RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 ADGRL1O94910 1474 aa16.65■□□□□ 0.26
CAPRIN1-202ENST00000389645 CD109Q6YHK3 1445 aa16.65■□□□□ 0.26
CAPRIN1-202ENST00000389645 MRS2Q9HD23 443 aa16.65■□□□□ 0.26
CAPRIN1-202ENST00000389645 WASHC2AQ641Q2 1341 aa16.63■□□□□ 0.25
CAPRIN1-202ENST00000389645 MAST1Q9Y2H9 1570 aa16.63■□□□□ 0.25
CAPRIN1-202ENST00000389645 RGL3Q3MIN7 710 aa16.62■□□□□ 0.25
CAPRIN1-202ENST00000389645 FAM135AQ9P2D6 1515 aa16.62■□□□□ 0.25
CAPRIN1-202ENST00000389645 TEX14Q8IWB6 1497 aa16.61■□□□□ 0.25
CAPRIN1-202ENST00000389645 KIF3BO15066 747 aa16.61■□□□□ 0.25
CAPRIN1-202ENST00000389645 RAPGEF3O95398 923 aa16.6■□□□□ 0.25
CAPRIN1-202ENST00000389645 DUOX2Q9NRD8 1548 aa16.6■□□□□ 0.25
CAPRIN1-202ENST00000389645 ANO8Q9HCE9 1232 aaPredicted RBP16.6■□□□□ 0.25
CAPRIN1-202ENST00000389645 ARAP3Q8WWN8 1544 aa16.59■□□□□ 0.25
CAPRIN1-202ENST00000389645 DCAF11Q8TEB1 546 aa16.59■□□□□ 0.25
CAPRIN1-202ENST00000389645 PLXNC1O60486 1568 aa16.58■□□□□ 0.25
CAPRIN1-202ENST00000389645 CCDC184Q52MB2 194 aa16.58■□□□□ 0.24
CAPRIN1-202ENST00000389645 RIMBP3CA6NJZ7 1639 aa16.57■□□□□ 0.24
CAPRIN1-202ENST00000389645 RIMBP3BA6NNM3 1639 aa16.57■□□□□ 0.24
CAPRIN1-202ENST00000389645 RIMBP3Q9UFD9 1639 aa16.57■□□□□ 0.24
CAPRIN1-202ENST00000389645 KDM5DQ9BY66 1539 aa16.57■□□□□ 0.24
CAPRIN1-202ENST00000389645 C11orf95C9JLR9 678 aaPredicted RBP16.56■□□□□ 0.24
CAPRIN1-202ENST00000389645 ZFYVE16Q7Z3T8 1539 aa16.56■□□□□ 0.24
CAPRIN1-202ENST00000389645 ERICH6Q7L0X2 663 aa16.55■□□□□ 0.24
CAPRIN1-202ENST00000389645 ERBINQ96RT1 1412 aa16.55■□□□□ 0.24
CAPRIN1-202ENST00000389645 FAM69CQ0P6D2 419 aa16.55■□□□□ 0.24
CAPRIN1-202ENST00000389645 RTEL1-TNFRSF6BF6WH68 1400 aa16.54■□□□□ 0.24
CAPRIN1-202ENST00000389645 ATP7AQ04656 1500 aa16.54■□□□□ 0.24
CAPRIN1-202ENST00000389645 PLA2R1Q13018 1463 aa16.53■□□□□ 0.24
CAPRIN1-202ENST00000389645 CCDC144AA2RUR9 1427 aa16.52■□□□□ 0.23
CAPRIN1-202ENST00000389645 UNC13BO14795 1591 aa16.51■□□□□ 0.23
CAPRIN1-202ENST00000389645 GGT6Q6P531 493 aa16.5■□□□□ 0.23
CAPRIN1-202ENST00000389645 DHX29Q7Z478 1369 aaKnown RBP16.49■□□□□ 0.23
CAPRIN1-202ENST00000389645 SALL2Q9Y467 1007 aaPredicted RBP16.49■□□□□ 0.23
CAPRIN1-202ENST00000389645 PRKRIP1Q9H875 184 aaPredicted RBP16.48■□□□□ 0.23
CAPRIN1-202ENST00000389645 ZNF518AQ6AHZ1 1483 aa16.48■□□□□ 0.23
CAPRIN1-202ENST00000389645 CCDC136Q96JN2 1154 aa16.48■□□□□ 0.23
CAPRIN1-202ENST00000389645 INO80Q9ULG1 1556 aaPredicted RBP16.47■□□□□ 0.23
CAPRIN1-202ENST00000389645 IQGAP3Q86VI3 1631 aa16.47■□□□□ 0.23
CAPRIN1-202ENST00000389645 CARD11Q9BXL7 1154 aa16.47■□□□□ 0.23
CAPRIN1-202ENST00000389645 POGZQ7Z3K3 1410 aa16.46■□□□□ 0.23
CAPRIN1-202ENST00000389645 KIDINS220Q9ULH0 1771 aa16.45■□□□□ 0.22
CAPRIN1-202ENST00000389645 KIF7Q2M1P5 1343 aa16.45■□□□□ 0.22
CAPRIN1-202ENST00000389645 MAGI2Q86UL8 1455 aa16.44■□□□□ 0.22
CAPRIN1-202ENST00000389645 CCDC7Q96M83 1385 aa16.44■□□□□ 0.22
CAPRIN1-202ENST00000389645 NBPF1Q3BBV0 1214 aa16.44■□□□□ 0.22
CAPRIN1-202ENST00000389645 KANK1Q14678 1352 aa16.43■□□□□ 0.22
CAPRIN1-202ENST00000389645 RBM19Q9Y4C8 960 aaKnown RBP16.42■□□□□ 0.22
CAPRIN1-202ENST00000389645 USP47Q96K76 1375 aa16.42■□□□□ 0.22
CAPRIN1-202ENST00000389645 TMC1Q8TDI8 760 aa16.42■□□□□ 0.22
CAPRIN1-202ENST00000389645 A2MP01023 1474 aa16.41■□□□□ 0.22
CAPRIN1-202ENST00000389645 B4GALNT3Q6L9W6 998 aa16.41■□□□□ 0.22
CAPRIN1-202ENST00000389645 SPATA31E1Q6ZUB1 1445 aa16.41■□□□□ 0.22
CAPRIN1-202ENST00000389645 TSPOAP1O95153 1857 aa16.39■□□□□ 0.22
CAPRIN1-202ENST00000389645 E9PCH4 1651 aa16.39■□□□□ 0.21
CAPRIN1-202ENST00000389645 ST20-MTHFSA0A0A6YYL1 179 aa16.39■□□□□ 0.21
CAPRIN1-202ENST00000389645 CNTLNQ9NXG0 1405 aa16.38■□□□□ 0.21
CAPRIN1-202ENST00000389645 NEO1Q92859 1461 aa16.38■□□□□ 0.21
CAPRIN1-202ENST00000389645 ROCK2O75116 1388 aaKnown RBP16.37■□□□□ 0.21
CAPRIN1-202ENST00000389645 UHRF1BP1Q6BDS2 1440 aa16.37■□□□□ 0.21
CAPRIN1-202ENST00000389645 ATP10AO60312 1499 aa16.37■□□□□ 0.21
CAPRIN1-202ENST00000389645 MLH3Q9UHC1 1453 aa16.37■□□□□ 0.21
CAPRIN1-202ENST00000389645 YEATS2Q9ULM3 1422 aa16.37■□□□□ 0.21
CAPRIN1-202ENST00000389645 WASHC2CQ9Y4E1 1318 aa16.37■□□□□ 0.21
CAPRIN1-202ENST00000389645 CFAP65Q6ZU64 1925 aaKnown RBP16.36■□□□□ 0.21
CAPRIN1-202ENST00000389645 KDM5CP41229 1560 aa16.36■□□□□ 0.21
CAPRIN1-202ENST00000389645 CFAP74Q9C0B2 1584 aa16.36■□□□□ 0.21
CAPRIN1-202ENST00000389645 CHGAP10645 457 aaKnown RBP16.36■□□□□ 0.21
CAPRIN1-202ENST00000389645 MAP3K4Q9Y6R4 1608 aa16.35■□□□□ 0.21
CAPRIN1-202ENST00000389645 DEPDC5O75140 1603 aa16.35■□□□□ 0.21
CAPRIN1-202ENST00000389645 MROH1Q8NDA8 1641 aa16.35■□□□□ 0.21
CAPRIN1-202ENST00000389645 HECW2Q9P2P5 1572 aa16.34■□□□□ 0.21
CAPRIN1-202ENST00000389645 FRMPD1Q5SYB0 1578 aa16.34■□□□□ 0.21
CAPRIN1-202ENST00000389645 PRAG1Q86YV5 1406 aa16.34■□□□□ 0.21
CAPRIN1-202ENST00000389645 UGGT1Q9NYU2 1555 aa16.34■□□□□ 0.21
CAPRIN1-202ENST00000389645 RALGAPBQ86X10 1494 aa16.33■□□□□ 0.21
CAPRIN1-202ENST00000389645 ABCA6Q8N139 1617 aa16.33■□□□□ 0.2
CAPRIN1-202ENST00000389645 DIP2BQ9P265 1576 aa16.33■□□□□ 0.2
CAPRIN1-202ENST00000389645 VWDEQ8N2E2 1590 aa16.31■□□□□ 0.2
CAPRIN1-202ENST00000389645 PTPRTO14522 1441 aa16.31■□□□□ 0.2
CAPRIN1-202ENST00000389645 PRDM15P57071 1507 aaPredicted RBP16.31■□□□□ 0.2
CAPRIN1-202ENST00000389645 SENP3Q9H4L4 574 aaPredicted RBP16.31■□□□□ 0.2
CAPRIN1-202ENST00000389645 TET3O43151 1660 aa16.3■□□□□ 0.2
CAPRIN1-202ENST00000389645 GLI2P10070 1586 aa16.3■□□□□ 0.2
CAPRIN1-202ENST00000389645 BCORL1Q5H9F3 1711 aa16.3■□□□□ 0.2
CAPRIN1-202ENST00000389645 CLTCL1P53675 1640 aa16.29■□□□□ 0.2
CAPRIN1-202ENST00000389645 EIF2AK4Q9P2K8 1649 aaKnown RBP16.29■□□□□ 0.2
CAPRIN1-202ENST00000389645 CEP152O94986 1710 aa16.28■□□□□ 0.2
CAPRIN1-202ENST00000389645 TRPM2O94759 1503 aa16.28■□□□□ 0.2
CAPRIN1-202ENST00000389645 MLECQ14165 292 aa16.28■□□□□ 0.2
CAPRIN1-202ENST00000389645 SPHKAPQ2M3C7 1700 aa16.28■□□□□ 0.2
CAPRIN1-202ENST00000389645 RICTORQ6R327 1708 aa16.28■□□□□ 0.2
CAPRIN1-202ENST00000389645 PPP4R2Q9NY27 417 aa16.28■□□□□ 0.2
CAPRIN1-202ENST00000389645 DIP2CQ9Y2E4 1556 aa16.27■□□□□ 0.19
CAPRIN1-202ENST00000389645 PPRC1Q5VV67 1664 aaKnown RBP16.27■□□□□ 0.19
CAPRIN1-202ENST00000389645 NUTM2DQ5VT03 806 aaPredicted RBP16.27■□□□□ 0.19
CAPRIN1-202ENST00000389645 NPATQ14207 1427 aa16.26■□□□□ 0.19
CAPRIN1-202ENST00000389645 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.26■□□□□ 0.19
CAPRIN1-202ENST00000389645 CC2D1BQ5T0F9 858 aaKnown RBP16.26■□□□□ 0.19
CAPRIN1-202ENST00000389645 EFCAB6Q5THR3 1501 aa16.25■□□□□ 0.19
CAPRIN1-202ENST00000389645 ADGRF5Q8IZF2 1346 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms