RNA–Protein interactions for RNA: ENST00000373063.7

FOXP4-204, Transcript of forkhead box P4, humanhuman

TSL 1 (best) BASIC

Gene FOXP4, Length 5,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP4-204ENST00000373063 TRIM6-TRIM34B2RNG4 842 aa28.3■■■□□ 2.12
FOXP4-204ENST00000373063 RCAN3Q9UKA8 241 aa28.3■■■□□ 2.12
FOXP4-204ENST00000373063 HSP90B1P14625 803 aaKnown RBP28.28■■■□□ 2.12
FOXP4-204ENST00000373063 DRC7Q8IY82 874 aa28.26■■■□□ 2.11
FOXP4-204ENST00000373063 MINK1Q8N4C8 1332 aaPredicted RBP28.26■■■□□ 2.11
FOXP4-204ENST00000373063 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.25■■■□□ 2.11
FOXP4-204ENST00000373063 EVC2Q86UK5 1308 aa28.25■■■□□ 2.11
FOXP4-204ENST00000373063 PSME1Q06323 249 aa28.23■■■□□ 2.11
FOXP4-204ENST00000373063 TOMM22Q9NS69 142 aa28.23■■■□□ 2.11
FOXP4-204ENST00000373063 SMARCA4P51532 1647 aa28.23■■■□□ 2.11
FOXP4-204ENST00000373063 NOP58Q9Y2X3 529 aaKnown RBP28.22■■■□□ 2.11
FOXP4-204ENST00000373063 PMFBP1Q8TBY8 1022 aa28.22■■■□□ 2.11
FOXP4-204ENST00000373063 TTC5Q8N0Z6 440 aa28.2■■■□□ 2.11
FOXP4-204ENST00000373063 SYTL4Q96C24 671 aaPredicted RBP28.2■■■□□ 2.1
FOXP4-204ENST00000373063 CLUAP1Q96AJ1 413 aa28.19■■■□□ 2.1
FOXP4-204ENST00000373063 TEFQ10587 303 aa28.17■■■□□ 2.1
FOXP4-204ENST00000373063 HTATSF1O43719 755 aaKnown RBP28.16■■■□□ 2.1
FOXP4-204ENST00000373063 ATF3P18847 181 aa28.16■■■□□ 2.1
FOXP4-204ENST00000373063 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.16■■■□□ 2.1
FOXP4-204ENST00000373063 CENPJQ9HC77 1338 aaPredicted RBP28.16■■■□□ 2.1
FOXP4-204ENST00000373063 RRP7AQ9Y3A4 280 aaKnown RBP28.16■■■□□ 2.1
FOXP4-204ENST00000373063 PHF23Q9BUL5 403 aaPredicted RBP28.16■■■□□ 2.1
FOXP4-204ENST00000373063 CGNL1Q0VF96 1302 aa28.16■■■□□ 2.1
FOXP4-204ENST00000373063 GAPVD1Q14C86 1478 aa28.15■■■□□ 2.1
FOXP4-204ENST00000373063 KIAA2012Q0VF49 1180 aa28.14■■■□□ 2.1
FOXP4-204ENST00000373063 NGEFQ8N5V2 710 aa28.14■■■□□ 2.1
FOXP4-204ENST00000373063 VPS53Q5VIR6 699 aa28.14■■■□□ 2.1
FOXP4-204ENST00000373063 NLRP13Q86W25 1043 aa28.14■■■□□ 2.09
FOXP4-204ENST00000373063 RASSF8Q8NHQ8 419 aa28.13■■■□□ 2.09
FOXP4-204ENST00000373063 PANK3Q9H999 370 aa28.13■■■□□ 2.09
FOXP4-204ENST00000373063 CHAF1AQ13111 956 aaPredicted RBP28.1■■■□□ 2.09
FOXP4-204ENST00000373063 KLHL34Q8N239 644 aa28.1■■■□□ 2.09
FOXP4-204ENST00000373063 ST20-MTHFSA0A0A6YYL1 179 aa28.1■■■□□ 2.09
FOXP4-204ENST00000373063 MFAP1P55081 439 aaKnown RBP28.08■■■□□ 2.09
FOXP4-204ENST00000373063 L1TD1Q5T7N2 865 aaKnown RBP28.08■■■□□ 2.09
FOXP4-204ENST00000373063 KIF15Q9NS87 1388 aa28.08■■■□□ 2.08
FOXP4-204ENST00000373063 ELL2O00472 640 aaPredicted RBP28.07■■■□□ 2.08
FOXP4-204ENST00000373063 ERICH6BQ5W0A0 696 aa28.07■■■□□ 2.08
FOXP4-204ENST00000373063 MARCH6O60337 910 aa28.07■■■□□ 2.08
FOXP4-204ENST00000373063 PHLDB1Q86UU1 1377 aa28.06■■■□□ 2.08
FOXP4-204ENST00000373063 AMER1Q5JTC6 1135 aaPredicted RBP28.05■■■□□ 2.08
FOXP4-204ENST00000373063 EIF2S2P20042 333 aaKnown RBP28.05■■■□□ 2.08
FOXP4-204ENST00000373063 NAP1L5Q96NT1 182 aaPredicted RBP28.05■■■□□ 2.08
FOXP4-204ENST00000373063 FGD5Q6ZNL6 1462 aa28.04■■■□□ 2.08
FOXP4-204ENST00000373063 PRDM2Q13029 1718 aa28.03■■■□□ 2.08
FOXP4-204ENST00000373063 NOL8Q76FK4 1167 aaKnown RBP28.03■■■□□ 2.08
FOXP4-204ENST00000373063 TRIM34Q9BYJ4 488 aa28.03■■■□□ 2.08
FOXP4-204ENST00000373063 NEXNQ0ZGT2 675 aa28.03■■■□□ 2.08
FOXP4-204ENST00000373063 CCDC34Q96HJ3 373 aa28.03■■■□□ 2.08
FOXP4-204ENST00000373063 NOL10Q9BSC4 688 aaKnown RBP28.02■■■□□ 2.08
FOXP4-204ENST00000373063 RAD54L2Q9Y4B4 1467 aa28.02■■■□□ 2.08
FOXP4-204ENST00000373063 GBP4Q96PP9 640 aa28.02■■■□□ 2.08
FOXP4-204ENST00000373063 FBXW7Q969H0 707 aa28.01■■■□□ 2.07
FOXP4-204ENST00000373063 MYBBP1AQ9BQG0 1328 aaKnown RBP27.99■■■□□ 2.07
FOXP4-204ENST00000373063 TPM4P67936 248 aa27.97■■■□□ 2.07
FOXP4-204ENST00000373063 RAD21O60216 631 aa27.96■■■□□ 2.07
FOXP4-204ENST00000373063 AMOTL1Q8IY63 956 aa27.96■■■□□ 2.07
FOXP4-204ENST00000373063 CTDP1Q9Y5B0 961 aaPredicted RBP27.96■■■□□ 2.07
FOXP4-204ENST00000373063 AQRO60306 1485 aaKnown RBP eCLIP27.95■■■□□ 2.075e-7■■■■■ 36.1
FOXP4-204ENST00000373063 MSNP26038 577 aaKnown RBP27.95■■■□□ 2.07
FOXP4-204ENST00000373063 PTMSP20962 102 aa27.94■■■□□ 2.06
FOXP4-204ENST00000373063 NECTIN2Q92692 538 aa27.94■■■□□ 2.06
FOXP4-204ENST00000373063 C9orf78Q9NZ63 289 aaPredicted RBP27.94■■■□□ 2.06
FOXP4-204ENST00000373063 DIAPH1O60610 1272 aaKnown RBP27.93■■■□□ 2.06
FOXP4-204ENST00000373063 PRM3Q9NNZ6 103 aa27.93■■■□□ 2.06
FOXP4-204ENST00000373063 PDE3BQ13370 1112 aa27.93■■■□□ 2.06
FOXP4-204ENST00000373063 RILPL2Q969X0 211 aa27.93■■■□□ 2.06
FOXP4-204ENST00000373063 VPS37DQ86XT2 251 aa27.92■■■□□ 2.06
FOXP4-204ENST00000373063 RAPGEF4Q8WZA2 1011 aa27.92■■■□□ 2.06
FOXP4-204ENST00000373063 CREBRFQ8IUR6 639 aa27.91■■■□□ 2.06
FOXP4-204ENST00000373063 KIF16BQ96L93 1317 aa27.9■■■□□ 2.06
FOXP4-204ENST00000373063 SYAP1Q96A49 352 aaPredicted RBP27.9■■■□□ 2.06
FOXP4-204ENST00000373063 SLKQ9H2G2 1235 aaPredicted RBP27.9■■■□□ 2.06
FOXP4-204ENST00000373063 DHX57Q6P158 1386 aaKnown RBP27.9■■■□□ 2.06
FOXP4-204ENST00000373063 BCL2L13Q9BXK5 485 aa27.9■■■□□ 2.06
FOXP4-204ENST00000373063 NUTM2GQ5VZR2 741 aa27.89■■■□□ 2.05
FOXP4-204ENST00000373063 DDX58O95786 925 aaKnown RBP27.88■■■□□ 2.05
FOXP4-204ENST00000373063 NOC3LQ8WTT2 800 aaKnown RBP27.88■■■□□ 2.05
FOXP4-204ENST00000373063 MYOM3Q5VTT5 1437 aa27.87■■■□□ 2.05
FOXP4-204ENST00000373063 NLRP2Q9NX02 1062 aa27.87■■■□□ 2.05
FOXP4-204ENST00000373063 TCERG1O14776 1098 aaKnown RBP27.87■■■□□ 2.05
FOXP4-204ENST00000373063 CSPP1Q1MSJ5 1256 aa27.87■■■□□ 2.05
FOXP4-204ENST00000373063 KIF3AQ9Y496 699 aa27.87■■■□□ 2.05
FOXP4-204ENST00000373063 AKAP17AQ02040 695 aaKnown RBP27.87■■■□□ 2.05
FOXP4-204ENST00000373063 RUSC2Q8N2Y8 1516 aa27.87■■■□□ 2.05
FOXP4-204ENST00000373063 USP47Q96K76 1375 aa27.87■■■□□ 2.05
FOXP4-204ENST00000373063 DCAF8L1A6NGE4 600 aa27.86■■■□□ 2.05
FOXP4-204ENST00000373063 FOXD4L1Q9NU39 408 aa27.85■■■□□ 2.05
FOXP4-204ENST00000373063 LRRFIP1Q32MZ4 808 aaKnown RBP27.85■■■□□ 2.05
FOXP4-204ENST00000373063 PDE4CQ08493 712 aa27.85■■■□□ 2.05
FOXP4-204ENST00000373063 TCEAL9Q9UHQ7 104 aa27.84■■■□□ 2.05
FOXP4-204ENST00000373063 ARHGAP5Q13017 1502 aa27.84■■■□□ 2.05
FOXP4-204ENST00000373063 SF3A1Q15459 793 aaKnown RBP27.82■■■□□ 2.04
FOXP4-204ENST00000373063 SYNE3Q6ZMZ3 975 aa27.82■■■□□ 2.04
FOXP4-204ENST00000373063 ANKRD45Q5TZF3 282 aa27.82■■■□□ 2.04
FOXP4-204ENST00000373063 ZKSCAN2Q63HK3 967 aa27.82■■■□□ 2.04
FOXP4-204ENST00000373063 RBM33Q96EV2 1170 aaKnown RBP27.82■■■□□ 2.04
FOXP4-204ENST00000373063 ST18O60284 1047 aa27.81■■■□□ 2.04
FOXP4-204ENST00000373063 CWC22Q9HCG8 908 aaKnown RBP27.81■■■□□ 2.04
FOXP4-204ENST00000373063 E9PSI1 815 aa27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms