RNA–Protein interactions for RNA: ENST00000371454.6

LRP8-204, Transcript of LDL receptor related protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRP8, Length 3,322 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-204ENST00000371454 MIA2Q96PC5 1412 aa25.25■■□□□ 1.63
LRP8-204ENST00000371454 RALBP1Q15311 655 aa25.24■■□□□ 1.63
LRP8-204ENST00000371454 TARBP1Q13395 1621 aaKnown RBP25.24■■□□□ 1.63
LRP8-204ENST00000371454 GCC2Q8IWJ2 1684 aa25.24■■□□□ 1.63
LRP8-204ENST00000371454 TNNT2P45379 298 aaPredicted RBP25.24■■□□□ 1.63
LRP8-204ENST00000371454 ARHGEF11O15085 1522 aa25.24■■□□□ 1.63
LRP8-204ENST00000371454 ANKRD50Q9ULJ7 1429 aa25.23■■□□□ 1.63
LRP8-204ENST00000371454 PLB1Q6P1J6 1458 aa25.23■■□□□ 1.63
LRP8-204ENST00000371454 WDR62O43379 1518 aa25.23■■□□□ 1.63
LRP8-204ENST00000371454 IFT140Q96RY7 1462 aa25.21■■□□□ 1.63
LRP8-204ENST00000371454 SLKQ9H2G2 1235 aaPredicted RBP25.21■■□□□ 1.63
LRP8-204ENST00000371454 PLEKHD1A6NEE1 506 aa25.19■■□□□ 1.62
LRP8-204ENST00000371454 BCAR3O75815 825 aa25.18■■□□□ 1.62
LRP8-204ENST00000371454 WDR43Q15061 677 aaKnown RBP eCLIP25.17■■□□□ 1.62
LRP8-204ENST00000371454 IQGAP2Q13576 1575 aa25.17■■□□□ 1.62
LRP8-204ENST00000371454 BRD4O60885 1362 aaPredicted RBP25.17■■□□□ 1.62
LRP8-204ENST00000371454 ANKRD30AQ9BXX3 1397 aa25.17■■□□□ 1.62
LRP8-204ENST00000371454 DISP3Q9P2K9 1392 aa25.16■■□□□ 1.62
LRP8-204ENST00000371454 CAMSAP2Q08AD1 1489 aa25.16■■□□□ 1.62
LRP8-204ENST00000371454 GSE1Q14687 1217 aa25.16■■□□□ 1.62
LRP8-204ENST00000371454 NUP153P49790 1475 aaKnown RBP25.15■■□□□ 1.62
LRP8-204ENST00000371454 SPINK5Q9NQ38 1064 aaPredicted RBP25.15■■□□□ 1.62
LRP8-204ENST00000371454 LRPPRCP42704 1394 aaKnown RBP25.15■■□□□ 1.62
LRP8-204ENST00000371454 PER1O15534 1290 aaPredicted RBP25.14■■□□□ 1.61
LRP8-204ENST00000371454 PPM1GO15355 546 aaPredicted RBP25.14■■□□□ 1.61
LRP8-204ENST00000371454 ROCK1Q13464 1354 aa25.14■■□□□ 1.61
LRP8-204ENST00000371454 BCL2L13Q9BXK5 485 aa25.13■■□□□ 1.61
LRP8-204ENST00000371454 RRP7AQ9Y3A4 280 aaKnown RBP25.11■■□□□ 1.61
LRP8-204ENST00000371454 APAF1O14727 1248 aa25.09■■□□□ 1.61
LRP8-204ENST00000371454 DMRT2Q9Y5R5 561 aa25.08■■□□□ 1.61
LRP8-204ENST00000371454 CANXP27824 592 aaKnown RBP25.07■■□□□ 1.6
LRP8-204ENST00000371454 KNSTRNQ9Y448 316 aa25.07■■□□□ 1.6
LRP8-204ENST00000371454 SEC24BO95487 1268 aa25.07■■□□□ 1.6
LRP8-204ENST00000371454 KIAA0586Q9BVV6 1533 aa25.06■■□□□ 1.6
LRP8-204ENST00000371454 KDM5CP41229 1560 aa25.05■■□□□ 1.6
LRP8-204ENST00000371454 PLEKHH1Q9ULM0 1364 aa25.05■■□□□ 1.6
LRP8-204ENST00000371454 GPATCH8Q9UKJ3 1502 aaKnown RBP25.05■■□□□ 1.6
LRP8-204ENST00000371454 CLUAP1Q96AJ1 413 aa25.05■■□□□ 1.6
LRP8-204ENST00000371454 PANK1Q8TE04 598 aa25.04■■□□□ 1.6
LRP8-204ENST00000371454 JPH4Q96JJ6 628 aa25.04■■□□□ 1.6
LRP8-204ENST00000371454 EIF4G3O43432 1585 aaKnown RBP25.04■■□□□ 1.6
LRP8-204ENST00000371454 COG6Q9Y2V7 657 aa25.03■■□□□ 1.6
LRP8-204ENST00000371454 MS4A1P11836 297 aa25.03■■□□□ 1.6
LRP8-204ENST00000371454 GZF1Q9H116 711 aaPredicted RBP25.03■■□□□ 1.6
LRP8-204ENST00000371454 PBRM1Q86U86 1689 aa25.03■■□□□ 1.6
LRP8-204ENST00000371454 C8orf34Q49A92 452 aa25.02■■□□□ 1.6
LRP8-204ENST00000371454 DNMT1P26358 1616 aaKnown RBP25.02■■□□□ 1.6
LRP8-204ENST00000371454 ADAMTS12P58397 1594 aa25.02■■□□□ 1.6
LRP8-204ENST00000371454 TNNQ9UQP3 1299 aa25.02■■□□□ 1.6
LRP8-204ENST00000371454 KIF14Q15058 1648 aa25.01■■□□□ 1.59
LRP8-204ENST00000371454 DDRGK1Q96HY6 314 aa25.01■■□□□ 1.59
LRP8-204ENST00000371454 IGHDP01880 384 aa25.01■■□□□ 1.59
LRP8-204ENST00000371454 POGKQ9P215 609 aa25.01■■□□□ 1.59
LRP8-204ENST00000371454 TESK2Q96S53 571 aa25■■□□□ 1.59
LRP8-204ENST00000371454 MBD5Q9P267 1494 aa25■■□□□ 1.59
LRP8-204ENST00000371454 DUSP27Q5VZP5 1158 aa25■■□□□ 1.59
LRP8-204ENST00000371454 TMF1P82094 1093 aa24.99■■□□□ 1.59
LRP8-204ENST00000371454 PDE3BQ13370 1112 aa24.99■■□□□ 1.59
LRP8-204ENST00000371454 C9orf84Q5VXU9 1444 aa24.99■■□□□ 1.59
LRP8-204ENST00000371454 PPP2R1AP30153 589 aa24.98■■□□□ 1.59
LRP8-204ENST00000371454 GOLGA2Q08379 1002 aa24.98■■□□□ 1.59
LRP8-204ENST00000371454 FAM161AQ3B820 660 aa24.98■■□□□ 1.59
LRP8-204ENST00000371454 TROQ12816 1431 aaPredicted RBP24.98■■□□□ 1.59
LRP8-204ENST00000371454 PARD3Q8TEW0 1356 aa24.97■■□□□ 1.59
LRP8-204ENST00000371454 DISP1Q96F81 1524 aa24.96■■□□□ 1.59
LRP8-204ENST00000371454 CCDC144AA2RUR9 1427 aa24.96■■□□□ 1.59
LRP8-204ENST00000371454 RALGAPBQ86X10 1494 aa24.94■■□□□ 1.58
LRP8-204ENST00000371454 USP35Q9P2H5 1018 aa24.94■■□□□ 1.58
LRP8-204ENST00000371454 ARID4BQ4LE39 1312 aaPredicted RBP24.94■■□□□ 1.58
LRP8-204ENST00000371454 CENPQQ7L2Z9 268 aaPredicted RBP24.91■■□□□ 1.58
LRP8-204ENST00000371454 GRIN2AQ12879 1464 aa24.9■■□□□ 1.58
LRP8-204ENST00000371454 WASHC2CQ9Y4E1 1318 aa24.89■■□□□ 1.58
LRP8-204ENST00000371454 KDM2BQ8NHM5 1336 aa24.89■■□□□ 1.57
LRP8-204ENST00000371454 CHGAP10645 457 aaKnown RBP24.87■■□□□ 1.57
LRP8-204ENST00000371454 ERBINQ96RT1 1412 aa24.82■■□□□ 1.56
LRP8-204ENST00000371454 KIAA0556O60303 1618 aa24.82■■□□□ 1.56
LRP8-204ENST00000371454 NUTM2DQ5VT03 806 aaPredicted RBP24.82■■□□□ 1.56
LRP8-204ENST00000371454 CARMIL2Q6F5E8 1435 aa24.81■■□□□ 1.56
LRP8-204ENST00000371454 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.81■■□□□ 1.56
LRP8-204ENST00000371454 RAPGEF6Q8TEU7 1601 aa24.81■■□□□ 1.56
LRP8-204ENST00000371454 SYNJ2O15056 1496 aa24.8■■□□□ 1.56
LRP8-204ENST00000371454 PRAG1Q86YV5 1406 aa24.8■■□□□ 1.56
LRP8-204ENST00000371454 SLFN5Q08AF3 891 aa24.79■■□□□ 1.56
LRP8-204ENST00000371454 POLR1AO95602 1720 aaPredicted RBP24.79■■□□□ 1.56
LRP8-204ENST00000371454 UHRF1BP1Q6BDS2 1440 aa24.79■■□□□ 1.56
LRP8-204ENST00000371454 SAFB2Q14151 953 aaKnown RBP eCLIP24.77■■□□□ 1.56
LRP8-204ENST00000371454 AMER1Q5JTC6 1135 aaPredicted RBP24.76■■□□□ 1.55
LRP8-204ENST00000371454 MAGI1Q96QZ7 1491 aaPredicted RBP24.75■■□□□ 1.55
LRP8-204ENST00000371454 CFAP70Q5T0N1 1121 aa24.74■■□□□ 1.55
LRP8-204ENST00000371454 RLBP1P12271 317 aa24.73■■□□□ 1.55
LRP8-204ENST00000371454 FOXD4L1Q9NU39 408 aa24.73■■□□□ 1.55
LRP8-204ENST00000371454 MAGI2Q86UL8 1455 aa24.72■■□□□ 1.55
LRP8-204ENST00000371454 A2MP01023 1474 aa24.72■■□□□ 1.55
LRP8-204ENST00000371454 PLEKHH2Q8IVE3 1493 aa24.71■■□□□ 1.55
LRP8-204ENST00000371454 PANK2Q9BZ23 570 aa24.71■■□□□ 1.55
LRP8-204ENST00000371454 MFAP1P55081 439 aaKnown RBP24.7■■□□□ 1.54
LRP8-204ENST00000371454 AFAP1Q8N556 730 aa24.7■■□□□ 1.54
LRP8-204ENST00000371454 PCDHB15Q9Y5E8 787 aa24.69■■□□□ 1.54
LRP8-204ENST00000371454 USP19O94966 1318 aa24.69■■□□□ 1.54
LRP8-204ENST00000371454 CEP170Q5SW79 1584 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms