RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 CASKIN1Q8WXD9 1431 aa12.46□□□□□ -0.42
SCAF11-202ENST00000369367 EFCAB5A4FU69 1503 aa12.46□□□□□ -0.42
SCAF11-202ENST00000369367 HMGB2P26583 209 aaKnown RBP12.46□□□□□ -0.42
SCAF11-202ENST00000369367 DNMBPQ6XZF7 1577 aa12.45□□□□□ -0.42
SCAF11-202ENST00000369367 NUTM2FA1L443 756 aa12.45□□□□□ -0.42
SCAF11-202ENST00000369367 ISY1Q9ULR0 285 aaKnown RBP12.45□□□□□ -0.42
SCAF11-202ENST00000369367 ERICH3Q5RHP9 1530 aa12.45□□□□□ -0.42
SCAF11-202ENST00000369367 LTV1Q96GA3 475 aaPredicted RBP12.45□□□□□ -0.42
SCAF11-202ENST00000369367 DCAF8L1A6NGE4 600 aa12.45□□□□□ -0.42
SCAF11-202ENST00000369367 NAP1L2Q9ULW6 460 aaPredicted RBP12.45□□□□□ -0.42
SCAF11-202ENST00000369367 MIA2Q96PC5 1412 aa12.45□□□□□ -0.42
SCAF11-202ENST00000369367 WASHC2AQ641Q2 1341 aa12.44□□□□□ -0.42
SCAF11-202ENST00000369367 TEFQ10587 303 aa12.44□□□□□ -0.42
SCAF11-202ENST00000369367 KIF21BO75037 1637 aa12.44□□□□□ -0.42
SCAF11-202ENST00000369367 SUPT16HQ9Y5B9 1047 aaKnown RBP12.44□□□□□ -0.42
SCAF11-202ENST00000369367 NESP48681 1621 aa12.43□□□□□ -0.42
SCAF11-202ENST00000369367 TTC5Q8N0Z6 440 aa12.43□□□□□ -0.42
SCAF11-202ENST00000369367 NGEFQ8N5V2 710 aa12.43□□□□□ -0.42
SCAF11-202ENST00000369367 RWDD1Q9H446 243 aaPredicted RBP12.43□□□□□ -0.42
SCAF11-202ENST00000369367 SNAPC4Q5SXM2 1469 aa12.42□□□□□ -0.42
SCAF11-202ENST00000369367 PDE3BQ13370 1112 aa12.42□□□□□ -0.42
SCAF11-202ENST00000369367 CHMP3Q9Y3E7 222 aa12.42□□□□□ -0.42
SCAF11-202ENST00000369367 MINK1Q8N4C8 1332 aaPredicted RBP12.41□□□□□ -0.42
SCAF11-202ENST00000369367 GPRASP1Q5JY77 1395 aa12.41□□□□□ -0.42
SCAF11-202ENST00000369367 FGD6Q6ZV73 1430 aa12.41□□□□□ -0.42
SCAF11-202ENST00000369367 GOLGA6L6A8MZA4 724 aa12.41□□□□□ -0.42
SCAF11-202ENST00000369367 NRDCO43847 1150 aa12.41□□□□□ -0.42
SCAF11-202ENST00000369367 RRBP1Q9P2E9 1410 aaKnown RBP12.41□□□□□ -0.42
SCAF11-202ENST00000369367 ANKRD50Q9ULJ7 1429 aa12.41□□□□□ -0.42
SCAF11-202ENST00000369367 RGS3P49796 1198 aa12.41□□□□□ -0.42
SCAF11-202ENST00000369367 GOLGA6L4A6NEF3 574 aa12.4□□□□□ -0.42
SCAF11-202ENST00000369367 SLC52A1Q9NWF4 448 aa12.4□□□□□ -0.42
SCAF11-202ENST00000369367 POLA1P09884 1462 aaPredicted RBP12.4□□□□□ -0.42
SCAF11-202ENST00000369367 HSP90AB1P08238 724 aaKnown RBP12.4□□□□□ -0.42
SCAF11-202ENST00000369367 RUSC2Q8N2Y8 1516 aa12.4□□□□□ -0.43
SCAF11-202ENST00000369367 CENPJQ9HC77 1338 aaPredicted RBP12.39□□□□□ -0.43
SCAF11-202ENST00000369367 NEXNQ0ZGT2 675 aa12.39□□□□□ -0.43
SCAF11-202ENST00000369367 TXNDC2Q86VQ3 553 aa12.39□□□□□ -0.43
SCAF11-202ENST00000369367 SMC4Q9NTJ3 1288 aa12.39□□□□□ -0.43
SCAF11-202ENST00000369367 FRAT2O75474 233 aaPredicted RBP12.38□□□□□ -0.43
SCAF11-202ENST00000369367 LRRFIP1Q32MZ4 808 aaKnown RBP12.38□□□□□ -0.43
SCAF11-202ENST00000369367 ITPRIPQ8IWB1 547 aa12.38□□□□□ -0.43
SCAF11-202ENST00000369367 PMFBP1Q8TBY8 1022 aa12.38□□□□□ -0.43
SCAF11-202ENST00000369367 GNL2Q13823 731 aaKnown RBP12.38□□□□□ -0.43
SCAF11-202ENST00000369367 RAPGEF4Q8WZA2 1011 aa12.38□□□□□ -0.43
SCAF11-202ENST00000369367 ERICH6BQ5W0A0 696 aa12.38□□□□□ -0.43
SCAF11-202ENST00000369367 PROSER2Q86WR7 435 aaPredicted RBP12.38□□□□□ -0.43
SCAF11-202ENST00000369367 ST20-MTHFSA0A0A6YYL1 179 aa12.37□□□□□ -0.43
SCAF11-202ENST00000369367 MSH5O43196 834 aa12.37□□□□□ -0.43
SCAF11-202ENST00000369367 ANKLE2Q86XL3 938 aa12.37□□□□□ -0.43
SCAF11-202ENST00000369367 KIAA0586Q9BVV6 1533 aa12.37□□□□□ -0.43
SCAF11-202ENST00000369367 HSCBQ8IWL3 235 aa12.36□□□□□ -0.43
SCAF11-202ENST00000369367 CCDC34Q96HJ3 373 aa12.36□□□□□ -0.43
SCAF11-202ENST00000369367 TRIM44Q96DX7 344 aaPredicted RBP12.36□□□□□ -0.43
SCAF11-202ENST00000369367 HTATSF1O43719 755 aaKnown RBP12.36□□□□□ -0.43
SCAF11-202ENST00000369367 CHMP4CQ96CF2 233 aa12.36□□□□□ -0.43
SCAF11-202ENST00000369367 TULP1O00294 542 aaPredicted RBP12.36□□□□□ -0.43
SCAF11-202ENST00000369367 HECW1Q76N89 1606 aa12.35□□□□□ -0.43
SCAF11-202ENST00000369367 TROQ12816 1431 aaPredicted RBP12.35□□□□□ -0.43
SCAF11-202ENST00000369367 TOP2BQ02880 1626 aa12.35□□□□□ -0.43
SCAF11-202ENST00000369367 MYBBP1AQ9BQG0 1328 aaKnown RBP12.35□□□□□ -0.43
SCAF11-202ENST00000369367 SENP3-EIF4A1A0A087X0R7 540 aa12.35□□□□□ -0.43
SCAF11-202ENST00000369367 DDX58O95786 925 aaKnown RBP12.35□□□□□ -0.43
SCAF11-202ENST00000369367 AFAP1Q8N556 730 aa12.35□□□□□ -0.43
SCAF11-202ENST00000369367 MAGI1Q96QZ7 1491 aaPredicted RBP12.35□□□□□ -0.43
SCAF11-202ENST00000369367 ANO8Q9HCE9 1232 aaPredicted RBP12.35□□□□□ -0.43
SCAF11-202ENST00000369367 RCAN3Q9UKA8 241 aa12.35□□□□□ -0.43
SCAF11-202ENST00000369367 NCOA2Q15596 1464 aa12.35□□□□□ -0.43
SCAF11-202ENST00000369367 HFM1A2PYH4 1435 aa12.35□□□□□ -0.43
SCAF11-202ENST00000369367 LRRC9Q6ZRR7 1453 aa12.34□□□□□ -0.43
SCAF11-202ENST00000369367 PANK3Q9H999 370 aa12.34□□□□□ -0.43
SCAF11-202ENST00000369367 HSP90B1P14625 803 aaKnown RBP12.34□□□□□ -0.43
SCAF11-202ENST00000369367 EHBP1L1Q8N3D4 1523 aa12.33□□□□□ -0.43
SCAF11-202ENST00000369367 USP47Q96K76 1375 aa12.33□□□□□ -0.44
SCAF11-202ENST00000369367 DIAPH1O60610 1272 aaKnown RBP12.33□□□□□ -0.44
SCAF11-202ENST00000369367 SF3B2Q13435 895 aaKnown RBP12.33□□□□□ -0.44
SCAF11-202ENST00000369367 NOL10Q9BSC4 688 aaKnown RBP12.32□□□□□ -0.44
SCAF11-202ENST00000369367 PHF23Q9BUL5 403 aaPredicted RBP12.32□□□□□ -0.44
SCAF11-202ENST00000369367 SLC4A10Q6U841 1118 aa12.32□□□□□ -0.44
SCAF11-202ENST00000369367 PTMAP06454 111 aaKnown RBP12.32□□□□□ -0.44
SCAF11-202ENST00000369367 SYNJ1O43426 1573 aa12.32□□□□□ -0.44
SCAF11-202ENST00000369367 WWC1Q8IX03 1113 aa12.31□□□□□ -0.44
SCAF11-202ENST00000369367 AMOTL1Q8IY63 956 aa12.31□□□□□ -0.44
SCAF11-202ENST00000369367 RPGRIP1LQ68CZ1 1315 aa12.31□□□□□ -0.44
SCAF11-202ENST00000369367 KIF3AQ9Y496 699 aa12.3□□□□□ -0.44
SCAF11-202ENST00000369367 TAOK2Q9UL54 1235 aa12.3□□□□□ -0.44
SCAF11-202ENST00000369367 SCAPERQ9BY12 1400 aa12.3□□□□□ -0.44
SCAF11-202ENST00000369367 SYTL4Q96C24 671 aaPredicted RBP12.3□□□□□ -0.44
SCAF11-202ENST00000369367 DMRT2Q9Y5R5 561 aa12.3□□□□□ -0.44
SCAF11-202ENST00000369367 ABCA10Q8WWZ4 1543 aa12.29□□□□□ -0.44
SCAF11-202ENST00000369367 APBB1O00213 710 aa12.29□□□□□ -0.44
SCAF11-202ENST00000369367 L1TD1Q5T7N2 865 aaKnown RBP12.29□□□□□ -0.44
SCAF11-202ENST00000369367 C9orf84Q5VXU9 1444 aa12.28□□□□□ -0.44
SCAF11-202ENST00000369367 NLRP2Q9NX02 1062 aa12.28□□□□□ -0.44
SCAF11-202ENST00000369367 ZNF644Q9H582 1327 aaPredicted RBP12.28□□□□□ -0.44
SCAF11-202ENST00000369367 SMG6Q86US8 1419 aaKnown RBP12.28□□□□□ -0.44
SCAF11-202ENST00000369367 PTMSP20962 102 aa12.28□□□□□ -0.44
SCAF11-202ENST00000369367 NLRP6P59044 892 aa12.28□□□□□ -0.44
SCAF11-202ENST00000369367 E9PSI1 815 aa12.28□□□□□ -0.44
SCAF11-202ENST00000369367 CUL7Q14999 1698 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms