RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 BCL2L13Q9BXK5 485 aa18.45■□□□□ 0.54
NOTCH4-201ENST00000375023 TRIM34Q9BYJ4 488 aa18.45■□□□□ 0.54
NOTCH4-201ENST00000375023 CCDC180Q9P1Z9 1646 aa18.45■□□□□ 0.54
NOTCH4-201ENST00000375023 KIF3BO15066 747 aa18.44■□□□□ 0.54
NOTCH4-201ENST00000375023 AMPHP49418 695 aa18.44■□□□□ 0.54
NOTCH4-201ENST00000375023 CARMIL1Q5VZK9 1371 aa18.43■□□□□ 0.54
NOTCH4-201ENST00000375023 RWDD1Q9H446 243 aaPredicted RBP18.43■□□□□ 0.54
NOTCH4-201ENST00000375023 SPAG9O60271 1321 aaKnown RBP18.43■□□□□ 0.54
NOTCH4-201ENST00000375023 NECTIN2Q92692 538 aa18.43■□□□□ 0.54
NOTCH4-201ENST00000375023 USP35Q9P2H5 1018 aa18.42■□□□□ 0.54
NOTCH4-201ENST00000375023 TRAK1Q9UPV9 953 aa18.42■□□□□ 0.54
NOTCH4-201ENST00000375023 NUP155O75694 1391 aa18.42■□□□□ 0.54
NOTCH4-201ENST00000375023 PES1O00541 588 aaKnown RBP18.41■□□□□ 0.54
NOTCH4-201ENST00000375023 A0A0U1RQG5 324 aaPredicted RBP18.41■□□□□ 0.54
NOTCH4-201ENST00000375023 GBP4Q96PP9 640 aa18.41■□□□□ 0.54
NOTCH4-201ENST00000375023 MARCH6O60337 910 aa18.41■□□□□ 0.54
NOTCH4-201ENST00000375023 MPHOSPH9Q99550 1183 aa18.41■□□□□ 0.54
NOTCH4-201ENST00000375023 SLC4A3P48751 1232 aa18.4■□□□□ 0.54
NOTCH4-201ENST00000375023 PAXIP1Q6ZW49 1069 aaPredicted RBP18.4■□□□□ 0.54
NOTCH4-201ENST00000375023 SETD5Q9C0A6 1442 aa18.39■□□□□ 0.53
NOTCH4-201ENST00000375023 RILPL2Q969X0 211 aa18.39■□□□□ 0.53
NOTCH4-201ENST00000375023 IBSPP21815 317 aaPredicted RBP18.38■□□□□ 0.53
NOTCH4-201ENST00000375023 PLIN1O60240 522 aa18.38■□□□□ 0.53
NOTCH4-201ENST00000375023 ARHGAP35Q9NRY4 1499 aa18.38■□□□□ 0.53
NOTCH4-201ENST00000375023 GPATCH3Q96I76 525 aa18.38■□□□□ 0.53
NOTCH4-201ENST00000375023 TCEAL9Q9UHQ7 104 aa18.38■□□□□ 0.53
NOTCH4-201ENST00000375023 TCERG1O14776 1098 aaKnown RBP18.35■□□□□ 0.53
NOTCH4-201ENST00000375023 WDR70Q9NW82 654 aa18.35■□□□□ 0.53
NOTCH4-201ENST00000375023 ABCC8Q09428 1581 aa18.33■□□□□ 0.52
NOTCH4-201ENST00000375023 CALD1Q05682 793 aaKnown RBP18.33■□□□□ 0.52
NOTCH4-201ENST00000375023 FHAD1B1AJZ9 1412 aa18.33■□□□□ 0.52
NOTCH4-201ENST00000375023 WASHC2CQ9Y4E1 1318 aa18.32■□□□□ 0.52
NOTCH4-201ENST00000375023 FAM177BA6PVY3 158 aa18.31■□□□□ 0.52
NOTCH4-201ENST00000375023 EIF2S2P20042 333 aaKnown RBP18.31■□□□□ 0.52
NOTCH4-201ENST00000375023 TPM4P67936 248 aa18.31■□□□□ 0.52
NOTCH4-201ENST00000375023 PMFBP1Q8TBY8 1022 aa18.31■□□□□ 0.52
NOTCH4-201ENST00000375023 RAB3GAP2Q9H2M9 1393 aa18.3■□□□□ 0.52
NOTCH4-201ENST00000375023 SF3A1Q15459 793 aaKnown RBP18.29■□□□□ 0.52
NOTCH4-201ENST00000375023 CCAR1Q8IX12 1150 aaKnown RBP18.29■□□□□ 0.52
NOTCH4-201ENST00000375023 BCL11BQ9C0K0 894 aaPredicted RBP18.29■□□□□ 0.52
NOTCH4-201ENST00000375023 CENPJQ9HC77 1338 aaPredicted RBP18.29■□□□□ 0.52
NOTCH4-201ENST00000375023 CCER2I3L3R5 266 aa18.29■□□□□ 0.52
NOTCH4-201ENST00000375023 GOLGA6L3A6NEY3 463 aa18.29■□□□□ 0.52
NOTCH4-201ENST00000375023 FOSBP53539 338 aa18.29■□□□□ 0.52
NOTCH4-201ENST00000375023 TDRD9Q8NDG6 1382 aaKnown RBP18.29■□□□□ 0.52
NOTCH4-201ENST00000375023 HTATSF1O43719 755 aaKnown RBP18.28■□□□□ 0.52
NOTCH4-201ENST00000375023 TERF2IPQ9NYB0 399 aa18.28■□□□□ 0.52
NOTCH4-201ENST00000375023 ANKRD45Q5TZF3 282 aa18.27■□□□□ 0.52
NOTCH4-201ENST00000375023 CCAR2Q8N163 923 aaKnown RBP18.27■□□□□ 0.51
NOTCH4-201ENST00000375023 HMMRO75330 724 aa18.26■□□□□ 0.51
NOTCH4-201ENST00000375023 L3MBTL2Q969R5 705 aa18.26■□□□□ 0.51
NOTCH4-201ENST00000375023 SYAP1Q96A49 352 aaPredicted RBP18.26■□□□□ 0.51
NOTCH4-201ENST00000375023 H3BQV1 296 aa18.26■□□□□ 0.51
NOTCH4-201ENST00000375023 RALBP1Q15311 655 aa18.26■□□□□ 0.51
NOTCH4-201ENST00000375023 IFFO2Q5TF58 517 aa18.26■□□□□ 0.51
NOTCH4-201ENST00000375023 KIF16BQ96L93 1317 aa18.25■□□□□ 0.51
NOTCH4-201ENST00000375023 MCTP1Q6DN14 999 aa18.25■□□□□ 0.51
NOTCH4-201ENST00000375023 KDM4AO75164 1064 aa18.24■□□□□ 0.51
NOTCH4-201ENST00000375023 NUTM2GQ5VZR2 741 aa18.24■□□□□ 0.51
NOTCH4-201ENST00000375023 MTMR7Q9Y216 660 aa18.24■□□□□ 0.51
NOTCH4-201ENST00000375023 TPD52L1Q16890 204 aaPredicted RBP18.24■□□□□ 0.51
NOTCH4-201ENST00000375023 PATL2C9JE40 543 aaKnown RBP18.24■□□□□ 0.51
NOTCH4-201ENST00000375023 EFCAB2Q5VUJ9 269 aa18.23■□□□□ 0.51
NOTCH4-201ENST00000375023 CECR2Q9BXF3 1484 aa18.22■□□□□ 0.51
NOTCH4-201ENST00000375023 FYB1O15117 783 aa18.22■□□□□ 0.51
NOTCH4-201ENST00000375023 PANK3Q9H999 370 aa18.22■□□□□ 0.51
NOTCH4-201ENST00000375023 DHX16O60231 1041 aaKnown RBP18.22■□□□□ 0.51
NOTCH4-201ENST00000375023 GRM1Q13255 1194 aa18.22■□□□□ 0.51
NOTCH4-201ENST00000375023 MINK1Q8N4C8 1332 aaPredicted RBP18.22■□□□□ 0.51
NOTCH4-201ENST00000375023 ZNF428Q96B54 188 aa18.22■□□□□ 0.51
NOTCH4-201ENST00000375023 VPS37DQ86XT2 251 aa18.21■□□□□ 0.51
NOTCH4-201ENST00000375023 CEP89Q96ST8 783 aa18.21■□□□□ 0.51
NOTCH4-201ENST00000375023 C1orf141Q5JVX7 400 aa18.21■□□□□ 0.51
NOTCH4-201ENST00000375023 TNNT3P45378 269 aaPredicted RBP18.2■□□□□ 0.5
NOTCH4-201ENST00000375023 EIF3AQ14152 1382 aaKnown RBP18.2■□□□□ 0.5
NOTCH4-201ENST00000375023 MYCNP04198 464 aaPredicted RBP18.2■□□□□ 0.5
NOTCH4-201ENST00000375023 FAM184AQ8NB25 1140 aa18.2■□□□□ 0.5
NOTCH4-201ENST00000375023 PSME1Q06323 249 aa18.2■□□□□ 0.5
NOTCH4-201ENST00000375023 ATF3P18847 181 aa18.19■□□□□ 0.5
NOTCH4-201ENST00000375023 APPP05067 770 aa18.19■□□□□ 0.5
NOTCH4-201ENST00000375023 VSIG10Q8N0Z9 540 aa18.19■□□□□ 0.5
NOTCH4-201ENST00000375023 GOLGA6L1Q8N7Z2 621 aa18.18■□□□□ 0.5
NOTCH4-201ENST00000375023 STRN4Q9NRL3 753 aa18.18■□□□□ 0.5
NOTCH4-201ENST00000375023 ANKRD30AQ9BXX3 1397 aa18.18■□□□□ 0.5
NOTCH4-201ENST00000375023 ST18O60284 1047 aa18.17■□□□□ 0.5
NOTCH4-201ENST00000375023 FAM69CQ0P6D2 419 aa18.17■□□□□ 0.5
NOTCH4-201ENST00000375023 CARMIL2Q6F5E8 1435 aa18.17■□□□□ 0.5
NOTCH4-201ENST00000375023 TSHZ2Q9NRE2 1034 aa18.17■□□□□ 0.5
NOTCH4-201ENST00000375023 ST20-MTHFSA0A0A6YYL1 179 aa18.16■□□□□ 0.5
NOTCH4-201ENST00000375023 ZNF592Q92610 1267 aa18.16■□□□□ 0.5
NOTCH4-201ENST00000375023 IPO9Q96P70 1041 aaKnown RBP18.16■□□□□ 0.5
NOTCH4-201ENST00000375023 NOL10Q9BSC4 688 aaKnown RBP18.16■□□□□ 0.5
NOTCH4-201ENST00000375023 COG6Q9Y2V7 657 aa18.16■□□□□ 0.5
NOTCH4-201ENST00000375023 TPM3P06753 285 aa18.16■□□□□ 0.5
NOTCH4-201ENST00000375023 RBM33Q96EV2 1170 aaKnown RBP18.15■□□□□ 0.5
NOTCH4-201ENST00000375023 CRBNQ96SW2 442 aa18.15■□□□□ 0.5
NOTCH4-201ENST00000375023 AKAP17AQ02040 695 aaKnown RBP18.14■□□□□ 0.5
NOTCH4-201ENST00000375023 EXOC6Q8TAG9 804 aa18.14■□□□□ 0.49
NOTCH4-201ENST00000375023 PCMTD1Q96MG8 357 aaPredicted RBP18.14■□□□□ 0.49
NOTCH4-201ENST00000375023 FHOD3Q2V2M9 1422 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 153.2 ms