RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 SCRIBQ14160 1630 aa4.48□□□□□ -1.69
TRAV41-201ENST00000390468 BCAMP50895 628 aa4.48□□□□□ -1.69
TRAV41-201ENST00000390468 ANKK1Q8NFD2 765 aa4.48□□□□□ -1.69
TRAV41-201ENST00000390468 SLC4A5Q9BY07 1137 aa4.48□□□□□ -1.69
TRAV41-201ENST00000390468 A0A0G2JS52 829 aa4.47□□□□□ -1.69
TRAV41-201ENST00000390468 EMILIN3Q9NT22 766 aa4.47□□□□□ -1.69
TRAV41-201ENST00000390468 PPP1R3GB7ZBB8 358 aa4.46□□□□□ -1.7
TRAV41-201ENST00000390468 GTPBP6O43824 516 aaPredicted RBP4.46□□□□□ -1.7
TRAV41-201ENST00000390468 COL9A1P20849 921 aa4.46□□□□□ -1.7
TRAV41-201ENST00000390468 RBM33Q96EV2 1170 aaKnown RBP4.46□□□□□ -1.7
TRAV41-201ENST00000390468 ANO8Q9HCE9 1232 aaPredicted RBP4.46□□□□□ -1.7
TRAV41-201ENST00000390468 SEPT9Q9UHD8 586 aaPredicted RBP4.46□□□□□ -1.7
TRAV41-201ENST00000390468 PCDHGA10Q9Y5H3 936 aa4.46□□□□□ -1.7
TRAV41-201ENST00000390468 DNAJC5Q9H3Z4 198 aa4.45□□□□□ -1.7
TRAV41-201ENST00000390468 KIAA1468Q9P260 1216 aa4.45□□□□□ -1.7
TRAV41-201ENST00000390468 SHROOM4Q9ULL8 1493 aa4.44□□□□□ -1.7
TRAV41-201ENST00000390468 TYW1BQ6NUM6 668 aa4.44□□□□□ -1.7
TRAV41-201ENST00000390468 Q6ZNB5 142 aa4.44□□□□□ -1.7
TRAV41-201ENST00000390468 CADPS2Q86UW7 1296 aa4.44□□□□□ -1.7
TRAV41-201ENST00000390468 RABGEF1Q9UJ41 708 aa4.44□□□□□ -1.7
TRAV41-201ENST00000390468 DPYSL4O14531 572 aa4.43□□□□□ -1.7
TRAV41-201ENST00000390468 DDX12PQ92771 950 aa4.43□□□□□ -1.7
TRAV41-201ENST00000390468 ZFRQ96KR1 1074 aaKnown RBP4.43□□□□□ -1.7
TRAV41-201ENST00000390468 WBP1LQ9NX94 342 aa4.43□□□□□ -1.7
TRAV41-201ENST00000390468 SOWAHBA6NEL2 793 aa4.42□□□□□ -1.7
TRAV41-201ENST00000390468 RGS20O76081 388 aa4.42□□□□□ -1.7
TRAV41-201ENST00000390468 PHF14O94880 888 aa4.42□□□□□ -1.7
TRAV41-201ENST00000390468 MFSD10Q14728 455 aa4.42□□□□□ -1.7
TRAV41-201ENST00000390468 IFFO2Q5TF58 517 aa4.42□□□□□ -1.7
TRAV41-201ENST00000390468 FBXW7Q969H0 707 aa4.42□□□□□ -1.7
TRAV41-201ENST00000390468 C6orf132Q5T0Z8 1188 aa4.41□□□□□ -1.7
TRAV41-201ENST00000390468 HPS5Q9UPZ3 1129 aa4.41□□□□□ -1.7
TRAV41-201ENST00000390468 MAP3K7O43318 606 aa4.4□□□□□ -1.71
TRAV41-201ENST00000390468 KCNC4Q03721 635 aa4.4□□□□□ -1.71
TRAV41-201ENST00000390468 LRCH3Q96II8 777 aa4.4□□□□□ -1.71
TRAV41-201ENST00000390468 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.4□□□□□ -1.71
TRAV41-201ENST00000390468 TRIM6-TRIM34B2RNG4 842 aa4.39□□□□□ -1.71
TRAV41-201ENST00000390468 RNF40O75150 1001 aa4.39□□□□□ -1.71
TRAV41-201ENST00000390468 ITGBL1O95965 494 aaPredicted RBP4.39□□□□□ -1.71
TRAV41-201ENST00000390468 NBR1Q14596 966 aa4.39□□□□□ -1.71
TRAV41-201ENST00000390468 LAPTM4BQ86VI4 370 aa4.39□□□□□ -1.71
TRAV41-201ENST00000390468 SMAPO00193 183 aa4.38□□□□□ -1.71
TRAV41-201ENST00000390468 FAM98CQ17RN3 349 aaKnown RBP4.38□□□□□ -1.71
TRAV41-201ENST00000390468 TSR1Q2NL82 804 aaKnown RBP4.38□□□□□ -1.71
TRAV41-201ENST00000390468 EPAS1Q99814 870 aa4.38□□□□□ -1.71
TRAV41-201ENST00000390468 TSR3Q9UJK0 312 aaKnown RBP4.38□□□□□ -1.71
TRAV41-201ENST00000390468 PPP4CP60510 307 aa4.36□□□□□ -1.71
TRAV41-201ENST00000390468 NYAP1Q6ZVC0 841 aa4.36□□□□□ -1.71
TRAV41-201ENST00000390468 PACS2Q86VP3 889 aa4.36□□□□□ -1.71
TRAV41-201ENST00000390468 GRXCR2A6NFK2 248 aa4.35□□□□□ -1.71
TRAV41-201ENST00000390468 GFRA3O60609 400 aa4.35□□□□□ -1.71
TRAV41-201ENST00000390468 TSKSQ9UJT2 592 aa4.35□□□□□ -1.71
TRAV41-201ENST00000390468 ONECUT3O60422 494 aaPredicted RBP4.34□□□□□ -1.71
TRAV41-201ENST00000390468 EN1Q05925 392 aaPredicted RBP4.34□□□□□ -1.71
TRAV41-201ENST00000390468 CAMK2BQ13554 666 aa4.34□□□□□ -1.71
TRAV41-201ENST00000390468 SAMD7Q7Z3H4 446 aa4.34□□□□□ -1.71
TRAV41-201ENST00000390468 BICRAQ9NZM4 1560 aa4.33□□□□□ -1.72
TRAV41-201ENST00000390468 CDCA7LQ96GN5 454 aa4.33□□□□□ -1.72
TRAV41-201ENST00000390468 PRKD2Q9BZL6 878 aa4.33□□□□□ -1.72
TRAV41-201ENST00000390468 PNMA3Q9UL41 463 aa4.33□□□□□ -1.72
TRAV41-201ENST00000390468 MTRQ99707 1265 aa4.32□□□□□ -1.72
TRAV41-201ENST00000390468 NBPF26B4DH59 902 aa4.31□□□□□ -1.72
TRAV41-201ENST00000390468 C3orf80F5H4A9 247 aa4.31□□□□□ -1.72
TRAV41-201ENST00000390468 PRSS12P56730 875 aa4.31□□□□□ -1.72
TRAV41-201ENST00000390468 TRAF7Q6Q0C0 670 aa4.31□□□□□ -1.72
TRAV41-201ENST00000390468 ZNF516Q92618 1163 aa4.31□□□□□ -1.72
TRAV41-201ENST00000390468 FAM198AQ9UFP1 575 aa4.31□□□□□ -1.72
TRAV41-201ENST00000390468 PRIM1P49642 420 aaKnown RBP4.3□□□□□ -1.72
TRAV41-201ENST00000390468 HDGFP51858 240 aaKnown RBP4.3□□□□□ -1.72
TRAV41-201ENST00000390468 COPS2P61201 443 aa4.3□□□□□ -1.72
TRAV41-201ENST00000390468 LAPTM4AQ15012 233 aa4.3□□□□□ -1.72
TRAV41-201ENST00000390468 PDIA6Q15084 440 aa4.3□□□□□ -1.72
TRAV41-201ENST00000390468 TJAP1Q5JTD0 557 aa4.3□□□□□ -1.72
TRAV41-201ENST00000390468 PPP1R18Q6NYC8 613 aa4.3□□□□□ -1.72
TRAV41-201ENST00000390468 NUDT18Q6ZVK8 323 aa4.3□□□□□ -1.72
TRAV41-201ENST00000390468 ERICH6Q7L0X2 663 aa4.3□□□□□ -1.72
TRAV41-201ENST00000390468 TATDN2Q93075 761 aa4.3□□□□□ -1.72
TRAV41-201ENST00000390468 CDHR5Q9HBB8 845 aa4.3□□□□□ -1.72
TRAV41-201ENST00000390468 IL21Q9HBE4 155 aa4.3□□□□□ -1.72
TRAV41-201ENST00000390468 SMARCA4P51532 1647 aa4.29□□□□□ -1.72
TRAV41-201ENST00000390468 LCE2BO14633 110 aa4.29□□□□□ -1.72
TRAV41-201ENST00000390468 NKX2-3Q8TAU0 364 aa4.29□□□□□ -1.72
TRAV41-201ENST00000390468 WDR70Q9NW82 654 aa4.29□□□□□ -1.72
TRAV41-201ENST00000390468 BAZ1AQ9NRL2 1556 aaPredicted RBP4.28□□□□□ -1.72
TRAV41-201ENST00000390468 SPDYE16A6NNV3 312 aaPredicted RBP4.28□□□□□ -1.72
TRAV41-201ENST00000390468 APLP1P51693 650 aa4.28□□□□□ -1.72
TRAV41-201ENST00000390468 E2F4Q16254 413 aa4.28□□□□□ -1.72
TRAV41-201ENST00000390468 BBXQ8WY36 941 aaPredicted RBP4.28□□□□□ -1.72
TRAV41-201ENST00000390468 CFAP44Q96MT7 982 aa4.28□□□□□ -1.72
TRAV41-201ENST00000390468 WIZO95785 1651 aa4.28□□□□□ -1.72
TRAV41-201ENST00000390468 NRG2O14511 850 aaPredicted RBP4.27□□□□□ -1.73
TRAV41-201ENST00000390468 SPRYD3Q8NCJ5 442 aa4.27□□□□□ -1.73
TRAV41-201ENST00000390468 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.27□□□□□ -1.73
TRAV41-201ENST00000390468 PDZRN3Q9UPQ7 1066 aa4.27□□□□□ -1.73
TRAV41-201ENST00000390468 SWT1Q5T5J6 900 aaKnown RBP4.26□□□□□ -1.73
TRAV41-201ENST00000390468 PADI6Q6TGC4 694 aa4.26□□□□□ -1.73
TRAV41-201ENST00000390468 PAXIP1Q6ZW49 1069 aaPredicted RBP4.26□□□□□ -1.73
TRAV41-201ENST00000390468 CERKQ8TCT0 537 aa4.26□□□□□ -1.73
TRAV41-201ENST00000390468 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.26□□□□□ -1.73
TRAV41-201ENST00000390468 GGCXP38435 758 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms