RNA–Protein interactions for RNA: ENST00000368445.9

SHC1-202, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-202ENST00000368445 TMC1Q8TDI8 760 aa18.88■□□□□ 0.61
SHC1-202ENST00000368445 ADGBQ8N7X0 1667 aa18.88■□□□□ 0.61
SHC1-202ENST00000368445 SALL2Q9Y467 1007 aaPredicted RBP18.86■□□□□ 0.61
SHC1-202ENST00000368445 CDC42BPBQ9Y5S2 1711 aa18.83■□□□□ 0.61
SHC1-202ENST00000368445 ARHGEF12Q9NZN5 1544 aa18.82■□□□□ 0.6
SHC1-202ENST00000368445 FAM135AQ9P2D6 1515 aa18.82■□□□□ 0.6
SHC1-202ENST00000368445 KANK1Q14678 1352 aa18.81■□□□□ 0.6
SHC1-202ENST00000368445 PREX2Q70Z35 1606 aa18.81■□□□□ 0.6
SHC1-202ENST00000368445 SHROOM2Q13796 1616 aa18.81■□□□□ 0.6
SHC1-202ENST00000368445 ARHGEF5Q12774 1597 aa18.79■□□□□ 0.6
SHC1-202ENST00000368445 FANCAO15360 1455 aa18.79■□□□□ 0.6
SHC1-202ENST00000368445 CC2D1BQ5T0F9 858 aaKnown RBP18.79■□□□□ 0.6
SHC1-202ENST00000368445 ASXL2Q76L83 1435 aa18.79■□□□□ 0.6
SHC1-202ENST00000368445 ZCCHC11Q5TAX3 1644 aaKnown RBP18.79■□□□□ 0.6
SHC1-202ENST00000368445 CROCC2H7BZ55 1655 aa18.78■□□□□ 0.6
SHC1-202ENST00000368445 RAPGEF3O95398 923 aa18.77■□□□□ 0.6
SHC1-202ENST00000368445 CLASP1Q7Z460 1538 aa18.77■□□□□ 0.6
SHC1-202ENST00000368445 WDR7Q9Y4E6 1490 aa18.77■□□□□ 0.6
SHC1-202ENST00000368445 MYO5CQ9NQX4 1742 aa18.75■□□□□ 0.59
SHC1-202ENST00000368445 ADGRL1O94910 1474 aa18.75■□□□□ 0.59
SHC1-202ENST00000368445 SPATA31E1Q6ZUB1 1445 aa18.75■□□□□ 0.59
SHC1-202ENST00000368445 NUTM2DQ5VT03 806 aaPredicted RBP18.73■□□□□ 0.59
SHC1-202ENST00000368445 UHRF1BP1LA0JNW5 1464 aa18.73■□□□□ 0.59
SHC1-202ENST00000368445 TMF1P82094 1093 aa18.73■□□□□ 0.59
SHC1-202ENST00000368445 DUOX2Q9NRD8 1548 aa18.71■□□□□ 0.59
SHC1-202ENST00000368445 WASHC2CQ9Y4E1 1318 aa18.71■□□□□ 0.58
SHC1-202ENST00000368445 CD109Q6YHK3 1445 aa18.69■□□□□ 0.58
SHC1-202ENST00000368445 PANK3Q9H999 370 aa18.69■□□□□ 0.58
SHC1-202ENST00000368445 PLA2R1Q13018 1463 aa18.67■□□□□ 0.58
SHC1-202ENST00000368445 ERBINQ96RT1 1412 aa18.67■□□□□ 0.58
SHC1-202ENST00000368445 RALGAPBQ86X10 1494 aa18.66■□□□□ 0.58
SHC1-202ENST00000368445 CFAP70Q5T0N1 1121 aa18.65■□□□□ 0.58
SHC1-202ENST00000368445 PRAG1Q86YV5 1406 aa18.64■□□□□ 0.57
SHC1-202ENST00000368445 ARID4BQ4LE39 1312 aaPredicted RBP18.64■□□□□ 0.57
SHC1-202ENST00000368445 UHRF1BP1Q6BDS2 1440 aa18.64■□□□□ 0.57
SHC1-202ENST00000368445 ABCC1P33527 1531 aa18.63■□□□□ 0.57
SHC1-202ENST00000368445 FAM69CQ0P6D2 419 aa18.63■□□□□ 0.57
SHC1-202ENST00000368445 KNSTRNQ9Y448 316 aa18.63■□□□□ 0.57
SHC1-202ENST00000368445 MLECQ14165 292 aa18.62■□□□□ 0.57
SHC1-202ENST00000368445 A2MP01023 1474 aa18.62■□□□□ 0.57
SHC1-202ENST00000368445 DHX29Q7Z478 1369 aaKnown RBP18.62■□□□□ 0.57
SHC1-202ENST00000368445 KDM5DQ9BY66 1539 aa18.61■□□□□ 0.57
SHC1-202ENST00000368445 KTN1Q86UP2 1357 aaKnown RBP18.6■□□□□ 0.57
SHC1-202ENST00000368445 RALBP1Q15311 655 aa18.59■□□□□ 0.57
SHC1-202ENST00000368445 STAG3Q9UJ98 1225 aa18.59■□□□□ 0.57
SHC1-202ENST00000368445 TRAK1Q9UPV9 953 aa18.59■□□□□ 0.57
SHC1-202ENST00000368445 SAFB2Q14151 953 aaKnown RBP eCLIP18.58■□□□□ 0.57
SHC1-202ENST00000368445 MYBBP1AQ9BQG0 1328 aaKnown RBP18.57■□□□□ 0.56
SHC1-202ENST00000368445 RTEL1-TNFRSF6BF6WH68 1400 aa18.57■□□□□ 0.56
SHC1-202ENST00000368445 DISP3Q9P2K9 1392 aa18.57■□□□□ 0.56
SHC1-202ENST00000368445 TMEM132EQ6IEE7 984 aa18.56■□□□□ 0.56
SHC1-202ENST00000368445 TESK2Q96S53 571 aa18.56■□□□□ 0.56
SHC1-202ENST00000368445 ZBED9Q6R2W3 1325 aa18.56■□□□□ 0.56
SHC1-202ENST00000368445 ADGRF5Q8IZF2 1346 aa18.56■□□□□ 0.56
SHC1-202ENST00000368445 ATP7AQ04656 1500 aa18.55■□□□□ 0.56
SHC1-202ENST00000368445 CDCA8Q53HL2 280 aa18.55■□□□□ 0.56
SHC1-202ENST00000368445 PNISRQ8TF01 805 aaKnown RBP18.55■□□□□ 0.56
SHC1-202ENST00000368445 NLRP13Q86W25 1043 aa18.55■□□□□ 0.56
SHC1-202ENST00000368445 BCORL1Q5H9F3 1711 aa18.55■□□□□ 0.56
SHC1-202ENST00000368445 MAST1Q9Y2H9 1570 aa18.54■□□□□ 0.56
SHC1-202ENST00000368445 PLPPR3Q6T4P5 718 aa18.54■□□□□ 0.56
SHC1-202ENST00000368445 KDM5CP41229 1560 aa18.53■□□□□ 0.56
SHC1-202ENST00000368445 STK26Q9P289 416 aa18.53■□□□□ 0.56
SHC1-202ENST00000368445 PLXNC1O60486 1568 aa18.53■□□□□ 0.56
SHC1-202ENST00000368445 TNNT2P45379 298 aaPredicted RBP18.53■□□□□ 0.56
SHC1-202ENST00000368445 CFAP65Q6ZU64 1925 aaKnown RBP18.53■□□□□ 0.56
SHC1-202ENST00000368445 ZFYVE16Q7Z3T8 1539 aa18.5■□□□□ 0.55
SHC1-202ENST00000368445 B4GALNT3Q6L9W6 998 aa18.5■□□□□ 0.55
SHC1-202ENST00000368445 ZNF518AQ6AHZ1 1483 aa18.5■□□□□ 0.55
SHC1-202ENST00000368445 WDR43Q15061 677 aaKnown RBP eCLIP18.49■□□□□ 0.557e-6■■■■■ 27.3
SHC1-202ENST00000368445 UNC13BO14795 1591 aa18.49■□□□□ 0.55
SHC1-202ENST00000368445 ATP10AO60312 1499 aa18.48■□□□□ 0.55
SHC1-202ENST00000368445 ESF1Q9H501 851 aaKnown RBP18.47■□□□□ 0.55
SHC1-202ENST00000368445 IQGAP3Q86VI3 1631 aa18.47■□□□□ 0.55
SHC1-202ENST00000368445 TSHZ2Q9NRE2 1034 aa18.47■□□□□ 0.55
SHC1-202ENST00000368445 PER1O15534 1290 aaPredicted RBP18.45■□□□□ 0.54
SHC1-202ENST00000368445 UGGT1Q9NYU2 1555 aa18.45■□□□□ 0.54
SHC1-202ENST00000368445 STAC3Q96MF2 364 aa18.45■□□□□ 0.54
SHC1-202ENST00000368445 EIF3AQ14152 1382 aaKnown RBP18.44■□□□□ 0.54
SHC1-202ENST00000368445 NUDCQ9Y266 331 aa18.44■□□□□ 0.54
SHC1-202ENST00000368445 BRD4O60885 1362 aaPredicted RBP18.42■□□□□ 0.54
SHC1-202ENST00000368445 GPRASP1Q5JY77 1395 aa18.42■□□□□ 0.54
SHC1-202ENST00000368445 ABCA9Q8IUA7 1624 aa18.42■□□□□ 0.54
SHC1-202ENST00000368445 ARAP3Q8WWN8 1544 aa18.41■□□□□ 0.54
SHC1-202ENST00000368445 FBXO31Q5XUX0 539 aaPredicted RBP18.41■□□□□ 0.54
SHC1-202ENST00000368445 IDI1Q13907 227 aa18.4■□□□□ 0.54
SHC1-202ENST00000368445 PPP4R2Q9NY27 417 aa18.4■□□□□ 0.54
SHC1-202ENST00000368445 NOS1P29475 1434 aa18.4■□□□□ 0.54
SHC1-202ENST00000368445 POGZQ7Z3K3 1410 aa18.39■□□□□ 0.54
SHC1-202ENST00000368445 CENPJQ9HC77 1338 aaPredicted RBP18.39■□□□□ 0.53
SHC1-202ENST00000368445 VGFO15240 615 aaPredicted RBP18.39■□□□□ 0.53
SHC1-202ENST00000368445 CCDC136Q96JN2 1154 aa18.39■□□□□ 0.53
SHC1-202ENST00000368445 CDCA7LQ96GN5 454 aa18.38■□□□□ 0.53
SHC1-202ENST00000368445 MAGI2Q86UL8 1455 aa18.38■□□□□ 0.53
SHC1-202ENST00000368445 CCDC146Q8IYE0 955 aa18.37■□□□□ 0.53
SHC1-202ENST00000368445 ADAMTS8Q9UP79 889 aa18.37■□□□□ 0.53
SHC1-202ENST00000368445 E9PCH4 1651 aa18.37■□□□□ 0.53
SHC1-202ENST00000368445 POGKQ9P215 609 aa18.37■□□□□ 0.53
SHC1-202ENST00000368445 SLC12A5Q9H2X9 1139 aa18.37■□□□□ 0.53
SHC1-202ENST00000368445 PTPRTO14522 1441 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms