RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 CDC42BPBQ9Y5S2 1711 aa22.09■■□□□ 1.13
VPS16-203ENST00000380469 FAM135AQ9P2D6 1515 aa22.09■■□□□ 1.13
VPS16-203ENST00000380469 KTN1Q86UP2 1357 aaKnown RBP22.08■■□□□ 1.13
VPS16-203ENST00000380469 RALBP1Q15311 655 aa22.06■■□□□ 1.12
VPS16-203ENST00000380469 CCDC144AA2RUR9 1427 aa22.05■■□□□ 1.12
VPS16-203ENST00000380469 MYBBP1AQ9BQG0 1328 aaKnown RBP22.04■■□□□ 1.12
VPS16-203ENST00000380469 BRD4O60885 1362 aaPredicted RBP22.03■■□□□ 1.12
VPS16-203ENST00000380469 MSH5O43196 834 aa22.02■■□□□ 1.12
VPS16-203ENST00000380469 ARHGAP5Q13017 1502 aa22.01■■□□□ 1.11
VPS16-203ENST00000380469 RNF123Q5XPI4 1314 aa22.01■■□□□ 1.11
VPS16-203ENST00000380469 MAST1Q9Y2H9 1570 aa22.01■■□□□ 1.11
VPS16-203ENST00000380469 SYCP2Q9BX26 1530 aa22■■□□□ 1.11
VPS16-203ENST00000380469 PRAG1Q86YV5 1406 aa22■■□□□ 1.11
VPS16-203ENST00000380469 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.98■■□□□ 1.11
VPS16-203ENST00000380469 LRPPRCP42704 1394 aaKnown RBP21.98■■□□□ 1.11
VPS16-203ENST00000380469 TRPM1Q7Z4N2 1603 aa21.98■■□□□ 1.11
VPS16-203ENST00000380469 RGL3Q3MIN7 710 aa21.98■■□□□ 1.11
VPS16-203ENST00000380469 UNC13BO14795 1591 aa21.98■■□□□ 1.11
VPS16-203ENST00000380469 E9PCH4 1651 aa21.98■■□□□ 1.11
VPS16-203ENST00000380469 PLEKHH2Q8IVE3 1493 aa21.96■■□□□ 1.11
VPS16-203ENST00000380469 ERICH6Q7L0X2 663 aa21.96■■□□□ 1.11
VPS16-203ENST00000380469 TTC37Q6PGP7 1564 aa21.96■■□□□ 1.11
VPS16-203ENST00000380469 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.95■■□□□ 1.1
VPS16-203ENST00000380469 CHD1O14646 1710 aa21.94■■□□□ 1.1
VPS16-203ENST00000380469 CCDC136Q96JN2 1154 aa21.93■■□□□ 1.1
VPS16-203ENST00000380469 PLA2R1Q13018 1463 aa21.93■■□□□ 1.1
VPS16-203ENST00000380469 NBPF1Q3BBV0 1214 aa21.92■■□□□ 1.1
VPS16-203ENST00000380469 GPRASP1Q5JY77 1395 aa21.92■■□□□ 1.1
VPS16-203ENST00000380469 PLXNC1O60486 1568 aa21.92■■□□□ 1.1
VPS16-203ENST00000380469 SENP3-EIF4A1A0A087X0R7 540 aa21.92■■□□□ 1.1
VPS16-203ENST00000380469 NLRP13Q86W25 1043 aa21.92■■□□□ 1.1
VPS16-203ENST00000380469 MYO5CQ9NQX4 1742 aa21.91■■□□□ 1.1
VPS16-203ENST00000380469 SHROOM2Q13796 1616 aa21.91■■□□□ 1.1
VPS16-203ENST00000380469 IQGAP3Q86VI3 1631 aa21.91■■□□□ 1.1
VPS16-203ENST00000380469 A2MP01023 1474 aa21.9■■□□□ 1.1
VPS16-203ENST00000380469 PARD3Q8TEW0 1356 aa21.89■■□□□ 1.09
VPS16-203ENST00000380469 ABCC2Q92887 1545 aa21.89■■□□□ 1.09
VPS16-203ENST00000380469 DUOX2Q9NRD8 1548 aa21.89■■□□□ 1.09
VPS16-203ENST00000380469 LAMC1P11047 1609 aa21.89■■□□□ 1.09
VPS16-203ENST00000380469 WASHC2CQ9Y4E1 1318 aa21.87■■□□□ 1.09
VPS16-203ENST00000380469 EIF2AK4Q9P2K8 1649 aaKnown RBP21.86■■□□□ 1.09
VPS16-203ENST00000380469 PRDM15P57071 1507 aaPredicted RBP21.86■■□□□ 1.09
VPS16-203ENST00000380469 PER1O15534 1290 aaPredicted RBP21.85■■□□□ 1.09
VPS16-203ENST00000380469 ERBINQ96RT1 1412 aa21.85■■□□□ 1.09
VPS16-203ENST00000380469 ATP10AO60312 1499 aa21.85■■□□□ 1.09
VPS16-203ENST00000380469 COL17A1Q9UMD9 1497 aaPredicted RBP21.85■■□□□ 1.09
VPS16-203ENST00000380469 PDE3BQ13370 1112 aa21.83■■□□□ 1.09
VPS16-203ENST00000380469 TESK2Q96S53 571 aa21.83■■□□□ 1.09
VPS16-203ENST00000380469 EFCAB2Q5VUJ9 269 aa21.83■■□□□ 1.08
VPS16-203ENST00000380469 TMF1P82094 1093 aa21.82■■□□□ 1.08
VPS16-203ENST00000380469 PLCH2O75038 1416 aa21.81■■□□□ 1.08
VPS16-203ENST00000380469 MAGI2Q86UL8 1455 aa21.81■■□□□ 1.08
VPS16-203ENST00000380469 DISP3Q9P2K9 1392 aa21.81■■□□□ 1.08
VPS16-203ENST00000380469 RRP1P56182 461 aaKnown RBP21.79■■□□□ 1.08
VPS16-203ENST00000380469 PANK3Q9H999 370 aa21.79■■□□□ 1.08
VPS16-203ENST00000380469 ERCC6L2Q5T890 1561 aa21.79■■□□□ 1.08
VPS16-203ENST00000380469 RCAN3Q9UKA8 241 aa21.79■■□□□ 1.08
VPS16-203ENST00000380469 CC2D1BQ5T0F9 858 aaKnown RBP21.78■■□□□ 1.08
VPS16-203ENST00000380469 SALL2Q9Y467 1007 aaPredicted RBP21.78■■□□□ 1.08
VPS16-203ENST00000380469 INSRP06213 1382 aa21.75■■□□□ 1.07
VPS16-203ENST00000380469 ZCCHC11Q5TAX3 1644 aaKnown RBP21.73■■□□□ 1.07
VPS16-203ENST00000380469 ABCC1P33527 1531 aa21.72■■□□□ 1.07
VPS16-203ENST00000380469 ZMYM4Q5VZL5 1548 aa21.71■■□□□ 1.07
VPS16-203ENST00000380469 TRAPPC8Q9Y2L5 1435 aa21.71■■□□□ 1.07
VPS16-203ENST00000380469 UHRF1BP1LA0JNW5 1464 aa21.71■■□□□ 1.07
VPS16-203ENST00000380469 RNF17Q9BXT8 1623 aaKnown RBP21.7■■□□□ 1.06
VPS16-203ENST00000380469 EXOC6Q8TAG9 804 aa21.7■■□□□ 1.06
VPS16-203ENST00000380469 SPAG9O60271 1321 aaKnown RBP21.7■■□□□ 1.06
VPS16-203ENST00000380469 BLMP54132 1417 aaPredicted RBP21.69■■□□□ 1.06
VPS16-203ENST00000380469 STAC3Q96MF2 364 aa21.68■■□□□ 1.06
VPS16-203ENST00000380469 NOP58Q9Y2X3 529 aaKnown RBP21.68■■□□□ 1.06
VPS16-203ENST00000380469 ANP32AP39687 249 aaKnown RBP21.67■■□□□ 1.06
VPS16-203ENST00000380469 RTEL1-TNFRSF6BF6WH68 1400 aa21.67■■□□□ 1.06
VPS16-203ENST00000380469 CDCA7LQ96GN5 454 aa21.66■■□□□ 1.06
VPS16-203ENST00000380469 CDCA8Q53HL2 280 aa21.66■■□□□ 1.06
VPS16-203ENST00000380469 KNSTRNQ9Y448 316 aa21.65■■□□□ 1.06
VPS16-203ENST00000380469 MYT1LQ9UL68 1186 aa21.64■■□□□ 1.06
VPS16-203ENST00000380469 MADDQ8WXG6 1647 aa21.64■■□□□ 1.06
VPS16-203ENST00000380469 TRPM2O94759 1503 aa21.64■■□□□ 1.05
VPS16-203ENST00000380469 AFAP1Q8N556 730 aa21.62■■□□□ 1.05
VPS16-203ENST00000380469 ARAP3Q8WWN8 1544 aa21.61■■□□□ 1.05
VPS16-203ENST00000380469 WDR7Q9Y4E6 1490 aa21.61■■□□□ 1.05
VPS16-203ENST00000380469 IQGAP1P46940 1657 aa21.61■■□□□ 1.05
VPS16-203ENST00000380469 TCERG1O14776 1098 aaKnown RBP21.61■■□□□ 1.05
VPS16-203ENST00000380469 CLASP1Q7Z460 1538 aa21.6■■□□□ 1.05
VPS16-203ENST00000380469 PTPRTO14522 1441 aa21.6■■□□□ 1.05
VPS16-203ENST00000380469 IPO9Q96P70 1041 aaKnown RBP21.6■■□□□ 1.05
VPS16-203ENST00000380469 SCAPERQ9BY12 1400 aa21.6■■□□□ 1.05
VPS16-203ENST00000380469 SCAF11Q99590 1463 aaKnown RBP21.6■■□□□ 1.05
VPS16-203ENST00000380469 CEP152O94986 1710 aa21.6■■□□□ 1.05
VPS16-203ENST00000380469 ZFYVE16Q7Z3T8 1539 aa21.59■■□□□ 1.05
VPS16-203ENST00000380469 SPHKAPQ2M3C7 1700 aa21.59■■□□□ 1.05
VPS16-203ENST00000380469 KANK1Q14678 1352 aa21.59■■□□□ 1.05
VPS16-203ENST00000380469 ADAMTS8Q9UP79 889 aa21.58■■□□□ 1.05
VPS16-203ENST00000380469 PPP2R1AP30153 589 aa21.57■■□□□ 1.04
VPS16-203ENST00000380469 WDR43Q15061 677 aaKnown RBP eCLIP21.57■■□□□ 1.04
VPS16-203ENST00000380469 DEPDC5O75140 1603 aa21.56■■□□□ 1.04
VPS16-203ENST00000380469 CLTCL1P53675 1640 aa21.56■■□□□ 1.04
VPS16-203ENST00000380469 EIF3AQ14152 1382 aaKnown RBP21.56■■□□□ 1.04
VPS16-203ENST00000380469 TET3O43151 1660 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms