RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 KIF15Q9NS87 1388 aa12.13□□□□□ -0.47
SPEN-201ENST00000375759 FOXD4L1Q9NU39 408 aa12.13□□□□□ -0.47
SPEN-201ENST00000375759 TPM2P07951 284 aa12.12□□□□□ -0.47
SPEN-201ENST00000375759 FANCIQ9NVI1 1328 aa12.12□□□□□ -0.47
SPEN-201ENST00000375759 SAFB2Q14151 953 aaKnown RBP eCLIP12.12□□□□□ -0.478e-7■□□□□ 9.1
SPEN-201ENST00000375759 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.12□□□□□ -0.47
SPEN-201ENST00000375759 TAF7LQ5H9L4 462 aa12.11□□□□□ -0.47
SPEN-201ENST00000375759 CCAR2Q8N163 923 aaKnown RBP12.11□□□□□ -0.47
SPEN-201ENST00000375759 PRM3Q9NNZ6 103 aa12.11□□□□□ -0.47
SPEN-201ENST00000375759 CHMP3Q9Y3E7 222 aa12.11□□□□□ -0.47
SPEN-201ENST00000375759 FMN1Q68DA7 1419 aa12.11□□□□□ -0.47
SPEN-201ENST00000375759 NOL8Q76FK4 1167 aaKnown RBP12.11□□□□□ -0.47
SPEN-201ENST00000375759 PDE4AP27815 886 aa12.1□□□□□ -0.47
SPEN-201ENST00000375759 CALRP27797 417 aaKnown RBP12.1□□□□□ -0.47
SPEN-201ENST00000375759 TERF2IPQ9NYB0 399 aa12.1□□□□□ -0.47
SPEN-201ENST00000375759 CARMIL1Q5VZK9 1371 aa12.1□□□□□ -0.47
SPEN-201ENST00000375759 MPHOSPH9Q99550 1183 aa12.1□□□□□ -0.47
SPEN-201ENST00000375759 TMX4Q9H1E5 349 aaPredicted RBP12.1□□□□□ -0.47
SPEN-201ENST00000375759 PES1O00541 588 aaKnown RBP12.09□□□□□ -0.47
SPEN-201ENST00000375759 FAM184AQ8NB25 1140 aa12.09□□□□□ -0.47
SPEN-201ENST00000375759 NOM1Q5C9Z4 860 aaKnown RBP12.08□□□□□ -0.48
SPEN-201ENST00000375759 STK26Q9P289 416 aa12.08□□□□□ -0.48
SPEN-201ENST00000375759 ZBED9Q6R2W3 1325 aa12.08□□□□□ -0.48
SPEN-201ENST00000375759 SLC4A10Q6U841 1118 aa12.08□□□□□ -0.48
SPEN-201ENST00000375759 ANKRD30AQ9BXX3 1397 aa12.08□□□□□ -0.48
SPEN-201ENST00000375759 IPO7O95373 1038 aaKnown RBP12.08□□□□□ -0.48
SPEN-201ENST00000375759 MTERF4Q7Z6M4 381 aaKnown RBP12.08□□□□□ -0.48
SPEN-201ENST00000375759 CLUAP1Q96AJ1 413 aa12.08□□□□□ -0.48
SPEN-201ENST00000375759 MYBBP1AQ9BQG0 1328 aaKnown RBP12.07□□□□□ -0.48
SPEN-201ENST00000375759 CUX2O14529 1486 aa12.07□□□□□ -0.48
SPEN-201ENST00000375759 FOXD4L5Q5VV16 416 aaPredicted RBP12.07□□□□□ -0.48
SPEN-201ENST00000375759 FOXD4L4Q8WXT5 416 aaPredicted RBP12.07□□□□□ -0.48
SPEN-201ENST00000375759 NUP155O75694 1391 aa12.07□□□□□ -0.48
SPEN-201ENST00000375759 ERCC6Q03468 1493 aa12.07□□□□□ -0.48
SPEN-201ENST00000375759 PDE4CQ08493 712 aa12.07□□□□□ -0.48
SPEN-201ENST00000375759 REC8O95072 547 aa12.06□□□□□ -0.48
SPEN-201ENST00000375759 FOXD1Q16676 465 aa12.06□□□□□ -0.48
SPEN-201ENST00000375759 HOOK1Q9UJC3 728 aaKnown RBP12.06□□□□□ -0.48
SPEN-201ENST00000375759 ZNF592Q92610 1267 aa12.06□□□□□ -0.48
SPEN-201ENST00000375759 CGNL1Q0VF96 1302 aa12.06□□□□□ -0.48
SPEN-201ENST00000375759 ANKRD20A12PQ8NF67 263 aa12.06□□□□□ -0.48
SPEN-201ENST00000375759 PAK3O75914 559 aaPredicted RBP12.05□□□□□ -0.48
SPEN-201ENST00000375759 LRRFIP1Q32MZ4 808 aaKnown RBP12.05□□□□□ -0.48
SPEN-201ENST00000375759 FAM43AQ8N2R8 423 aa12.05□□□□□ -0.48
SPEN-201ENST00000375759 FAM13BQ9NYF5 915 aa12.05□□□□□ -0.48
SPEN-201ENST00000375759 CCDC146Q8IYE0 955 aa12.05□□□□□ -0.48
SPEN-201ENST00000375759 ZNF330Q9Y3S2 320 aaPredicted RBP12.05□□□□□ -0.48
SPEN-201ENST00000375759 MARCH6O60337 910 aa12.04□□□□□ -0.48
SPEN-201ENST00000375759 ARGLU1Q9NWB6 273 aaPredicted RBP12.04□□□□□ -0.48
SPEN-201ENST00000375759 RRP1P56182 461 aaKnown RBP12.04□□□□□ -0.48
SPEN-201ENST00000375759 AKAP17AQ02040 695 aaKnown RBP12.04□□□□□ -0.48
SPEN-201ENST00000375759 MAP7D2Q96T17 732 aa12.04□□□□□ -0.48
SPEN-201ENST00000375759 E9PSI1 815 aa12.04□□□□□ -0.48
SPEN-201ENST00000375759 ANKRD45Q5TZF3 282 aa12.04□□□□□ -0.48
SPEN-201ENST00000375759 ACBD3Q9H3P7 528 aa12.03□□□□□ -0.48
SPEN-201ENST00000375759 RILPL2Q969X0 211 aa12.03□□□□□ -0.48
SPEN-201ENST00000375759 HOMER1Q86YM7 354 aa12.03□□□□□ -0.48
SPEN-201ENST00000375759 RUFY2Q8WXA3 655 aa12.03□□□□□ -0.48
SPEN-201ENST00000375759 AK7Q96M32 723 aa12.03□□□□□ -0.48
SPEN-201ENST00000375759 SOGA1O94964 1423 aa12.02□□□□□ -0.48
SPEN-201ENST00000375759 RRP12Q5JTH9 1297 aaKnown RBP12.02□□□□□ -0.48
SPEN-201ENST00000375759 CSB-PGBD3P0DP91 1061 aa12.02□□□□□ -0.49
SPEN-201ENST00000375759 ZKSCAN2Q63HK3 967 aa12.02□□□□□ -0.49
SPEN-201ENST00000375759 CPLX2Q6PUV4 134 aaKnown RBP12.02□□□□□ -0.49
SPEN-201ENST00000375759 CHMP5Q9NZZ3 219 aa12.02□□□□□ -0.49
SPEN-201ENST00000375759 TOMM22Q9NS69 142 aa12.02□□□□□ -0.49
SPEN-201ENST00000375759 CDR1P51861 262 aa12.01□□□□□ -0.49
SPEN-201ENST00000375759 CARMIL2Q6F5E8 1435 aa12.01□□□□□ -0.49
SPEN-201ENST00000375759 RUFY1Q96T51 708 aa12.01□□□□□ -0.49
SPEN-201ENST00000375759 ZKSCAN1P17029 563 aaPredicted RBP12.01□□□□□ -0.49
SPEN-201ENST00000375759 MCTP1Q6DN14 999 aa12.01□□□□□ -0.49
SPEN-201ENST00000375759 NUCB2P80303 420 aa12□□□□□ -0.49
SPEN-201ENST00000375759 ROCK1Q13464 1354 aa12□□□□□ -0.49
SPEN-201ENST00000375759 VPS53Q5VIR6 699 aa12□□□□□ -0.49
SPEN-201ENST00000375759 DIAPH3Q9NSV4 1193 aa12□□□□□ -0.49
SPEN-201ENST00000375759 SYNE3Q6ZMZ3 975 aa12□□□□□ -0.49
SPEN-201ENST00000375759 ABCC8Q09428 1581 aa12□□□□□ -0.49
SPEN-201ENST00000375759 CWC15Q9P013 229 aaKnown RBP12□□□□□ -0.49
SPEN-201ENST00000375759 PATL2C9JE40 543 aaKnown RBP11.99□□□□□ -0.49
SPEN-201ENST00000375759 TRIM29Q14134 588 aa11.99□□□□□ -0.49
SPEN-201ENST00000375759 HSP90B2PQ58FF3 399 aa11.99□□□□□ -0.49
SPEN-201ENST00000375759 CCDC18Q5T9S5 1454 aa11.99□□□□□ -0.49
SPEN-201ENST00000375759 FOXD4L6Q3SYB3 417 aaPredicted RBP11.99□□□□□ -0.49
SPEN-201ENST00000375759 FOXD4L3Q6VB84 417 aaPredicted RBP11.99□□□□□ -0.49
SPEN-201ENST00000375759 CCDC47Q96A33 483 aaKnown RBP11.99□□□□□ -0.49
SPEN-201ENST00000375759 SLC4A3P48751 1232 aa11.99□□□□□ -0.49
SPEN-201ENST00000375759 NGEFQ8N5V2 710 aa11.99□□□□□ -0.49
SPEN-201ENST00000375759 DDX19BQ9UMR2 479 aa11.98□□□□□ -0.49
SPEN-201ENST00000375759 GGT6Q6P531 493 aa11.98□□□□□ -0.49
SPEN-201ENST00000375759 L3MBTL2Q969R5 705 aa11.98□□□□□ -0.49
SPEN-201ENST00000375759 SASS6Q6UVJ0 657 aa11.98□□□□□ -0.49
SPEN-201ENST00000375759 PCMTD1Q96MG8 357 aaPredicted RBP11.98□□□□□ -0.49
SPEN-201ENST00000375759 FRAT2O75474 233 aaPredicted RBP11.97□□□□□ -0.49
SPEN-201ENST00000375759 UACAQ9BZF9 1416 aa11.97□□□□□ -0.49
SPEN-201ENST00000375759 CRBNQ96SW2 442 aa11.97□□□□□ -0.49
SPEN-201ENST00000375759 RNF20Q5VTR2 975 aa11.97□□□□□ -0.49
SPEN-201ENST00000375759 KANK4Q5T7N3 995 aaPredicted RBP11.97□□□□□ -0.49
SPEN-201ENST00000375759 CCDC39Q9UFE4 941 aa11.96□□□□□ -0.49
SPEN-201ENST00000375759 G3V3G9 751 aa11.96□□□□□ -0.49
SPEN-201ENST00000375759 DCAF8Q5TAQ9 597 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms