RNA–Protein interactions for RNA: ENST00000382194.6

SMARCA2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMARCA2, Length 5,679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-208ENST00000382194 SMC4Q9NTJ3 1288 aa17.32■□□□□ 0.36
SMARCA2-208ENST00000382194 ROCK2O75116 1388 aaKnown RBP17.32■□□□□ 0.36
SMARCA2-208ENST00000382194 TNIKQ9UKE5 1360 aa17.32■□□□□ 0.36
SMARCA2-208ENST00000382194 WASHC2CQ9Y4E1 1318 aa17.31■□□□□ 0.36
SMARCA2-208ENST00000382194 B4GALNT3Q6L9W6 998 aa17.31■□□□□ 0.36
SMARCA2-208ENST00000382194 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.31■□□□□ 0.36
SMARCA2-208ENST00000382194 ANKRD30AQ9BXX3 1397 aa17.3■□□□□ 0.36
SMARCA2-208ENST00000382194 TTC5Q8N0Z6 440 aa17.3■□□□□ 0.36
SMARCA2-208ENST00000382194 PES1O00541 588 aaKnown RBP17.3■□□□□ 0.36
SMARCA2-208ENST00000382194 KIF3BO15066 747 aa17.3■□□□□ 0.36
SMARCA2-208ENST00000382194 SIN3AQ96ST3 1273 aa17.3■□□□□ 0.36
SMARCA2-208ENST00000382194 LTV1Q96GA3 475 aaPredicted RBP17.3■□□□□ 0.36
SMARCA2-208ENST00000382194 CARMIL1Q5VZK9 1371 aa17.3■□□□□ 0.36
SMARCA2-208ENST00000382194 CCDC70Q6NSX1 233 aa17.3■□□□□ 0.36
SMARCA2-208ENST00000382194 CCDC43Q96MW1 224 aaKnown RBP17.3■□□□□ 0.36
SMARCA2-208ENST00000382194 RSPH4AQ5TD94 716 aa17.29■□□□□ 0.36
SMARCA2-208ENST00000382194 NEXNQ0ZGT2 675 aa17.29■□□□□ 0.36
SMARCA2-208ENST00000382194 ST18O60284 1047 aa17.28■□□□□ 0.36
SMARCA2-208ENST00000382194 FOXD1Q16676 465 aa17.27■□□□□ 0.36
SMARCA2-208ENST00000382194 TNNT3P45378 269 aaPredicted RBP17.27■□□□□ 0.36
SMARCA2-208ENST00000382194 H3BQV1 296 aa17.27■□□□□ 0.35
SMARCA2-208ENST00000382194 IFFO2Q5TF58 517 aa17.27■□□□□ 0.35
SMARCA2-208ENST00000382194 PHF23Q9BUL5 403 aaPredicted RBP17.27■□□□□ 0.35
SMARCA2-208ENST00000382194 RAD21O60216 631 aa17.26■□□□□ 0.35
SMARCA2-208ENST00000382194 FAM184AQ8NB25 1140 aa17.25■□□□□ 0.35
SMARCA2-208ENST00000382194 TEFQ10587 303 aa17.25■□□□□ 0.35
SMARCA2-208ENST00000382194 VPS37DQ86XT2 251 aa17.25■□□□□ 0.35
SMARCA2-208ENST00000382194 WWC1Q8IX03 1113 aa17.25■□□□□ 0.35
SMARCA2-208ENST00000382194 R3HCC1Q9Y3T6 440 aaKnown RBP17.25■□□□□ 0.35
SMARCA2-208ENST00000382194 CCER2I3L3R5 266 aa17.25■□□□□ 0.35
SMARCA2-208ENST00000382194 NUP155O75694 1391 aa17.24■□□□□ 0.35
SMARCA2-208ENST00000382194 TRIM29Q14134 588 aa17.24■□□□□ 0.35
SMARCA2-208ENST00000382194 ATP6V1DQ9Y5K8 247 aa17.24■□□□□ 0.35
SMARCA2-208ENST00000382194 ANKRD20A12PQ8NF67 263 aa17.24■□□□□ 0.35
SMARCA2-208ENST00000382194 IPO7O95373 1038 aaKnown RBP17.23■□□□□ 0.35
SMARCA2-208ENST00000382194 ARHGAP35Q9NRY4 1499 aa17.23■□□□□ 0.35
SMARCA2-208ENST00000382194 PDS5BQ9NTI5 1447 aa17.23■□□□□ 0.35
SMARCA2-208ENST00000382194 DHX16O60231 1041 aaKnown RBP17.23■□□□□ 0.35
SMARCA2-208ENST00000382194 KLHL34Q8N239 644 aa17.23■□□□□ 0.35
SMARCA2-208ENST00000382194 RCAN3Q9UKA8 241 aa17.22■□□□□ 0.35
SMARCA2-208ENST00000382194 CUX2O14529 1486 aa17.22■□□□□ 0.35
SMARCA2-208ENST00000382194 SETQ01105 290 aaPredicted RBP17.21■□□□□ 0.34
SMARCA2-208ENST00000382194 COG3Q96JB2 828 aa17.21■□□□□ 0.34
SMARCA2-208ENST00000382194 FBXW7Q969H0 707 aa17.2■□□□□ 0.34
SMARCA2-208ENST00000382194 RBM33Q96EV2 1170 aaKnown RBP17.2■□□□□ 0.34
SMARCA2-208ENST00000382194 MFAP1P55081 439 aaKnown RBP17.19■□□□□ 0.34
SMARCA2-208ENST00000382194 RUFY2Q8WXA3 655 aa17.19■□□□□ 0.34
SMARCA2-208ENST00000382194 HSPA5P11021 654 aaKnown RBP17.19■□□□□ 0.34
SMARCA2-208ENST00000382194 DDX58O95786 925 aaKnown RBP17.19■□□□□ 0.34
SMARCA2-208ENST00000382194 HOOK1Q9UJC3 728 aaKnown RBP17.18■□□□□ 0.34
SMARCA2-208ENST00000382194 UACAQ9BZF9 1416 aa17.18■□□□□ 0.34
SMARCA2-208ENST00000382194 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.18■□□□□ 0.346e-6■■■■■ 56.9
SMARCA2-208ENST00000382194 CENPJQ9HC77 1338 aaPredicted RBP17.17■□□□□ 0.34
SMARCA2-208ENST00000382194 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.17■□□□□ 0.34
SMARCA2-208ENST00000382194 GOLGA6L19H0YKK7 550 aa17.17■□□□□ 0.34
SMARCA2-208ENST00000382194 GPS2Q13227 327 aa17.17■□□□□ 0.34
SMARCA2-208ENST00000382194 TRDNQ13061 729 aa17.16■□□□□ 0.34
SMARCA2-208ENST00000382194 AMER1Q5JTC6 1135 aaPredicted RBP17.16■□□□□ 0.34
SMARCA2-208ENST00000382194 PHLDB1Q86UU1 1377 aa17.16■□□□□ 0.34
SMARCA2-208ENST00000382194 WWC2Q6AWC2 1192 aa17.16■□□□□ 0.34
SMARCA2-208ENST00000382194 ERICH2A1L162 156 aa17.16■□□□□ 0.34
SMARCA2-208ENST00000382194 PCMTD1Q96MG8 357 aaPredicted RBP17.16■□□□□ 0.34
SMARCA2-208ENST00000382194 SETD5Q9C0A6 1442 aa17.15■□□□□ 0.34
SMARCA2-208ENST00000382194 DIAPH3Q9NSV4 1193 aa17.15■□□□□ 0.34
SMARCA2-208ENST00000382194 BECN2A8MW95 431 aa17.14■□□□□ 0.34
SMARCA2-208ENST00000382194 SYTL4Q96C24 671 aaPredicted RBP17.14■□□□□ 0.33
SMARCA2-208ENST00000382194 VGFO15240 615 aaPredicted RBP17.14■□□□□ 0.33
SMARCA2-208ENST00000382194 NOL8Q76FK4 1167 aaKnown RBP17.14■□□□□ 0.33
SMARCA2-208ENST00000382194 RTN4Q9NQC3 1192 aaKnown RBP17.14■□□□□ 0.33
SMARCA2-208ENST00000382194 NUTM2FA1L443 756 aa17.13■□□□□ 0.33
SMARCA2-208ENST00000382194 CPLX1O14810 134 aa17.13■□□□□ 0.33
SMARCA2-208ENST00000382194 C9orf78Q9NZ63 289 aaPredicted RBP17.13■□□□□ 0.33
SMARCA2-208ENST00000382194 ODF2Q5BJF6 829 aa17.13■□□□□ 0.33
SMARCA2-208ENST00000382194 FMN1Q68DA7 1419 aa17.13■□□□□ 0.33
SMARCA2-208ENST00000382194 CCAR1Q8IX12 1150 aaKnown RBP17.12■□□□□ 0.33
SMARCA2-208ENST00000382194 GOLGA6L3A6NEY3 463 aa17.12■□□□□ 0.33
SMARCA2-208ENST00000382194 APPP05067 770 aa17.12■□□□□ 0.33
SMARCA2-208ENST00000382194 ZKSCAN1P17029 563 aaPredicted RBP17.12■□□□□ 0.33
SMARCA2-208ENST00000382194 PDE3BQ13370 1112 aa17.12■□□□□ 0.33
SMARCA2-208ENST00000382194 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.12■□□□□ 0.33
SMARCA2-208ENST00000382194 SF3B2Q13435 895 aaKnown RBP17.12■□□□□ 0.33
SMARCA2-208ENST00000382194 RDXP35241 583 aaKnown RBP17.12■□□□□ 0.33
SMARCA2-208ENST00000382194 CT47A1Q5JQC4 288 aaPredicted RBP17.12■□□□□ 0.33
SMARCA2-208ENST00000382194 SLKQ9H2G2 1235 aaPredicted RBP17.11■□□□□ 0.33
SMARCA2-208ENST00000382194 CDR1P51861 262 aa17.11■□□□□ 0.33
SMARCA2-208ENST00000382194 PSME1Q06323 249 aa17.1■□□□□ 0.33
SMARCA2-208ENST00000382194 RILPL2Q969X0 211 aa17.1■□□□□ 0.33
SMARCA2-208ENST00000382194 GZF1Q9H116 711 aaPredicted RBP17.09■□□□□ 0.33
SMARCA2-208ENST00000382194 ATF3P18847 181 aa17.09■□□□□ 0.33
SMARCA2-208ENST00000382194 EVC2Q86UK5 1308 aa17.09■□□□□ 0.33
SMARCA2-208ENST00000382194 RNF20Q5VTR2 975 aa17.09■□□□□ 0.33
SMARCA2-208ENST00000382194 MPHOSPH9Q99550 1183 aa17.09■□□□□ 0.33
SMARCA2-208ENST00000382194 MCTP1Q6DN14 999 aa17.08■□□□□ 0.33
SMARCA2-208ENST00000382194 FBXO3Q9UK99 471 aa17.08■□□□□ 0.32
SMARCA2-208ENST00000382194 IFIT2P09913 472 aaKnown RBP17.07■□□□□ 0.32
SMARCA2-208ENST00000382194 NLRP13Q86W25 1043 aa17.07■□□□□ 0.32
SMARCA2-208ENST00000382194 SAFBQ15424 915 aaKnown RBP eCLIP17.07■□□□□ 0.32
SMARCA2-208ENST00000382194 RRP12Q5JTH9 1297 aaKnown RBP17.07■□□□□ 0.32
SMARCA2-208ENST00000382194 NUTM2DQ5VT03 806 aaPredicted RBP17.07■□□□□ 0.32
SMARCA2-208ENST00000382194 PAF1Q8N7H5 531 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms