NPB8 672 aa7.2□□□□□ -1.26
RNU6-278P-201ENST00000390945 TSKSQ9UJT2 592 aa7.2□□□□□ -1.26
RNU6-278P-201ENST00000390945 SSTR3P32745 418 aaPredicted RBP7.19□□□□□ -1.26
RNU6-278P-201ENST00000390945 POTEEQ6S8J3 1075 aa7.19□□□□□ -1.26
RNU6-278P-201ENST00000390945 ERICH6Q7L0X2 663 aa7.19□□□□□ -1.26
RNU6-278P-201ENST00000390945 FAM217BQ9NTX9 383 aaPredicted RBP7.19□□□□□ -1.26
RNU6-278P-201ENST00000390945 MDM2Q00987 491 aaPredicted RBP7.18□□□□□ -1.26
RNU6-278P-201ENST00000390945 TRIM6-TRIM34B2RNG4 842 aa7.17□□□□□ -1.26
RNU6-278P-201ENST00000390945 ST18O60284 1047 aa7.17□□□□□ -1.26
RNU6-278P-201ENST00000390945 TTLL12Q14166 644 aaPredicted RBP7.17□□□□□ -1.26
RNU6-278P-201ENST00000390945 SLC4A5Q9BY07 1137 aa7.17□□□□□ -1.26
RNU6-278P-201ENST00000390945 RBM46Q8TBY0 533 aaKnown RBP7.16□□□□□ -1.26
RNU6-278P-201ENST00000390945 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.15□□□□□ -1.26
RNU6-278P-201ENST00000390945 TATDN2Q93075 761 aa7.15□□□□□ -1.26
RNU6-278P-201ENST00000390945 ZBED2Q9BTP6 218 aa7.15□□□□□ -1.26
RNU6-278P-201ENST00000390945 RCCD1A6NED2 376 aa7.14□□□□□ -1.27
RNU6-278P-201ENST00000390945 NLRP7Q8WX94 980 aa7.14□□□□□ -1.27
RNU6-278P-201ENST00000390945 ARHGAP33O14559 1287 aa7.13□□□□□ -1.27
RNU6-278P-201ENST00000390945 NUDT18Q6ZVK8 323 aa7.13□□□□□ -1.27
RNU6-278P-201ENST00000390945 PACS2Q86VP3 889 aa7.13□□□□□ -1.27
RNU6-278P-201ENST00000390945 POTEB3A0JP26 581 aa7.12□□□□□ -1.27
RNU6-278P-201ENST00000390945 PROX2Q3B8N5 592 aa7.12□□□□□ -1.27
RNU6-278P-201ENST00000390945 SH3D19Q5HYK7 790 aa7.12□□□□□ -1.27
RNU6-278P-201ENST00000390945 POTEBQ6S5H4 581 aa7.12□□□□□ -1.27
RNU6-278P-201ENST00000390945 ZNF687Q8N1G0 1237 aa7.12□□□□□ -1.27
RNU6-278P-201ENST00000390945 BEGAINQ9BUH8 593 aa7.12□□□□□ -1.27
RNU6-278P-201ENST00000390945 ERBB3P21860 1342 aa7.11□□□□□ -1.27
RNU6-278P-201ENST00000390945 PSEN2P49810 448 aa7.11□□□□□ -1.27
RNU6-278P-201ENST00000390945 SKIV2LQ15477 1246 aaKnown RBP7.11□□□□□ -1.27
RNU6-278P-201ENST00000390945 KCNK17Q96T54 332 aa7.11□□□□□ -1.27
RNU6-278P-201ENST00000390945 KIAA1468Q9P260 1216 aa7.11□□□□□ -1.27
RNU6-278P-201ENST00000390945 CD46P15529 392 aa7.1□□□□□ -1.27
RNU6-278P-201ENST00000390945 VARS2Q5ST30 1063 aaKnown RBP7.1□□□□□ -1.27
RNU6-278P-201ENST00000390945 LCE2DQ5TA82 110 aaPredicted RBP7.1□□□□□ -1.27
RNU6-278P-201ENST00000390945 RSPH6AQ9H0K4 717 aa7.1□□□□□ -1.27
RNU6-278P-201ENST00000390945 TMEM134Q9H6X4 195 aa7.1□□□□□ -1.27
RNU6-278P-201ENST00000390945 RABGEF1Q9UJ41 708 aa7.1□□□□□ -1.27
RNU6-278P-201ENST00000390945 PNMA3Q9UL41 463 aa7.1□□□□□ -1.27
RNU6-278P-201ENST00000390945 BHMG1C9JSJ3 638 aaPredicted RBP7.09□□□□□ -1.27
RNU6-278P-201ENST00000390945 DNAJB2P25686 324 aa7.09□□□□□ -1.27
RNU6-278P-201ENST00000390945 PBX2P40425 430 aa7.09□□□□□ -1.27
RNU6-278P-201ENST00000390945 DMRTA1Q5VZB9 504 aa7.09□□□□□ -1.27
RNU6-278P-201ENST00000390945 NBPF26B4DH59 902 aa7.08□□□□□ -1.28
RNU6-278P-201ENST00000390945 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.08□□□□□ -1.28
RNU6-278P-201ENST00000390945 SMAPO00193 183 aa7.07□□□□□ -1.28
RNU6-278P-201ENST00000390945 MARVELD3Q96A59 401 aa7.07□□□□□ -1.28
RNU6-278P-201ENST00000390945 VPS9D1Q9Y2B5 631 aa7.07□□□□□ -1.28
RNU6-278P-201ENST00000390945 TUSC1Q2TAM9 212 aa7.06□□□□□ -1.28
RNU6-278P-201ENST00000390945 MYSM1Q5VVJ2 828 aa7.06□□□□□ -1.28
RNU6-278P-201ENST00000390945 PROCA1Q8NCQ7 364 aaPredicted RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms