RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 FBXW7Q969H0 707 aa9.66□□□□□ -0.86
ECHDC1-204ENST00000368292 CUX2O14529 1486 aa9.66□□□□□ -0.86
ECHDC1-204ENST00000368292 BCL2L12Q9HB09 334 aa9.65□□□□□ -0.86
ECHDC1-204ENST00000368292 EN1Q05925 392 aaPredicted RBP9.64□□□□□ -0.87
ECHDC1-204ENST00000368292 EIF4G1Q04637 1599 aaKnown RBP9.63□□□□□ -0.87
ECHDC1-204ENST00000368292 CDAN1Q8IWY9 1227 aa9.63□□□□□ -0.87
ECHDC1-204ENST00000368292 RBM33Q96EV2 1170 aaKnown RBP9.63□□□□□ -0.87
ECHDC1-204ENST00000368292 KRTAP3-3Q9BYR6 98 aa9.62□□□□□ -0.87
ECHDC1-204ENST00000368292 KRTAP3-2Q9BYR7 98 aa9.62□□□□□ -0.87
ECHDC1-204ENST00000368292 AXIN2Q9Y2T1 843 aa9.62□□□□□ -0.87
ECHDC1-204ENST00000368292 TSR1Q2NL82 804 aaKnown RBP9.61□□□□□ -0.87
ECHDC1-204ENST00000368292 C6orf132Q5T0Z8 1188 aa9.61□□□□□ -0.87
ECHDC1-204ENST00000368292 RBM26Q5T8P6 1007 aaKnown RBP9.61□□□□□ -0.87
ECHDC1-204ENST00000368292 ARHGAP33O14559 1287 aa9.6□□□□□ -0.87
ECHDC1-204ENST00000368292 PSEN2P49810 448 aa9.6□□□□□ -0.87
ECHDC1-204ENST00000368292 SMYD5Q6GMV2 418 aa9.6□□□□□ -0.87
ECHDC1-204ENST00000368292 MAP3K7O43318 606 aa9.59□□□□□ -0.87
ECHDC1-204ENST00000368292 PBX2P40425 430 aa9.59□□□□□ -0.87
ECHDC1-204ENST00000368292 TPRNQ4KMQ1 711 aa9.59□□□□□ -0.87
ECHDC1-204ENST00000368292 KCNK17Q96T54 332 aa9.59□□□□□ -0.87
ECHDC1-204ENST00000368292 COL9A1P20849 921 aa9.58□□□□□ -0.88
ECHDC1-204ENST00000368292 PTPREP23469 700 aa9.58□□□□□ -0.88
ECHDC1-204ENST00000368292 DMRTA1Q5VZB9 504 aa9.58□□□□□ -0.88
ECHDC1-204ENST00000368292 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.58□□□□□ -0.88
ECHDC1-204ENST00000368292 CDHR5Q9HBB8 845 aa9.58□□□□□ -0.88
ECHDC1-204ENST00000368292 NPDC1Q9NQX5 325 aaPredicted RBP9.56□□□□□ -0.88
ECHDC1-204ENST00000368292 PPP1R3GB7ZBB8 358 aa9.54□□□□□ -0.88
ECHDC1-204ENST00000368292 LSM11P83369 360 aaKnown RBP eCLIP9.54□□□□□ -0.88
ECHDC1-204ENST00000368292 PCDH10Q9P2E7 1040 aa9.54□□□□□ -0.88
ECHDC1-204ENST00000368292 ZBED2Q9BTP6 218 aa9.53□□□□□ -0.88
ECHDC1-204ENST00000368292 SHROOM4Q9ULL8 1493 aa9.53□□□□□ -0.88
ECHDC1-204ENST00000368292 NUTM2FA1L443 756 aa9.52□□□□□ -0.89
ECHDC1-204ENST00000368292 GPR37O15354 613 aa9.52□□□□□ -0.89
ECHDC1-204ENST00000368292 LMOD2Q6P5Q4 547 aa9.52□□□□□ -0.89
ECHDC1-204ENST00000368292 TULP1O00294 542 aaPredicted RBP9.51□□□□□ -0.89
ECHDC1-204ENST00000368292 PTGDRQ13258 359 aa9.51□□□□□ -0.89
ECHDC1-204ENST00000368292 SLC4A5Q9BY07 1137 aa9.51□□□□□ -0.89
ECHDC1-204ENST00000368292 KCNH8Q96L42 1107 aa9.5□□□□□ -0.89
ECHDC1-204ENST00000368292 PROX2Q3B8N5 592 aa9.49□□□□□ -0.89
ECHDC1-204ENST00000368292 ANKRD13DQ6ZTN6 518 aa9.49□□□□□ -0.89
ECHDC1-204ENST00000368292 CERKQ8TCT0 537 aa9.49□□□□□ -0.89
ECHDC1-204ENST00000368292 VPS9D1Q9Y2B5 631 aa9.49□□□□□ -0.89
ECHDC1-204ENST00000368292 TK2O00142 265 aa9.48□□□□□ -0.89
ECHDC1-204ENST00000368292 GPIHBP1Q8IV16 184 aa9.48□□□□□ -0.89
ECHDC1-204ENST00000368292 PRSS12P56730 875 aa9.47□□□□□ -0.89
ECHDC1-204ENST00000368292 ADGRD1Q6QNK2 874 aa9.47□□□□□ -0.89
ECHDC1-204ENST00000368292 FAM198AQ9UFP1 575 aa9.47□□□□□ -0.89
ECHDC1-204ENST00000368292 FCHSD2O94868 740 aa9.46□□□□□ -0.9
ECHDC1-204ENST00000368292 TTC13Q8NBP0 860 aa9.46□□□□□ -0.9
ECHDC1-204ENST00000368292 CDCA7LQ96GN5 454 aa9.46□□□□□ -0.9
ECHDC1-204ENST00000368292 TSKSQ9UJT2 592 aa9.46□□□□□ -0.9
ECHDC1-204ENST00000368292 TRIM6-TRIM34B2RNG4 842 aa9.45□□□□□ -0.9
ECHDC1-204ENST00000368292 HRO43593 1189 aa9.45□□□□□ -0.9
ECHDC1-204ENST00000368292 BHMG1C9JSJ3 638 aaPredicted RBP9.44□□□□□ -0.9
ECHDC1-204ENST00000368292 ONECUT3O60422 494 aaPredicted RBP9.44□□□□□ -0.9
ECHDC1-204ENST00000368292 FECHP22830 423 aa9.44□□□□□ -0.9
ECHDC1-204ENST00000368292 HIC1Q14526 733 aa9.44□□□□□ -0.9
ECHDC1-204ENST00000368292 RBM27Q9P2N5 1060 aaKnown RBP9.44□□□□□ -0.9
ECHDC1-204ENST00000368292 C3orf80F5H4A9 247 aa9.43□□□□□ -0.9
ECHDC1-204ENST00000368292 PADI6Q6TGC4 694 aa9.43□□□□□ -0.9
ECHDC1-204ENST00000368292 GNPATO15228 680 aa9.42□□□□□ -0.9
ECHDC1-204ENST00000368292 ZC3H15Q8WU90 426 aaKnown RBP9.42□□□□□ -0.9
ECHDC1-204ENST00000368292 KIAA1468Q9P260 1216 aa9.42□□□□□ -0.9
ECHDC1-204ENST00000368292 RABGEF1Q9UJ41 708 aa9.42□□□□□ -0.9
ECHDC1-204ENST00000368292 MYO15BQ96JP2 1530 aa9.41□□□□□ -0.9
ECHDC1-204ENST00000368292 SPNS2Q8IVW8 549 aa9.4□□□□□ -0.9
ECHDC1-204ENST00000368292 ERCC6Q03468 1493 aa9.4□□□□□ -0.91
ECHDC1-204ENST00000368292 ZMYND10O75800 440 aa9.38□□□□□ -0.91
ECHDC1-204ENST00000368292 PACS2Q86VP3 889 aa9.38□□□□□ -0.91
ECHDC1-204ENST00000368292 TATDN2Q93075 761 aa9.37□□□□□ -0.91
ECHDC1-204ENST00000368292 FAM161AQ3B820 660 aa9.36□□□□□ -0.91
ECHDC1-204ENST00000368292 BARGINQ6ZT62 677 aa9.36□□□□□ -0.91
ECHDC1-204ENST00000368292 ADGRG1Q9Y653 693 aa9.36□□□□□ -0.91
ECHDC1-204ENST00000368292 SMAPO00193 183 aa9.35□□□□□ -0.91
ECHDC1-204ENST00000368292 NUDT18Q6ZVK8 323 aa9.35□□□□□ -0.91
ECHDC1-204ENST00000368292 EYA1Q99502 592 aa9.35□□□□□ -0.91
ECHDC1-204ENST00000368292 SEPT9Q9UHD8 586 aaPredicted RBP9.35□□□□□ -0.91
ECHDC1-204ENST00000368292 PNMA3Q9UL41 463 aa9.34□□□□□ -0.91
ECHDC1-204ENST00000368292 NBPF26B4DH59 902 aa9.33□□□□□ -0.92
ECHDC1-204ENST00000368292 LAPTM4BQ86VI4 370 aa9.33□□□□□ -0.92
ECHDC1-204ENST00000368292 MRPL50Q8N5N7 158 aaKnown RBP9.33□□□□□ -0.92
ECHDC1-204ENST00000368292 NBPF3Q9H094 633 aa9.33□□□□□ -0.92
ECHDC1-204ENST00000368292 MAP2K5Q13163 448 aa9.32□□□□□ -0.92
ECHDC1-204ENST00000368292 IRF6O14896 467 aa9.31□□□□□ -0.92
ECHDC1-204ENST00000368292 FAM98CQ17RN3 349 aaKnown RBP9.31□□□□□ -0.92
ECHDC1-204ENST00000368292 MINK1Q8N4C8 1332 aaPredicted RBP9.31□□□□□ -0.92
ECHDC1-204ENST00000368292 METTL3Q86U44 580 aaKnown RBP9.3□□□□□ -0.92
ECHDC1-204ENST00000368292 PXYLP1Q8TE99 480 aa9.3□□□□□ -0.92
ECHDC1-204ENST00000368292 MYT1LQ9UL68 1186 aa9.3□□□□□ -0.92
ECHDC1-204ENST00000368292 MMRN1Q13201 1228 aa9.29□□□□□ -0.92
ECHDC1-204ENST00000368292 RBM46Q8TBY0 533 aaKnown RBP9.29□□□□□ -0.92
ECHDC1-204ENST00000368292 ZFRQ96KR1 1074 aaKnown RBP9.29□□□□□ -0.92
ECHDC1-204ENST00000368292 STAC3Q96MF2 364 aa9.29□□□□□ -0.92
ECHDC1-204ENST00000368292 PHOX2BQ99453 314 aa9.29□□□□□ -0.92
ECHDC1-204ENST00000368292 DAXXQ9UER7 740 aaPredicted RBP9.29□□□□□ -0.92
ECHDC1-204ENST00000368292 OATP04181 439 aa9.28□□□□□ -0.92
ECHDC1-204ENST00000368292 THOC2Q8NI27 1593 aaKnown RBP9.28□□□□□ -0.92
ECHDC1-204ENST00000368292 KRI1Q8N9T8 703 aaKnown RBP9.27□□□□□ -0.93
ECHDC1-204ENST00000368292 CCDC102AQ96A19 550 aa9.27□□□□□ -0.93
ECHDC1-204ENST00000368292 SCRIBQ14160 1630 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms