RNA–Protein interactions for RNA: ENST00000377036.2

DFFA-201, Transcript of DNA fragmentation factor subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene DFFA, Length 1,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-201ENST00000377036 KANK1Q14678 1352 aa25.62■■□□□ 1.69
DFFA-201ENST00000377036 RNF17Q9BXT8 1623 aaKnown RBP25.58■■□□□ 1.69
DFFA-201ENST00000377036 GGT6Q6P531 493 aa25.58■■□□□ 1.69
DFFA-201ENST00000377036 FAM135AQ9P2D6 1515 aa25.58■■□□□ 1.68
DFFA-201ENST00000377036 TRIM52Q96A61 297 aa25.56■■□□□ 1.68
DFFA-201ENST00000377036 NUP155O75694 1391 aa25.55■■□□□ 1.68
DFFA-201ENST00000377036 DEPDC5O75140 1603 aa25.55■■□□□ 1.68
DFFA-201ENST00000377036 UNC13BO14795 1591 aa25.55■■□□□ 1.68
DFFA-201ENST00000377036 PRDM15P57071 1507 aaPredicted RBP25.55■■□□□ 1.68
DFFA-201ENST00000377036 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.54■■□□□ 1.68
DFFA-201ENST00000377036 ESF1Q9H501 851 aaKnown RBP25.54■■□□□ 1.68
DFFA-201ENST00000377036 WASHC2CQ9Y4E1 1318 aa25.51■■□□□ 1.67
DFFA-201ENST00000377036 KDM5DQ9BY66 1539 aa25.51■■□□□ 1.67
DFFA-201ENST00000377036 CNTLNQ9NXG0 1405 aa25.5■■□□□ 1.67
DFFA-201ENST00000377036 MLECQ14165 292 aa25.49■■□□□ 1.67
DFFA-201ENST00000377036 SIGLEC1Q9BZZ2 1709 aa25.47■■□□□ 1.67
DFFA-201ENST00000377036 VWDEQ8N2E2 1590 aa25.47■■□□□ 1.67
DFFA-201ENST00000377036 MROH1Q8NDA8 1641 aa25.47■■□□□ 1.67
DFFA-201ENST00000377036 LMTK2Q8IWU2 1503 aa25.46■■□□□ 1.67
DFFA-201ENST00000377036 SLC4A1APQ9BWU0 796 aaKnown RBP25.46■■□□□ 1.67
DFFA-201ENST00000377036 IQGAP3Q86VI3 1631 aa25.44■■□□□ 1.66
DFFA-201ENST00000377036 ZC3H13Q5T200 1668 aaKnown RBP25.43■■□□□ 1.66
DFFA-201ENST00000377036 MPHOSPH9Q99550 1183 aa25.43■■□□□ 1.66
DFFA-201ENST00000377036 ABCC3O15438 1527 aa25.43■■□□□ 1.66
DFFA-201ENST00000377036 PZPP20742 1482 aa25.4■■□□□ 1.66
DFFA-201ENST00000377036 ARHGAP31Q2M1Z3 1444 aa25.38■■□□□ 1.65
DFFA-201ENST00000377036 RPRD2Q5VT52 1461 aaKnown RBP25.38■■□□□ 1.65
DFFA-201ENST00000377036 TET3O43151 1660 aa25.36■■□□□ 1.65
DFFA-201ENST00000377036 PKD2Q13563 968 aa25.35■■□□□ 1.65
DFFA-201ENST00000377036 EFCAB6Q5THR3 1501 aa25.34■■□□□ 1.65
DFFA-201ENST00000377036 ADAMTSL3P82987 1691 aa25.34■■□□□ 1.65
DFFA-201ENST00000377036 ZMYM3Q14202 1370 aa25.34■■□□□ 1.65
DFFA-201ENST00000377036 DHX57Q6P158 1386 aaKnown RBP25.31■■□□□ 1.64
DFFA-201ENST00000377036 MROH2AA6NES4 1674 aa25.31■■□□□ 1.64
DFFA-201ENST00000377036 CAMSAP1Q5T5Y3 1602 aa25.29■■□□□ 1.64
DFFA-201ENST00000377036 FER1L4A9Z1Z3 1794 aa25.29■■□□□ 1.64
DFFA-201ENST00000377036 NPATQ14207 1427 aa25.29■■□□□ 1.64
DFFA-201ENST00000377036 CLTCQ00610 1675 aaKnown RBP25.29■■□□□ 1.64
DFFA-201ENST00000377036 MADDQ8WXG6 1647 aa25.28■■□□□ 1.64
DFFA-201ENST00000377036 CEP152O94986 1710 aa25.28■■□□□ 1.64
DFFA-201ENST00000377036 CLSPNQ9HAW4 1339 aa25.26■■□□□ 1.63
DFFA-201ENST00000377036 PTPRTO14522 1441 aa25.22■■□□□ 1.63
DFFA-201ENST00000377036 CCER1Q8TC90 406 aaPredicted RBP25.21■■□□□ 1.63
DFFA-201ENST00000377036 E9PCH4 1651 aa25.21■■□□□ 1.63
DFFA-201ENST00000377036 NOS1P29475 1434 aa25.2■■□□□ 1.62
DFFA-201ENST00000377036 PTPRMP28827 1452 aa25.2■■□□□ 1.62
DFFA-201ENST00000377036 ERVK-7P63135 1459 aa25.2■■□□□ 1.62
DFFA-201ENST00000377036 KDM4FA0A1W2PPD8 638 aa25.2■■□□□ 1.62
DFFA-201ENST00000377036 RIMS1Q86UR5 1692 aaKnown RBP25.19■■□□□ 1.62
DFFA-201ENST00000377036 ANKRD30BQ9BXX2 1392 aa25.19■■□□□ 1.62
DFFA-201ENST00000377036 SLC52A1Q9NWF4 448 aa25.19■■□□□ 1.62
DFFA-201ENST00000377036 FOXD1Q16676 465 aa25.18■■□□□ 1.62
DFFA-201ENST00000377036 SPATA31D1Q6ZQQ2 1576 aa25.17■■□□□ 1.62
DFFA-201ENST00000377036 CEBPAP49715 358 aaPredicted RBP25.15■■□□□ 1.62
DFFA-201ENST00000377036 FBXO31Q5XUX0 539 aaPredicted RBP25.15■■□□□ 1.62
DFFA-201ENST00000377036 TRPM2O94759 1503 aa25.15■■□□□ 1.62
DFFA-201ENST00000377036 TNRQ92752 1358 aa25.15■■□□□ 1.62
DFFA-201ENST00000377036 CCDC144AA2RUR9 1427 aa25.15■■□□□ 1.62
DFFA-201ENST00000377036 C3P01024 1663 aa25.14■■□□□ 1.61
DFFA-201ENST00000377036 PLA2R1Q13018 1463 aa25.12■■□□□ 1.61
DFFA-201ENST00000377036 PREX1Q8TCU6 1659 aa25.11■■□□□ 1.61
DFFA-201ENST00000377036 SPHKAPQ2M3C7 1700 aa25.1■■□□□ 1.61
DFFA-201ENST00000377036 NLRP1Q9C000 1473 aa25.09■■□□□ 1.61
DFFA-201ENST00000377036 PLPPR3Q6T4P5 718 aa25.08■■□□□ 1.61
DFFA-201ENST00000377036 SYNMO15061 1565 aa25.05■■□□□ 1.6
DFFA-201ENST00000377036 IDI1Q13907 227 aa25.04■■□□□ 1.6
DFFA-201ENST00000377036 STAG3Q9UJ98 1225 aa25.01■■□□□ 1.59
DFFA-201ENST00000377036 PIK3C2BO00750 1634 aa25.01■■□□□ 1.59
DFFA-201ENST00000377036 SETD1BQ9UPS6 1966 aaKnown RBP24.99■■□□□ 1.59
DFFA-201ENST00000377036 UHRF1BP1Q6BDS2 1440 aa24.99■■□□□ 1.59
DFFA-201ENST00000377036 NEURL4Q96JN8 1562 aa24.98■■□□□ 1.59
DFFA-201ENST00000377036 TIMELESSQ9UNS1 1208 aa24.98■■□□□ 1.59
DFFA-201ENST00000377036 CLTCL1P53675 1640 aa24.98■■□□□ 1.59
DFFA-201ENST00000377036 A2ML1A8K2U0 1454 aa24.97■■□□□ 1.59
DFFA-201ENST00000377036 CFAP65Q6ZU64 1925 aaKnown RBP24.96■■□□□ 1.59
DFFA-201ENST00000377036 NEUROD1Q13562 356 aa24.95■■□□□ 1.59
DFFA-201ENST00000377036 SIN3AQ96ST3 1273 aa24.95■■□□□ 1.59
DFFA-201ENST00000377036 UGGT1Q9NYU2 1555 aa24.95■■□□□ 1.59
DFFA-201ENST00000377036 CHGAP10645 457 aaKnown RBP24.95■■□□□ 1.58
DFFA-201ENST00000377036 THEMISQ8N1K5 641 aaPredicted RBP24.95■■□□□ 1.58
DFFA-201ENST00000377036 SPATA31E1Q6ZUB1 1445 aa24.94■■□□□ 1.58
DFFA-201ENST00000377036 STAC3Q96MF2 364 aa24.94■■□□□ 1.58
DFFA-201ENST00000377036 MYO3AQ8NEV4 1616 aa24.94■■□□□ 1.58
DFFA-201ENST00000377036 KDM5AP29375 1690 aaKnown RBP24.93■■□□□ 1.58
DFFA-201ENST00000377036 RPGRIP1LQ68CZ1 1315 aa24.93■■□□□ 1.58
DFFA-201ENST00000377036 ADGRB3O60242 1522 aa24.93■■□□□ 1.58
DFFA-201ENST00000377036 HDGFP51858 240 aaKnown RBP24.92■■□□□ 1.58
DFFA-201ENST00000377036 CEP170BQ9Y4F5 1589 aaPredicted RBP24.91■■□□□ 1.58
DFFA-201ENST00000377036 TONSLQ96HA7 1378 aa24.91■■□□□ 1.58
DFFA-201ENST00000377036 ZNF326Q5BKZ1 582 aaKnown RBP24.89■■□□□ 1.58
DFFA-201ENST00000377036 TMEM131LA2VDJ0 1609 aa24.88■■□□□ 1.57
DFFA-201ENST00000377036 ZNF142P52746 1687 aaPredicted RBP24.87■■□□□ 1.57
DFFA-201ENST00000377036 KIF1BO60333 1816 aa24.87■■□□□ 1.57
DFFA-201ENST00000377036 RGL3Q3MIN7 710 aa24.86■■□□□ 1.57
DFFA-201ENST00000377036 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.86■■□□□ 1.57
DFFA-201ENST00000377036 TMEM2Q9UHN6 1383 aa24.84■■□□□ 1.57
DFFA-201ENST00000377036 VGFO15240 615 aaPredicted RBP24.82■■□□□ 1.56
DFFA-201ENST00000377036 ZEB1P37275 1124 aaPredicted RBP24.82■■□□□ 1.56
DFFA-201ENST00000377036 EID1Q9Y6B2 187 aa24.82■■□□□ 1.56
DFFA-201ENST00000377036 UBR1Q8IWV7 1749 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms