RNA–Protein interactions for RNA: ENST00000379540.7

NFX1-203, Transcript of nuclear transcription factor, X-box binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFX1, Length 4,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1-203ENST00000379540 PPP4R2Q9NY27 417 aa9.58□□□□□ -0.88
NFX1-203ENST00000379540 FGD1P98174 961 aa9.58□□□□□ -0.88
NFX1-203ENST00000379540 STAC3Q96MF2 364 aa9.58□□□□□ -0.88
NFX1-203ENST00000379540 GGT6Q6P531 493 aa9.57□□□□□ -0.88
NFX1-203ENST00000379540 ROCK2O75116 1388 aaKnown RBP9.57□□□□□ -0.88
NFX1-203ENST00000379540 KTN1Q86UP2 1357 aaKnown RBP9.57□□□□□ -0.88
NFX1-203ENST00000379540 L1TD1Q5T7N2 865 aaKnown RBP9.57□□□□□ -0.88
NFX1-203ENST00000379540 PTPRKQ15262 1439 aa9.57□□□□□ -0.88
NFX1-203ENST00000379540 LMOD3Q0VAK6 560 aa9.57□□□□□ -0.88
NFX1-203ENST00000379540 ROCK1Q13464 1354 aa9.56□□□□□ -0.88
NFX1-203ENST00000379540 KCNJ4P48050 445 aa9.56□□□□□ -0.88
NFX1-203ENST00000379540 SPAG9O60271 1321 aaKnown RBP9.56□□□□□ -0.88
NFX1-203ENST00000379540 LAS1LQ9Y4W2 734 aaKnown RBP9.56□□□□□ -0.88
NFX1-203ENST00000379540 PTMSP20962 102 aa9.55□□□□□ -0.88
NFX1-203ENST00000379540 PKD2Q13563 968 aa9.55□□□□□ -0.88
NFX1-203ENST00000379540 MIER1Q8N108 512 aa9.55□□□□□ -0.88
NFX1-203ENST00000379540 SIN3AQ96ST3 1273 aa9.55□□□□□ -0.88
NFX1-203ENST00000379540 ADCY10Q96PN6 1610 aa9.55□□□□□ -0.88
NFX1-203ENST00000379540 PLB1Q6P1J6 1458 aa9.54□□□□□ -0.88
NFX1-203ENST00000379540 DNMT1P26358 1616 aaKnown RBP9.54□□□□□ -0.88
NFX1-203ENST00000379540 NUP155O75694 1391 aa9.54□□□□□ -0.88
NFX1-203ENST00000379540 NBR1Q14596 966 aa9.54□□□□□ -0.88
NFX1-203ENST00000379540 DAPK1P53355 1430 aa9.54□□□□□ -0.88
NFX1-203ENST00000379540 MLECQ14165 292 aa9.54□□□□□ -0.88
NFX1-203ENST00000379540 KIF14Q15058 1648 aa9.53□□□□□ -0.88
NFX1-203ENST00000379540 ABCA8O94911 1581 aa9.53□□□□□ -0.88
NFX1-203ENST00000379540 HTATSF1O43719 755 aaKnown RBP9.52□□□□□ -0.88
NFX1-203ENST00000379540 CHMP4CQ96CF2 233 aa9.52□□□□□ -0.88
NFX1-203ENST00000379540 PLEKHG5O94827 1062 aa9.52□□□□□ -0.89
NFX1-203ENST00000379540 NEUROD2Q15784 382 aa9.52□□□□□ -0.89
NFX1-203ENST00000379540 CCDC34Q96HJ3 373 aa9.52□□□□□ -0.89
NFX1-203ENST00000379540 PTPRGP23470 1445 aa9.52□□□□□ -0.89
NFX1-203ENST00000379540 PRG4Q92954 1404 aaPredicted RBP9.52□□□□□ -0.89
NFX1-203ENST00000379540 PTMAP06454 111 aaKnown RBP9.52□□□□□ -0.89
NFX1-203ENST00000379540 GOLGA6L4A6NEF3 574 aa9.51□□□□□ -0.89
NFX1-203ENST00000379540 NGEFQ8N5V2 710 aa9.51□□□□□ -0.89
NFX1-203ENST00000379540 CSB-PGBD3P0DP91 1061 aa9.51□□□□□ -0.89
NFX1-203ENST00000379540 FRAT1Q92837 279 aaPredicted RBP9.51□□□□□ -0.89
NFX1-203ENST00000379540 STK31Q9BXU1 1019 aa9.51□□□□□ -0.89
NFX1-203ENST00000379540 CAMSAP2Q08AD1 1489 aa9.5□□□□□ -0.89
NFX1-203ENST00000379540 HMMRO75330 724 aa9.5□□□□□ -0.89
NFX1-203ENST00000379540 ABCC5O15440 1437 aa9.5□□□□□ -0.89
NFX1-203ENST00000379540 KIF3BO15066 747 aa9.5□□□□□ -0.89
NFX1-203ENST00000379540 PDE3BQ13370 1112 aa9.5□□□□□ -0.89
NFX1-203ENST00000379540 WASHC2CQ9Y4E1 1318 aa9.5□□□□□ -0.89
NFX1-203ENST00000379540 KIAA1211Q6ZU35 1233 aa9.49□□□□□ -0.89
NFX1-203ENST00000379540 CC2D1BQ5T0F9 858 aaKnown RBP9.49□□□□□ -0.89
NFX1-203ENST00000379540 MPHOSPH9Q99550 1183 aa9.49□□□□□ -0.89
NFX1-203ENST00000379540 HIRIP3Q9BW71 556 aaPredicted RBP9.49□□□□□ -0.89
NFX1-203ENST00000379540 GPATCH8Q9UKJ3 1502 aaKnown RBP9.49□□□□□ -0.89
NFX1-203ENST00000379540 ADGBQ8N7X0 1667 aa9.49□□□□□ -0.89
NFX1-203ENST00000379540 CHD1O14646 1710 aa9.49□□□□□ -0.89
NFX1-203ENST00000379540 HSP90AB1P08238 724 aaKnown RBP9.49□□□□□ -0.89
NFX1-203ENST00000379540 GPATCH3Q96I76 525 aa9.49□□□□□ -0.89
NFX1-203ENST00000379540 VGFO15240 615 aaPredicted RBP9.49□□□□□ -0.89
NFX1-203ENST00000379540 HSCBQ8IWL3 235 aa9.48□□□□□ -0.89
NFX1-203ENST00000379540 ANO8Q9HCE9 1232 aaPredicted RBP9.48□□□□□ -0.89
NFX1-203ENST00000379540 RWDD1Q9H446 243 aaPredicted RBP9.48□□□□□ -0.89
NFX1-203ENST00000379540 OSCARQ8IYS5 282 aa9.47□□□□□ -0.89
NFX1-203ENST00000379540 ATP10BO94823 1461 aa9.47□□□□□ -0.89
NFX1-203ENST00000379540 TNNT2P45379 298 aaPredicted RBP9.47□□□□□ -0.89
NFX1-203ENST00000379540 ADGRL2O95490 1459 aa9.46□□□□□ -0.89
NFX1-203ENST00000379540 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.46□□□□□ -0.89
NFX1-203ENST00000379540 SHANK2Q9UPX8 1470 aa9.46□□□□□ -0.9
NFX1-203ENST00000379540 PMFBP1Q8TBY8 1022 aa9.46□□□□□ -0.9
NFX1-203ENST00000379540 NGDNQ8NEJ9 315 aaKnown RBP9.45□□□□□ -0.9
NFX1-203ENST00000379540 U2AF1L5P0DN76 240 aaPredicted RBP9.45□□□□□ -0.9
NFX1-203ENST00000379540 U2AF1Q01081 240 aaKnown RBP eCLIP9.45□□□□□ -0.9
NFX1-203ENST00000379540 SHROOM2Q13796 1616 aa9.45□□□□□ -0.9
NFX1-203ENST00000379540 CHAF1AQ13111 956 aaPredicted RBP9.45□□□□□ -0.9
NFX1-203ENST00000379540 CROCC2H7BZ55 1655 aa9.45□□□□□ -0.9
NFX1-203ENST00000379540 ZNF644Q9H582 1327 aaPredicted RBP9.45□□□□□ -0.9
NFX1-203ENST00000379540 KIF3AQ9Y496 699 aa9.44□□□□□ -0.9
NFX1-203ENST00000379540 SUPT16HQ9Y5B9 1047 aaKnown RBP9.44□□□□□ -0.9
NFX1-203ENST00000379540 PAK3O75914 559 aaPredicted RBP9.44□□□□□ -0.9
NFX1-203ENST00000379540 HSPA5P11021 654 aaKnown RBP9.44□□□□□ -0.9
NFX1-203ENST00000379540 ABCC10Q5T3U5 1492 aa9.44□□□□□ -0.9
NFX1-203ENST00000379540 NLRP13Q86W25 1043 aa9.44□□□□□ -0.9
NFX1-203ENST00000379540 STK26Q9P289 416 aa9.44□□□□□ -0.9
NFX1-203ENST00000379540 NCOA1Q15788 1441 aa9.43□□□□□ -0.9
NFX1-203ENST00000379540 AEBP2Q6ZN18 517 aaPredicted RBP9.43□□□□□ -0.9
NFX1-203ENST00000379540 SENP3Q9H4L4 574 aaPredicted RBP9.43□□□□□ -0.9
NFX1-203ENST00000379540 CDC42BPAQ5VT25 1732 aa9.43□□□□□ -0.9
NFX1-203ENST00000379540 WWC1Q8IX03 1113 aa9.43□□□□□ -0.9
NFX1-203ENST00000379540 LRRFIP1Q32MZ4 808 aaKnown RBP9.43□□□□□ -0.9
NFX1-203ENST00000379540 CCDC144AA2RUR9 1427 aa9.42□□□□□ -0.9
NFX1-203ENST00000379540 KDM6BO15054 1643 aa9.42□□□□□ -0.9
NFX1-203ENST00000379540 CSPP1Q1MSJ5 1256 aa9.42□□□□□ -0.9
NFX1-203ENST00000379540 C9orf84Q5VXU9 1444 aa9.41□□□□□ -0.9
NFX1-203ENST00000379540 HMGB2P26583 209 aaKnown RBP9.41□□□□□ -0.9
NFX1-203ENST00000379540 RGS3P49796 1198 aa9.41□□□□□ -0.9
NFX1-203ENST00000379540 GNL2Q13823 731 aaKnown RBP9.41□□□□□ -0.9
NFX1-203ENST00000379540 ARHGEF5Q12774 1597 aa9.41□□□□□ -0.9
NFX1-203ENST00000379540 ABCC2Q92887 1545 aa9.41□□□□□ -0.9
NFX1-203ENST00000379540 AMPHP49418 695 aa9.41□□□□□ -0.9
NFX1-203ENST00000379540 PLEKHH2Q8IVE3 1493 aa9.41□□□□□ -0.9
NFX1-203ENST00000379540 IRX6P78412 446 aaPredicted RBP9.41□□□□□ -0.9
NFX1-203ENST00000379540 GORABQ5T7V8 394 aa9.41□□□□□ -0.9
NFX1-203ENST00000379540 ANKRD50Q9ULJ7 1429 aa9.41□□□□□ -0.9
NFX1-203ENST00000379540 TAF7LQ5H9L4 462 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms