RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, humanhuman

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-204ENST00000377499 TRHP20396 242 aaPredicted RBP16.36■□□□□ 0.21
LMO7-204ENST00000377499 DUOX2Q9NRD8 1548 aa16.35■□□□□ 0.21
LMO7-204ENST00000377499 PLEKHG5O94827 1062 aa16.35■□□□□ 0.21
LMO7-204ENST00000377499 CHGAP10645 457 aaKnown RBP16.34■□□□□ 0.21
LMO7-204ENST00000377499 ARAP3Q8WWN8 1544 aa16.33■□□□□ 0.21
LMO7-204ENST00000377499 MIER1Q8N108 512 aa16.33■□□□□ 0.21
LMO7-204ENST00000377499 EIF4G2P78344 907 aaKnown RBP eCLIP16.33■□□□□ 0.2
LMO7-204ENST00000377499 ZNF518AQ6AHZ1 1483 aa16.32■□□□□ 0.2
LMO7-204ENST00000377499 CCDC144AA2RUR9 1427 aa16.32■□□□□ 0.2
LMO7-204ENST00000377499 RTEL1-TNFRSF6BF6WH68 1400 aa16.32■□□□□ 0.2
LMO7-204ENST00000377499 RPRD2Q5VT52 1461 aaKnown RBP16.31■□□□□ 0.2
LMO7-204ENST00000377499 ATP7AQ04656 1500 aa16.31■□□□□ 0.2
LMO7-204ENST00000377499 ERBINQ96RT1 1412 aa16.31■□□□□ 0.2
LMO7-204ENST00000377499 FAM135AQ9P2D6 1515 aa16.31■□□□□ 0.2
LMO7-204ENST00000377499 NBPF8Q3BBV2 869 aa16.3■□□□□ 0.2
LMO7-204ENST00000377499 MAST1Q9Y2H9 1570 aa16.29■□□□□ 0.2
LMO7-204ENST00000377499 DHX29Q7Z478 1369 aaKnown RBP16.29■□□□□ 0.2
LMO7-204ENST00000377499 HSPA5P11021 654 aaKnown RBP16.29■□□□□ 0.2
LMO7-204ENST00000377499 MLECQ14165 292 aa16.29■□□□□ 0.2
LMO7-204ENST00000377499 TSHZ2Q9NRE2 1034 aa16.29■□□□□ 0.2
LMO7-204ENST00000377499 SALL2Q9Y467 1007 aaPredicted RBP16.29■□□□□ 0.2
LMO7-204ENST00000377499 WASHC2CQ9Y4E1 1318 aa16.29■□□□□ 0.2
LMO7-204ENST00000377499 ZFYVE16Q7Z3T8 1539 aa16.27■□□□□ 0.2
LMO7-204ENST00000377499 POGZQ7Z3K3 1410 aa16.26■□□□□ 0.19
LMO7-204ENST00000377499 TSPOAP1O95153 1857 aa16.26■□□□□ 0.19
LMO7-204ENST00000377499 PLXNC1O60486 1568 aa16.26■□□□□ 0.19
LMO7-204ENST00000377499 CNGB1Q14028 1251 aaPredicted RBP16.26■□□□□ 0.19
LMO7-204ENST00000377499 CARD11Q9BXL7 1154 aa16.25■□□□□ 0.19
LMO7-204ENST00000377499 NEO1Q92859 1461 aa16.24■□□□□ 0.19
LMO7-204ENST00000377499 A2MP01023 1474 aa16.24■□□□□ 0.19
LMO7-204ENST00000377499 ARID4BQ4LE39 1312 aaPredicted RBP16.23■□□□□ 0.19
LMO7-204ENST00000377499 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.23■□□□□ 0.19
LMO7-204ENST00000377499 CFAP74Q9C0B2 1584 aa16.23■□□□□ 0.19
LMO7-204ENST00000377499 SENP3Q9H4L4 574 aaPredicted RBP16.22■□□□□ 0.19
LMO7-204ENST00000377499 ESF1Q9H501 851 aaKnown RBP16.21■□□□□ 0.19
LMO7-204ENST00000377499 PLPPR3Q6T4P5 718 aa16.19■□□□□ 0.18
LMO7-204ENST00000377499 KDM5DQ9BY66 1539 aa16.18■□□□□ 0.18
LMO7-204ENST00000377499 TEX14Q8IWB6 1497 aa16.17■□□□□ 0.18
LMO7-204ENST00000377499 YEATS2Q9ULM3 1422 aa16.16■□□□□ 0.18
LMO7-204ENST00000377499 INO80Q9ULG1 1556 aaPredicted RBP16.16■□□□□ 0.18
LMO7-204ENST00000377499 ANP32CO43423 234 aa16.16■□□□□ 0.18
LMO7-204ENST00000377499 MLH3Q9UHC1 1453 aa16.16■□□□□ 0.18
LMO7-204ENST00000377499 UNC13BO14795 1591 aa16.15■□□□□ 0.18
LMO7-204ENST00000377499 ROCK2O75116 1388 aaKnown RBP16.15■□□□□ 0.18
LMO7-204ENST00000377499 DIP2BQ9P265 1576 aa16.15■□□□□ 0.18
LMO7-204ENST00000377499 KIDINS220Q9ULH0 1771 aa16.14■□□□□ 0.17
LMO7-204ENST00000377499 STAG3Q9UJ98 1225 aa16.14■□□□□ 0.17
LMO7-204ENST00000377499 HECW2Q9P2P5 1572 aa16.14■□□□□ 0.17
LMO7-204ENST00000377499 BCANQ96GW7 911 aa16.12■□□□□ 0.17
LMO7-204ENST00000377499 IQGAP3Q86VI3 1631 aa16.12■□□□□ 0.17
LMO7-204ENST00000377499 PLA2R1Q13018 1463 aa16.12■□□□□ 0.17
LMO7-204ENST00000377499 NBPF1Q3BBV0 1214 aa16.11■□□□□ 0.17
LMO7-204ENST00000377499 NUTM2DQ5VT03 806 aaPredicted RBP16.11■□□□□ 0.17
LMO7-204ENST00000377499 USP47Q96K76 1375 aa16.11■□□□□ 0.17
LMO7-204ENST00000377499 MAP3K4Q9Y6R4 1608 aa16.11■□□□□ 0.17
LMO7-204ENST00000377499 GLI2P10070 1586 aa16.11■□□□□ 0.17
LMO7-204ENST00000377499 ST20-MTHFSA0A0A6YYL1 179 aa16.1■□□□□ 0.17
LMO7-204ENST00000377499 CFAP65Q6ZU64 1925 aaKnown RBP16.09■□□□□ 0.17
LMO7-204ENST00000377499 UBE2Q2Q8WVN8 375 aa16.09■□□□□ 0.17
LMO7-204ENST00000377499 KDM5CP41229 1560 aa16.08■□□□□ 0.17
LMO7-204ENST00000377499 WASHC2AQ641Q2 1341 aa16.08■□□□□ 0.17
LMO7-204ENST00000377499 RTN4Q9NQC3 1192 aaKnown RBP16.08■□□□□ 0.16
LMO7-204ENST00000377499 MAGI2Q86UL8 1455 aa16.07■□□□□ 0.16
LMO7-204ENST00000377499 SUPT16HQ9Y5B9 1047 aaKnown RBP16.07■□□□□ 0.16
LMO7-204ENST00000377499 C11orf95C9JLR9 678 aaPredicted RBP16.06■□□□□ 0.16
LMO7-204ENST00000377499 ABCA6Q8N139 1617 aa16.06■□□□□ 0.16
LMO7-204ENST00000377499 ATP10AO60312 1499 aa16.05■□□□□ 0.16
LMO7-204ENST00000377499 FBXO31Q5XUX0 539 aaPredicted RBP16.04■□□□□ 0.16
LMO7-204ENST00000377499 E9PCH4 1651 aa16.03■□□□□ 0.16
LMO7-204ENST00000377499 DIP2CQ9Y2E4 1556 aa16.02■□□□□ 0.15
LMO7-204ENST00000377499 KIF7Q2M1P5 1343 aa16.01■□□□□ 0.15
LMO7-204ENST00000377499 UGGT1Q9NYU2 1555 aa16.01■□□□□ 0.15
LMO7-204ENST00000377499 EIF2AK4Q9P2K8 1649 aaKnown RBP16.01■□□□□ 0.15
LMO7-204ENST00000377499 PODXL2Q9NZ53 605 aa16.01■□□□□ 0.15
LMO7-204ENST00000377499 NPATQ14207 1427 aa16.01■□□□□ 0.15
LMO7-204ENST00000377499 PRDM15P57071 1507 aaPredicted RBP16.01■□□□□ 0.15
LMO7-204ENST00000377499 TET3O43151 1660 aa16.01■□□□□ 0.15
LMO7-204ENST00000377499 CFAP70Q5T0N1 1121 aa16■□□□□ 0.15
LMO7-204ENST00000377499 CCDC7Q96M83 1385 aa16■□□□□ 0.15
LMO7-204ENST00000377499 FRMPD1Q5SYB0 1578 aa16■□□□□ 0.15
LMO7-204ENST00000377499 RICTORQ6R327 1708 aa16■□□□□ 0.15
LMO7-204ENST00000377499 COL17A1Q9UMD9 1497 aaPredicted RBP16■□□□□ 0.15
LMO7-204ENST00000377499 PRAG1Q86YV5 1406 aa16■□□□□ 0.15
LMO7-204ENST00000377499 PKNOX2Q96KN3 472 aa16■□□□□ 0.15
LMO7-204ENST00000377499 IDI1Q13907 227 aa15.99■□□□□ 0.15
LMO7-204ENST00000377499 CEP152O94986 1710 aa15.98■□□□□ 0.15
LMO7-204ENST00000377499 UHRF1BP1Q6BDS2 1440 aa15.98■□□□□ 0.15
LMO7-204ENST00000377499 ADGRF5Q8IZF2 1346 aa15.98■□□□□ 0.15
LMO7-204ENST00000377499 DEKP35659 375 aaKnown RBP15.98■□□□□ 0.15
LMO7-204ENST00000377499 PTPRTO14522 1441 aa15.98■□□□□ 0.15
LMO7-204ENST00000377499 RALGAPBQ86X10 1494 aa15.98■□□□□ 0.15
LMO7-204ENST00000377499 DEPDC5O75140 1603 aa15.97■□□□□ 0.15
LMO7-204ENST00000377499 TRPM2O94759 1503 aa15.97■□□□□ 0.15
LMO7-204ENST00000377499 EFCAB6Q5THR3 1501 aa15.97■□□□□ 0.15
LMO7-204ENST00000377499 DNAJC5Q9H3Z4 198 aa15.96■□□□□ 0.15
LMO7-204ENST00000377499 MROH1Q8NDA8 1641 aa15.96■□□□□ 0.15
LMO7-204ENST00000377499 SPATA31E1Q6ZUB1 1445 aa15.95■□□□□ 0.14
LMO7-204ENST00000377499 ABCC3O15438 1527 aa15.95■□□□□ 0.14
LMO7-204ENST00000377499 SPHKAPQ2M3C7 1700 aa15.95■□□□□ 0.14
LMO7-204ENST00000377499 STAC3Q96MF2 364 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms