RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 FCHSD2O94868 740 aa7.63□□□□□ -1.19
RNU6-39P-201ENST00000384344 PBX2P40425 430 aa7.63□□□□□ -1.19
RNU6-39P-201ENST00000384344 C6orf132Q5T0Z8 1188 aa7.62□□□□□ -1.19
RNU6-39P-201ENST00000384344 ADAM33Q9BZ11 813 aa7.62□□□□□ -1.19
RNU6-39P-201ENST00000384344 HS3ST6Q96QI5 342 aa7.61□□□□□ -1.19
RNU6-39P-201ENST00000384344 TPRNQ4KMQ1 711 aa7.6□□□□□ -1.19
RNU6-39P-201ENST00000384344 ZNF687Q8N1G0 1237 aa7.6□□□□□ -1.19
RNU6-39P-201ENST00000384344 KCNK17Q96T54 332 aa7.6□□□□□ -1.19
RNU6-39P-201ENST00000384344 PPP1R3GB7ZBB8 358 aa7.59□□□□□ -1.19
RNU6-39P-201ENST00000384344 ARHGAP33O14559 1287 aa7.59□□□□□ -1.19
RNU6-39P-201ENST00000384344 HIC1Q14526 733 aa7.59□□□□□ -1.19
RNU6-39P-201ENST00000384344 TSR1Q2NL82 804 aaKnown RBP7.59□□□□□ -1.19
RNU6-39P-201ENST00000384344 PRIM1P49642 420 aaKnown RBP7.58□□□□□ -1.2
RNU6-39P-201ENST00000384344 ZC3H15Q8WU90 426 aaKnown RBP7.58□□□□□ -1.2
RNU6-39P-201ENST00000384344 GNPATO15228 680 aa7.57□□□□□ -1.2
RNU6-39P-201ENST00000384344 PTGDRQ13258 359 aa7.57□□□□□ -1.2
RNU6-39P-201ENST00000384344 CDHR5Q9HBB8 845 aa7.57□□□□□ -1.2
RNU6-39P-201ENST00000384344 KRI1Q8N9T8 703 aaKnown RBP7.56□□□□□ -1.2
RNU6-39P-201ENST00000384344 RBM27Q9P2N5 1060 aaKnown RBP7.56□□□□□ -1.2
RNU6-39P-201ENST00000384344 CDAN1Q8IWY9 1227 aa7.55□□□□□ -1.2
RNU6-39P-201ENST00000384344 ZMYND10O75800 440 aa7.53□□□□□ -1.2
RNU6-39P-201ENST00000384344 PSEN2P49810 448 aa7.53□□□□□ -1.2
RNU6-39P-201ENST00000384344 PRSS12P56730 875 aa7.53□□□□□ -1.2
RNU6-39P-201ENST00000384344 CDCA7LQ96GN5 454 aa7.53□□□□□ -1.2
RNU6-39P-201ENST00000384344 GPR37O15354 613 aa7.52□□□□□ -1.21
RNU6-39P-201ENST00000384344 COL9A1P20849 921 aa7.52□□□□□ -1.21
RNU6-39P-201ENST00000384344 BARGINQ6ZT62 677 aa7.52□□□□□ -1.21
RNU6-39P-201ENST00000384344 PACS2Q86VP3 889 aa7.52□□□□□ -1.21
RNU6-39P-201ENST00000384344 NPDC1Q9NQX5 325 aaPredicted RBP7.52□□□□□ -1.21
RNU6-39P-201ENST00000384344 AXIN2Q9Y2T1 843 aa7.52□□□□□ -1.21
RNU6-39P-201ENST00000384344 MAP2K5Q13163 448 aa7.51□□□□□ -1.21
RNU6-39P-201ENST00000384344 STAC3Q96MF2 364 aa7.51□□□□□ -1.21
RNU6-39P-201ENST00000384344 SLC4A5Q9BY07 1137 aa7.51□□□□□ -1.21
RNU6-39P-201ENST00000384344 MINK1Q8N4C8 1332 aaPredicted RBP7.51□□□□□ -1.21
RNU6-39P-201ENST00000384344 POTEB3A0JP26 581 aa7.5□□□□□ -1.21
RNU6-39P-201ENST00000384344 TRIM6-TRIM34B2RNG4 842 aa7.5□□□□□ -1.21
RNU6-39P-201ENST00000384344 NBPF26B4DH59 902 aa7.5□□□□□ -1.21
RNU6-39P-201ENST00000384344 ONECUT3O60422 494 aaPredicted RBP7.5□□□□□ -1.21
RNU6-39P-201ENST00000384344 LSM11P83369 360 aaKnown RBP eCLIP7.5□□□□□ -1.21
RNU6-39P-201ENST00000384344 POTEBQ6S5H4 581 aa7.5□□□□□ -1.21
RNU6-39P-201ENST00000384344 PADI6Q6TGC4 694 aa7.5□□□□□ -1.21
RNU6-39P-201ENST00000384344 ZBED2Q9BTP6 218 aa7.5□□□□□ -1.21
RNU6-39P-201ENST00000384344 TK2O00142 265 aa7.49□□□□□ -1.21
RNU6-39P-201ENST00000384344 OATP04181 439 aa7.49□□□□□ -1.21
RNU6-39P-201ENST00000384344 NBPF3Q9H094 633 aa7.49□□□□□ -1.21
RNU6-39P-201ENST00000384344 DMRTA1Q5VZB9 504 aa7.48□□□□□ -1.21
RNU6-39P-201ENST00000384344 ANKRD13DQ6ZTN6 518 aa7.48□□□□□ -1.21
RNU6-39P-201ENST00000384344 RBM46Q8TBY0 533 aaKnown RBP7.48□□□□□ -1.21
RNU6-39P-201ENST00000384344 IRF6O14896 467 aa7.47□□□□□ -1.21
RNU6-39P-201ENST00000384344 PRKCSHP14314 528 aaPredicted RBP7.47□□□□□ -1.21
RNU6-39P-201ENST00000384344 PROX2Q3B8N5 592 aa7.47□□□□□ -1.21
RNU6-39P-201ENST00000384344 POTEEQ6S8J3 1075 aa7.47□□□□□ -1.21
RNU6-39P-201ENST00000384344 AK7Q96M32 723 aa7.47□□□□□ -1.21
RNU6-39P-201ENST00000384344 RABGEF1Q9UJ41 708 aa7.47□□□□□ -1.21
RNU6-39P-201ENST00000384344 TTC13Q8NBP0 860 aa7.46□□□□□ -1.22
RNU6-39P-201ENST00000384344 KIAA1468Q9P260 1216 aa7.46□□□□□ -1.22
RNU6-39P-201ENST00000384344 VPS9D1Q9Y2B5 631 aa7.46□□□□□ -1.22
RNU6-39P-201ENST00000384344 FECHP22830 423 aa7.45□□□□□ -1.22
RNU6-39P-201ENST00000384344 MMRN1Q13201 1228 aa7.45□□□□□ -1.22
RNU6-39P-201ENST00000384344 ADGRD1Q6QNK2 874 aa7.45□□□□□ -1.22
RNU6-39P-201ENST00000384344 CCDC102AQ96A19 550 aa7.45□□□□□ -1.22
RNU6-39P-201ENST00000384344 SLC24A3Q9HC58 644 aa7.45□□□□□ -1.22
RNU6-39P-201ENST00000384344 TSKSQ9UJT2 592 aa7.45□□□□□ -1.22
RNU6-39P-201ENST00000384344 PNMA3Q9UL41 463 aa7.45□□□□□ -1.22
RNU6-39P-201ENST00000384344 SLC4A3P48751 1232 aa7.44□□□□□ -1.22
RNU6-39P-201ENST00000384344 MRPL50Q8N5N7 158 aaKnown RBP7.44□□□□□ -1.22
RNU6-39P-201ENST00000384344 TATDN2Q93075 761 aa7.44□□□□□ -1.22
RNU6-39P-201ENST00000384344 ADGRG1Q9Y653 693 aa7.44□□□□□ -1.22
RNU6-39P-201ENST00000384344 GOLGA8CPA6NN73 597 aa7.43□□□□□ -1.22
RNU6-39P-201ENST00000384344 HDGFP51858 240 aaKnown RBP7.43□□□□□ -1.22
RNU6-39P-201ENST00000384344 NUDT18Q6ZVK8 323 aa7.43□□□□□ -1.22
RNU6-39P-201ENST00000384344 LAPTM4BQ86VI4 370 aa7.42□□□□□ -1.22
RNU6-39P-201ENST00000384344 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.41□□□□□ -1.22
RNU6-39P-201ENST00000384344 DNAJB2P25686 324 aa7.41□□□□□ -1.22
RNU6-39P-201ENST00000384344 FAM98CQ17RN3 349 aaKnown RBP7.41□□□□□ -1.22
RNU6-39P-201ENST00000384344 METTL3Q86U44 580 aaKnown RBP7.41□□□□□ -1.22
RNU6-39P-201ENST00000384344 KRTAP3-3Q9BYR6 98 aa7.41□□□□□ -1.22
RNU6-39P-201ENST00000384344 KRTAP3-2Q9BYR7 98 aa7.41□□□□□ -1.22
RNU6-39P-201ENST00000384344 FAM198AQ9UFP1 575 aa7.41□□□□□ -1.22
RNU6-39P-201ENST00000384344 FAM161AQ3B820 660 aa7.4□□□□□ -1.22
RNU6-39P-201ENST00000384344 PXYLP1Q8TE99 480 aa7.4□□□□□ -1.22
RNU6-39P-201ENST00000384344 SEPT9Q9UHD8 586 aaPredicted RBP7.4□□□□□ -1.22
RNU6-39P-201ENST00000384344 TRIM66O15016 1216 aa7.39□□□□□ -1.23
RNU6-39P-201ENST00000384344 CLCN1P35523 988 aa7.39□□□□□ -1.23
RNU6-39P-201ENST00000384344 TTLL12Q14166 644 aaPredicted RBP7.39□□□□□ -1.23
RNU6-39P-201ENST00000384344 SPNS2Q8IVW8 549 aa7.39□□□□□ -1.23
RNU6-39P-201ENST00000384344 SMAPO00193 183 aa7.38□□□□□ -1.23
RNU6-39P-201ENST00000384344 RSPH4AQ5TD94 716 aa7.38□□□□□ -1.23
RNU6-39P-201ENST00000384344 EYA1Q99502 592 aa7.38□□□□□ -1.23
RNU6-39P-201ENST00000384344 RCCD1A6NED2 376 aa7.37□□□□□ -1.23
RNU6-39P-201ENST00000384344 BHMG1C9JSJ3 638 aaPredicted RBP7.37□□□□□ -1.23
RNU6-39P-201ENST00000384344 HRO43593 1189 aa7.37□□□□□ -1.23
RNU6-39P-201ENST00000384344 AMHR2Q16671 573 aa7.37□□□□□ -1.23
RNU6-39P-201ENST00000384344 ANKK1Q8NFD2 765 aa7.37□□□□□ -1.23
RNU6-39P-201ENST00000384344 PDE4DQ08499 809 aa7.36□□□□□ -1.23
RNU6-39P-201ENST00000384344 NECTIN2Q92692 538 aa7.36□□□□□ -1.23
RNU6-39P-201ENST00000384344 MDM2Q00987 491 aaPredicted RBP7.35□□□□□ -1.23
RNU6-39P-201ENST00000384344 NEUROD2Q15784 382 aa7.35□□□□□ -1.23
RNU6-39P-201ENST00000384344 SULF1Q8IWU6 871 aa7.35□□□□□ -1.23
RNU6-39P-201ENST00000384344 LRCH3Q96II8 777 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms