RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 C8orf34Q49A92 452 aa12.65□□□□□ -0.38
LRRC40-201ENST00000370952 E9PCH4 1651 aa12.65□□□□□ -0.38
LRRC40-201ENST00000370952 KDM2BQ8NHM5 1336 aa12.65□□□□□ -0.38
LRRC40-201ENST00000370952 PARD3Q8TEW0 1356 aa12.65□□□□□ -0.39
LRRC40-201ENST00000370952 FAM161AQ3B820 660 aa12.64□□□□□ -0.39
LRRC40-201ENST00000370952 UHRF1BP1Q6BDS2 1440 aa12.63□□□□□ -0.39
LRRC40-201ENST00000370952 IQGAP2Q13576 1575 aa12.62□□□□□ -0.39
LRRC40-201ENST00000370952 CFDP1Q9UEE9 299 aaPredicted RBP12.62□□□□□ -0.39
LRRC40-201ENST00000370952 CENPQQ7L2Z9 268 aaPredicted RBP12.61□□□□□ -0.39
LRRC40-201ENST00000370952 KIAA0586Q9BVV6 1533 aa12.61□□□□□ -0.39
LRRC40-201ENST00000370952 FAM43AQ8N2R8 423 aa12.61□□□□□ -0.39
LRRC40-201ENST00000370952 CAMSAP2Q08AD1 1489 aa12.6□□□□□ -0.39
LRRC40-201ENST00000370952 PER1O15534 1290 aaPredicted RBP12.6□□□□□ -0.39
LRRC40-201ENST00000370952 NUP155O75694 1391 aa12.6□□□□□ -0.39
LRRC40-201ENST00000370952 POGKQ9P215 609 aa12.59□□□□□ -0.39
LRRC40-201ENST00000370952 RSPH6AQ9H0K4 717 aa12.59□□□□□ -0.39
LRRC40-201ENST00000370952 ADGBQ8N7X0 1667 aa12.59□□□□□ -0.39
LRRC40-201ENST00000370952 BLMP54132 1417 aaPredicted RBP12.59□□□□□ -0.39
LRRC40-201ENST00000370952 DNAJC5BQ9UF47 199 aa12.58□□□□□ -0.4
LRRC40-201ENST00000370952 ARXQ96QS3 562 aa12.57□□□□□ -0.4
LRRC40-201ENST00000370952 ADAMTS8Q9UP79 889 aa12.57□□□□□ -0.4
LRRC40-201ENST00000370952 PRG4Q92954 1404 aaPredicted RBP12.57□□□□□ -0.4
LRRC40-201ENST00000370952 ANKRD50Q9ULJ7 1429 aa12.57□□□□□ -0.4
LRRC40-201ENST00000370952 NBPF1Q3BBV0 1214 aa12.57□□□□□ -0.4
LRRC40-201ENST00000370952 ZMYM4Q5VZL5 1548 aa12.56□□□□□ -0.4
LRRC40-201ENST00000370952 PANK3Q9H999 370 aa12.56□□□□□ -0.4
LRRC40-201ENST00000370952 NUP153P49790 1475 aaKnown RBP12.56□□□□□ -0.4
LRRC40-201ENST00000370952 SLKQ9H2G2 1235 aaPredicted RBP12.55□□□□□ -0.4
LRRC40-201ENST00000370952 RRAGDQ9NQL2 400 aaPredicted RBP12.55□□□□□ -0.4
LRRC40-201ENST00000370952 ANKRD30AQ9BXX3 1397 aa12.55□□□□□ -0.4
LRRC40-201ENST00000370952 ARHGEF12Q9NZN5 1544 aa12.55□□□□□ -0.4
LRRC40-201ENST00000370952 RGL3Q3MIN7 710 aa12.55□□□□□ -0.4
LRRC40-201ENST00000370952 PLEKHH1Q9ULM0 1364 aa12.55□□□□□ -0.4
LRRC40-201ENST00000370952 DUSP27Q5VZP5 1158 aa12.55□□□□□ -0.4
LRRC40-201ENST00000370952 ZNF608Q9ULD9 1512 aaPredicted RBP12.54□□□□□ -0.4
LRRC40-201ENST00000370952 DISP3Q9P2K9 1392 aa12.53□□□□□ -0.4
LRRC40-201ENST00000370952 SEC24BO95487 1268 aa12.52□□□□□ -0.4
LRRC40-201ENST00000370952 ADGRL2O95490 1459 aa12.52□□□□□ -0.41
LRRC40-201ENST00000370952 GPATCH8Q9UKJ3 1502 aaKnown RBP12.52□□□□□ -0.41
LRRC40-201ENST00000370952 CROCC2H7BZ55 1655 aa12.52□□□□□ -0.41
LRRC40-201ENST00000370952 PBRM1Q86U86 1689 aa12.52□□□□□ -0.41
LRRC40-201ENST00000370952 USP19O94966 1318 aa12.52□□□□□ -0.41
LRRC40-201ENST00000370952 PLEKHH2Q8IVE3 1493 aa12.51□□□□□ -0.41
LRRC40-201ENST00000370952 PDS5BQ9NTI5 1447 aa12.51□□□□□ -0.41
LRRC40-201ENST00000370952 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.5□□□□□ -0.41
LRRC40-201ENST00000370952 GOLGA2Q08379 1002 aa12.5□□□□□ -0.41
LRRC40-201ENST00000370952 WDR43Q15061 677 aaKnown RBP eCLIP12.5□□□□□ -0.41
LRRC40-201ENST00000370952 CEP170Q5SW79 1584 aa12.5□□□□□ -0.41
LRRC40-201ENST00000370952 RAPGEF6Q8TEU7 1601 aa12.5□□□□□ -0.41
LRRC40-201ENST00000370952 ITSN2Q9NZM3 1697 aa12.49□□□□□ -0.41
LRRC40-201ENST00000370952 TRPM1Q7Z4N2 1603 aa12.49□□□□□ -0.41
LRRC40-201ENST00000370952 TROQ12816 1431 aaPredicted RBP12.49□□□□□ -0.41
LRRC40-201ENST00000370952 BCAR3O75815 825 aa12.49□□□□□ -0.41
LRRC40-201ENST00000370952 IGHDP01880 384 aa12.49□□□□□ -0.41
LRRC40-201ENST00000370952 TARBP1Q13395 1621 aaKnown RBP12.49□□□□□ -0.41
LRRC40-201ENST00000370952 COL17A1Q9UMD9 1497 aaPredicted RBP12.49□□□□□ -0.41
LRRC40-201ENST00000370952 KDM5DQ9BY66 1539 aa12.48□□□□□ -0.41
LRRC40-201ENST00000370952 CCDC146Q8IYE0 955 aa12.48□□□□□ -0.41
LRRC40-201ENST00000370952 TESK2Q96S53 571 aa12.48□□□□□ -0.41
LRRC40-201ENST00000370952 PRAG1Q86YV5 1406 aa12.48□□□□□ -0.41
LRRC40-201ENST00000370952 ADAMTS12P58397 1594 aa12.48□□□□□ -0.41
LRRC40-201ENST00000370952 SPINK5Q9NQ38 1064 aaPredicted RBP12.48□□□□□ -0.41
LRRC40-201ENST00000370952 KIAA0556O60303 1618 aa12.47□□□□□ -0.41
LRRC40-201ENST00000370952 VIRMAQ69YN4 1812 aaKnown RBP12.47□□□□□ -0.41
LRRC40-201ENST00000370952 DISP1Q96F81 1524 aa12.47□□□□□ -0.41
LRRC40-201ENST00000370952 INSRP06213 1382 aa12.47□□□□□ -0.41
LRRC40-201ENST00000370952 C9orf84Q5VXU9 1444 aa12.46□□□□□ -0.41
LRRC40-201ENST00000370952 PPP2R1AP30153 589 aa12.46□□□□□ -0.42
LRRC40-201ENST00000370952 ZNF521Q96K83 1311 aa12.46□□□□□ -0.42
LRRC40-201ENST00000370952 SLFN5Q08AF3 891 aa12.45□□□□□ -0.42
LRRC40-201ENST00000370952 SPRYD3Q8NCJ5 442 aa12.45□□□□□ -0.42
LRRC40-201ENST00000370952 ERBINQ96RT1 1412 aa12.45□□□□□ -0.42
LRRC40-201ENST00000370952 BECN1Q14457 450 aa12.45□□□□□ -0.42
LRRC40-201ENST00000370952 NAP1L5Q96NT1 182 aaPredicted RBP12.45□□□□□ -0.42
LRRC40-201ENST00000370952 L1TD1Q5T7N2 865 aaKnown RBP12.44□□□□□ -0.42
LRRC40-201ENST00000370952 GZF1Q9H116 711 aaPredicted RBP12.44□□□□□ -0.42
LRRC40-201ENST00000370952 TMF1P82094 1093 aa12.44□□□□□ -0.42
LRRC40-201ENST00000370952 TSPY4P0CV99 314 aa12.44□□□□□ -0.42
LRRC40-201ENST00000370952 TSPY10P0CW01 314 aa12.44□□□□□ -0.42
LRRC40-201ENST00000370952 PANK2Q9BZ23 570 aa12.44□□□□□ -0.42
LRRC40-201ENST00000370952 CDC42BPAQ5VT25 1732 aa12.43□□□□□ -0.42
LRRC40-201ENST00000370952 PLB1Q6P1J6 1458 aa12.43□□□□□ -0.42
LRRC40-201ENST00000370952 CCDC144AA2RUR9 1427 aa12.43□□□□□ -0.42
LRRC40-201ENST00000370952 XRCC6P12956 609 aaKnown RBP eCLIP12.43□□□□□ -0.42
LRRC40-201ENST00000370952 HNRNPMP52272 730 aaKnown RBP eCLIP12.43□□□□□ -0.423e-6■■■■□ 25.6
LRRC40-201ENST00000370952 PKNOX2Q96KN3 472 aa12.43□□□□□ -0.42
LRRC40-201ENST00000370952 EIF3AQ14152 1382 aaKnown RBP12.42□□□□□ -0.42
LRRC40-201ENST00000370952 APAF1O14727 1248 aa12.42□□□□□ -0.42
LRRC40-201ENST00000370952 COG6Q9Y2V7 657 aa12.42□□□□□ -0.42
LRRC40-201ENST00000370952 KNSTRNQ9Y448 316 aa12.42□□□□□ -0.42
LRRC40-201ENST00000370952 PANK1Q8TE04 598 aa12.41□□□□□ -0.42
LRRC40-201ENST00000370952 ANTXR1Q9H6X2 564 aa12.41□□□□□ -0.42
LRRC40-201ENST00000370952 DMRT2Q9Y5R5 561 aa12.41□□□□□ -0.42
LRRC40-201ENST00000370952 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.41□□□□□ -0.42
LRRC40-201ENST00000370952 A2MP01023 1474 aa12.41□□□□□ -0.42
LRRC40-201ENST00000370952 GPRASP1Q5JY77 1395 aa12.4□□□□□ -0.42
LRRC40-201ENST00000370952 MAGI2Q86UL8 1455 aa12.4□□□□□ -0.42
LRRC40-201ENST00000370952 NLRP1Q9C000 1473 aa12.4□□□□□ -0.42
LRRC40-201ENST00000370952 EIF4G3O43432 1585 aaKnown RBP12.4□□□□□ -0.42
LRRC40-201ENST00000370952 PNNQ9H307 717 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms