RNA–Protein interactions for RNA: ENST00000377067.8

GPC5-201, Transcript of glypican 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC5, Length 2,957 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC5-201ENST00000377067 PARD3Q8TEW0 1356 aa24.83■■□□□ 1.56
GPC5-201ENST00000377067 SLKQ9H2G2 1235 aaPredicted RBP24.82■■□□□ 1.56
GPC5-201ENST00000377067 KIAA1107Q9UPP5 1409 aa24.82■■□□□ 1.56
GPC5-201ENST00000377067 TOPBP1Q92547 1522 aa24.81■■□□□ 1.56
GPC5-201ENST00000377067 RALGAPBQ86X10 1494 aa24.8■■□□□ 1.56
GPC5-201ENST00000377067 NAP1L5Q96NT1 182 aaPredicted RBP24.8■■□□□ 1.56
GPC5-201ENST00000377067 DNMBPQ6XZF7 1577 aa24.8■■□□□ 1.56
GPC5-201ENST00000377067 GLIPR1L2Q4G1C9 344 aa24.79■■□□□ 1.56
GPC5-201ENST00000377067 NESP48681 1621 aa24.77■■□□□ 1.56
GPC5-201ENST00000377067 ZMYND15Q9H091 742 aa24.76■■□□□ 1.55
GPC5-201ENST00000377067 DNMT1P26358 1616 aaKnown RBP24.75■■□□□ 1.55
GPC5-201ENST00000377067 L1TD1Q5T7N2 865 aaKnown RBP24.74■■□□□ 1.55
GPC5-201ENST00000377067 USP19O94966 1318 aa24.74■■□□□ 1.55
GPC5-201ENST00000377067 BLMP54132 1417 aaPredicted RBP24.73■■□□□ 1.55
GPC5-201ENST00000377067 UHRF1BP1Q6BDS2 1440 aa24.73■■□□□ 1.55
GPC5-201ENST00000377067 PER1O15534 1290 aaPredicted RBP24.73■■□□□ 1.55
GPC5-201ENST00000377067 SEC24BO95487 1268 aa24.72■■□□□ 1.55
GPC5-201ENST00000377067 E9PCH4 1651 aa24.71■■□□□ 1.55
GPC5-201ENST00000377067 PNNQ9H307 717 aaKnown RBP24.7■■□□□ 1.54
GPC5-201ENST00000377067 DUSP27Q5VZP5 1158 aa24.69■■□□□ 1.54
GPC5-201ENST00000377067 ADAMTS8Q9UP79 889 aa24.69■■□□□ 1.54
GPC5-201ENST00000377067 PANK2Q9BZ23 570 aa24.67■■□□□ 1.54
GPC5-201ENST00000377067 XRCC6P12956 609 aaKnown RBP eCLIP24.67■■□□□ 1.54
GPC5-201ENST00000377067 HSP90AA2PQ14568 343 aaPredicted RBP24.67■■□□□ 1.54
GPC5-201ENST00000377067 ZMYM4Q5VZL5 1548 aa24.66■■□□□ 1.54
GPC5-201ENST00000377067 ZNF777Q9ULD5 760 aaPredicted RBP24.66■■□□□ 1.54
GPC5-201ENST00000377067 PLEKHH1Q9ULM0 1364 aa24.65■■□□□ 1.54
GPC5-201ENST00000377067 GZF1Q9H116 711 aaPredicted RBP24.65■■□□□ 1.54
GPC5-201ENST00000377067 KIF21AQ7Z4S6 1674 aa24.64■■□□□ 1.54
GPC5-201ENST00000377067 BECN1Q14457 450 aa24.64■■□□□ 1.54
GPC5-201ENST00000377067 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.64■■□□□ 1.53
GPC5-201ENST00000377067 HSP90AA1P07900 732 aaKnown RBP24.63■■□□□ 1.53
GPC5-201ENST00000377067 GAPVD1Q14C86 1478 aa24.62■■□□□ 1.53
GPC5-201ENST00000377067 IGHDP01880 384 aa24.62■■□□□ 1.53
GPC5-201ENST00000377067 PANK3Q9H999 370 aa24.62■■□□□ 1.53
GPC5-201ENST00000377067 KIAA0586Q9BVV6 1533 aa24.62■■□□□ 1.53
GPC5-201ENST00000377067 GOLGA6L3A6NEY3 463 aa24.61■■□□□ 1.53
GPC5-201ENST00000377067 PLEKHH2Q8IVE3 1493 aa24.6■■□□□ 1.53
GPC5-201ENST00000377067 SPRYD3Q8NCJ5 442 aa24.59■■□□□ 1.53
GPC5-201ENST00000377067 NUP155O75694 1391 aa24.59■■□□□ 1.53
GPC5-201ENST00000377067 CLCN1P35523 988 aa24.59■■□□□ 1.53
GPC5-201ENST00000377067 ANTXR1Q9H6X2 564 aa24.59■■□□□ 1.53
GPC5-201ENST00000377067 LAMC3Q9Y6N6 1575 aa24.58■■□□□ 1.53
GPC5-201ENST00000377067 WDR62O43379 1518 aa24.58■■□□□ 1.53
GPC5-201ENST00000377067 GOLGA2Q08379 1002 aa24.58■■□□□ 1.53
GPC5-201ENST00000377067 NBPF1Q3BBV0 1214 aa24.58■■□□□ 1.53
GPC5-201ENST00000377067 ZNF608Q9ULD9 1512 aaPredicted RBP24.58■■□□□ 1.53
GPC5-201ENST00000377067 CFDP1Q9UEE9 299 aaPredicted RBP24.58■■□□□ 1.53
GPC5-201ENST00000377067 BCAR3O75815 825 aa24.56■■□□□ 1.52
GPC5-201ENST00000377067 RRP9O43818 475 aaKnown RBP24.55■■□□□ 1.52
GPC5-201ENST00000377067 INSRP06213 1382 aa24.55■■□□□ 1.52
GPC5-201ENST00000377067 ARHGEF12Q9NZN5 1544 aa24.54■■□□□ 1.52
GPC5-201ENST00000377067 WDR43Q15061 677 aaKnown RBP eCLIP24.54■■□□□ 1.52
GPC5-201ENST00000377067 DISP3Q9P2K9 1392 aa24.54■■□□□ 1.52
GPC5-201ENST00000377067 FSD2A1L4K1 749 aa24.53■■□□□ 1.52
GPC5-201ENST00000377067 CAMSAP2Q08AD1 1489 aa24.52■■□□□ 1.52
GPC5-201ENST00000377067 ANKRD50Q9ULJ7 1429 aa24.52■■□□□ 1.52
GPC5-201ENST00000377067 SPINK5Q9NQ38 1064 aaPredicted RBP24.51■■□□□ 1.51
GPC5-201ENST00000377067 RGL3Q3MIN7 710 aa24.51■■□□□ 1.51
GPC5-201ENST00000377067 TBC1D2Q9BYX2 928 aa24.51■■□□□ 1.51
GPC5-201ENST00000377067 ZNF521Q96K83 1311 aa24.5■■□□□ 1.51
GPC5-201ENST00000377067 SLFN5Q08AF3 891 aa24.5■■□□□ 1.51
GPC5-201ENST00000377067 CCDC146Q8IYE0 955 aa24.49■■□□□ 1.51
GPC5-201ENST00000377067 EIF3AQ14152 1382 aaKnown RBP24.49■■□□□ 1.51
GPC5-201ENST00000377067 ANKRD30AQ9BXX3 1397 aa24.49■■□□□ 1.51
GPC5-201ENST00000377067 MCM4P33991 863 aa24.48■■□□□ 1.51
GPC5-201ENST00000377067 NLRP1Q9C000 1473 aa24.47■■□□□ 1.51
GPC5-201ENST00000377067 URB2Q14146 1524 aaKnown RBP24.47■■□□□ 1.51
GPC5-201ENST00000377067 TESK2Q96S53 571 aa24.45■■□□□ 1.51
GPC5-201ENST00000377067 COL17A1Q9UMD9 1497 aaPredicted RBP24.44■■□□□ 1.5
GPC5-201ENST00000377067 MAPK8IP3Q9UPT6 1336 aa24.44■■□□□ 1.5
GPC5-201ENST00000377067 PPP2R1AP30153 589 aa24.44■■□□□ 1.5
GPC5-201ENST00000377067 IQGAP2Q13576 1575 aa24.43■■□□□ 1.5
GPC5-201ENST00000377067 PRG4Q92954 1404 aaPredicted RBP24.43■■□□□ 1.5
GPC5-201ENST00000377067 COG6Q9Y2V7 657 aa24.43■■□□□ 1.5
GPC5-201ENST00000377067 ERBB4Q15303 1308 aa24.42■■□□□ 1.5
GPC5-201ENST00000377067 VIRMAQ69YN4 1812 aaKnown RBP24.42■■□□□ 1.5
GPC5-201ENST00000377067 PANK1Q8TE04 598 aa24.42■■□□□ 1.5
GPC5-201ENST00000377067 UPF2Q9HAU5 1272 aaKnown RBP24.42■■□□□ 1.5
GPC5-201ENST00000377067 TRAK2O60296 914 aa24.42■■□□□ 1.5
GPC5-201ENST00000377067 ADGBQ8N7X0 1667 aa24.41■■□□□ 1.5
GPC5-201ENST00000377067 TBC1D32Q96NH3 1257 aa24.41■■□□□ 1.5
GPC5-201ENST00000377067 ADGRL2O95490 1459 aa24.41■■□□□ 1.5
GPC5-201ENST00000377067 PRAG1Q86YV5 1406 aa24.4■■□□□ 1.5
GPC5-201ENST00000377067 CLUAP1Q96AJ1 413 aa24.39■■□□□ 1.5
GPC5-201ENST00000377067 ESPNB1AK53 854 aa24.39■■□□□ 1.49
GPC5-201ENST00000377067 NUP153P49790 1475 aaKnown RBP24.39■■□□□ 1.49
GPC5-201ENST00000377067 APAF1O14727 1248 aa24.39■■□□□ 1.49
GPC5-201ENST00000377067 MYH16Q9H6N6 1097 aa24.38■■□□□ 1.49
GPC5-201ENST00000377067 CANXP27824 592 aaKnown RBP24.38■■□□□ 1.49
GPC5-201ENST00000377067 MRE11P49959 708 aa24.38■■□□□ 1.49
GPC5-201ENST00000377067 DMRT2Q9Y5R5 561 aa24.37■■□□□ 1.49
GPC5-201ENST00000377067 ERBINQ96RT1 1412 aa24.37■■□□□ 1.49
GPC5-201ENST00000377067 TMF1P82094 1093 aa24.37■■□□□ 1.49
GPC5-201ENST00000377067 TRMT2AQ8IZ69 625 aaKnown RBP24.37■■□□□ 1.49
GPC5-201ENST00000377067 CEP170Q5SW79 1584 aa24.36■■□□□ 1.49
GPC5-201ENST00000377067 GRPEL1Q9HAV7 217 aa24.36■■□□□ 1.49
GPC5-201ENST00000377067 NKTRP30414 1462 aaKnown RBP24.35■■□□□ 1.49
GPC5-201ENST00000377067 CGNL1Q0VF96 1302 aa24.35■■□□□ 1.49
GPC5-201ENST00000377067 KDM5DQ9BY66 1539 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms