RNA–Protein interactions for RNA: ENST00000367178.7

SCAF8-201, Transcript of SR-related CTD associated factor 8, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCAF8, Length 5,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-201ENST00000367178 GOLGA6L4A6NEF3 574 aa20.85■□□□□ 0.93
SCAF8-201ENST00000367178 CGNL1Q0VF96 1302 aa20.84■□□□□ 0.93
SCAF8-201ENST00000367178 KIF21BO75037 1637 aa20.84■□□□□ 0.93
SCAF8-201ENST00000367178 SPRYD3Q8NCJ5 442 aa20.83■□□□□ 0.93
SCAF8-201ENST00000367178 MINK1Q8N4C8 1332 aaPredicted RBP20.83■□□□□ 0.93
SCAF8-201ENST00000367178 RRP7AQ9Y3A4 280 aaKnown RBP20.83■□□□□ 0.93
SCAF8-201ENST00000367178 CUX1P39880 1505 aa20.82■□□□□ 0.92
SCAF8-201ENST00000367178 FAM69CQ0P6D2 419 aa20.82■□□□□ 0.92
SCAF8-201ENST00000367178 CCDC9Q9Y3X0 531 aaKnown RBP20.82■□□□□ 0.92
SCAF8-201ENST00000367178 SLC4A10Q6U841 1118 aa20.81■□□□□ 0.92
SCAF8-201ENST00000367178 HDAC5Q9UQL6 1122 aa20.81■□□□□ 0.92
SCAF8-201ENST00000367178 GRIN2BQ13224 1484 aa20.81■□□□□ 0.92
SCAF8-201ENST00000367178 COG3Q96JB2 828 aa20.81■□□□□ 0.92
SCAF8-201ENST00000367178 HMMRO75330 724 aa20.81■□□□□ 0.92
SCAF8-201ENST00000367178 CFTRP13569 1480 aa20.81■□□□□ 0.92
SCAF8-201ENST00000367178 LRRC9Q6ZRR7 1453 aa20.81■□□□□ 0.92
SCAF8-201ENST00000367178 DNTTIP2Q5QJE6 756 aaKnown RBP20.8■□□□□ 0.92
SCAF8-201ENST00000367178 CASKIN1Q8WXD9 1431 aa20.79■□□□□ 0.92
SCAF8-201ENST00000367178 TULP1O00294 542 aaPredicted RBP20.78■□□□□ 0.92
SCAF8-201ENST00000367178 ANKRD50Q9ULJ7 1429 aa20.77■□□□□ 0.91
SCAF8-201ENST00000367178 NCOA2Q15596 1464 aa20.75■□□□□ 0.91
SCAF8-201ENST00000367178 CHMP3Q9Y3E7 222 aa20.75■□□□□ 0.91
SCAF8-201ENST00000367178 FYCO1Q9BQS8 1478 aa20.74■□□□□ 0.91
SCAF8-201ENST00000367178 STAC3Q96MF2 364 aa20.74■□□□□ 0.91
SCAF8-201ENST00000367178 GORABQ5T7V8 394 aa20.73■□□□□ 0.91
SCAF8-201ENST00000367178 ELL2O00472 640 aaPredicted RBP20.72■□□□□ 0.91
SCAF8-201ENST00000367178 RTN4Q9NQC3 1192 aaKnown RBP20.72■□□□□ 0.91
SCAF8-201ENST00000367178 PRDM2Q13029 1718 aa20.71■□□□□ 0.91
SCAF8-201ENST00000367178 TAF7LQ5H9L4 462 aa20.71■□□□□ 0.91
SCAF8-201ENST00000367178 NESP48681 1621 aa20.71■□□□□ 0.91
SCAF8-201ENST00000367178 E9PSI1 815 aa20.7■□□□□ 0.9
SCAF8-201ENST00000367178 MFAP1P55081 439 aaKnown RBP20.7■□□□□ 0.9
SCAF8-201ENST00000367178 AFAP1Q8N556 730 aa20.7■□□□□ 0.9
SCAF8-201ENST00000367178 GPATCH3Q96I76 525 aa20.7■□□□□ 0.9
SCAF8-201ENST00000367178 ERICH3Q5RHP9 1530 aa20.7■□□□□ 0.9
SCAF8-201ENST00000367178 TRIM6-TRIM34B2RNG4 842 aa20.7■□□□□ 0.9
SCAF8-201ENST00000367178 BCL2L13Q9BXK5 485 aa20.7■□□□□ 0.9
SCAF8-201ENST00000367178 ISY1Q9ULR0 285 aaKnown RBP20.69■□□□□ 0.9
SCAF8-201ENST00000367178 ARAP1Q96P48 1450 aa20.69■□□□□ 0.9
SCAF8-201ENST00000367178 GOLGA6L6A8MZA4 724 aa20.69■□□□□ 0.9
SCAF8-201ENST00000367178 APAF1O14727 1248 aa20.69■□□□□ 0.9
SCAF8-201ENST00000367178 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.68■□□□□ 0.9
SCAF8-201ENST00000367178 SYNJ1O43426 1573 aa20.68■□□□□ 0.9
SCAF8-201ENST00000367178 SLKQ9H2G2 1235 aaPredicted RBP20.68■□□□□ 0.9
SCAF8-201ENST00000367178 ZBED9Q6R2W3 1325 aa20.68■□□□□ 0.9
SCAF8-201ENST00000367178 NRDCO43847 1150 aa20.68■□□□□ 0.9
SCAF8-201ENST00000367178 PRG4Q92954 1404 aaPredicted RBP20.66■□□□□ 0.9
SCAF8-201ENST00000367178 GNL2Q13823 731 aaKnown RBP20.66■□□□□ 0.9
SCAF8-201ENST00000367178 SYNJ2O15056 1496 aa20.66■□□□□ 0.9
SCAF8-201ENST00000367178 DIAPH1O60610 1272 aaKnown RBP20.65■□□□□ 0.9
SCAF8-201ENST00000367178 GBP4Q96PP9 640 aa20.65■□□□□ 0.9
SCAF8-201ENST00000367178 C1orf141Q5JVX7 400 aa20.65■□□□□ 0.9
SCAF8-201ENST00000367178 MRC2Q9UBG0 1479 aa20.64■□□□□ 0.9
SCAF8-201ENST00000367178 TEFQ10587 303 aa20.64■□□□□ 0.89
SCAF8-201ENST00000367178 KIF7Q2M1P5 1343 aa20.64■□□□□ 0.89
SCAF8-201ENST00000367178 ZKSCAN2Q63HK3 967 aa20.64■□□□□ 0.89
SCAF8-201ENST00000367178 PLIN1O60240 522 aa20.63■□□□□ 0.89
SCAF8-201ENST00000367178 CCDC7Q96M83 1385 aa20.63■□□□□ 0.89
SCAF8-201ENST00000367178 ARHGAP5Q13017 1502 aa20.62■□□□□ 0.89
SCAF8-201ENST00000367178 IFT140Q96RY7 1462 aa20.61■□□□□ 0.89
SCAF8-201ENST00000367178 L1TD1Q5T7N2 865 aaKnown RBP20.61■□□□□ 0.89
SCAF8-201ENST00000367178 NGEFQ8N5V2 710 aa20.61■□□□□ 0.89
SCAF8-201ENST00000367178 TOPBP1Q92547 1522 aa20.61■□□□□ 0.89
SCAF8-201ENST00000367178 RRP1P56182 461 aaKnown RBP20.6■□□□□ 0.89
SCAF8-201ENST00000367178 TMX4Q9H1E5 349 aaPredicted RBP20.6■□□□□ 0.89
SCAF8-201ENST00000367178 PRXQ9BXM0 1461 aa20.59■□□□□ 0.89
SCAF8-201ENST00000367178 PSME1Q06323 249 aa20.59■□□□□ 0.89
SCAF8-201ENST00000367178 GTF2E1P29083 439 aaPredicted RBP20.58■□□□□ 0.89
SCAF8-201ENST00000367178 CENPQQ7L2Z9 268 aaPredicted RBP20.58■□□□□ 0.89
SCAF8-201ENST00000367178 POLA1P09884 1462 aaPredicted RBP20.58■□□□□ 0.89
SCAF8-201ENST00000367178 TMEM132EQ6IEE7 984 aa20.58■□□□□ 0.88
SCAF8-201ENST00000367178 MIA2Q96PC5 1412 aa20.58■□□□□ 0.88
SCAF8-201ENST00000367178 HMGXB3Q12766 1538 aa20.58■□□□□ 0.88
SCAF8-201ENST00000367178 TSHZ2Q9NRE2 1034 aa20.58■□□□□ 0.88
SCAF8-201ENST00000367178 EVA1CP58658 441 aa20.57■□□□□ 0.88
SCAF8-201ENST00000367178 COG6Q9Y2V7 657 aa20.57■□□□□ 0.88
SCAF8-201ENST00000367178 EXOC6Q8TAG9 804 aa20.57■□□□□ 0.88
SCAF8-201ENST00000367178 NAP1L5Q96NT1 182 aaPredicted RBP20.57■□□□□ 0.88
SCAF8-201ENST00000367178 RIPK4P57078 832 aa20.57■□□□□ 0.88
SCAF8-201ENST00000367178 CC2D2AQ9P2K1 1620 aa20.56■□□□□ 0.88
SCAF8-201ENST00000367178 PTMSP20962 102 aa20.55■□□□□ 0.88
SCAF8-201ENST00000367178 CRBNQ96SW2 442 aa20.55■□□□□ 0.88
SCAF8-201ENST00000367178 EFCAB5A4FU69 1503 aa20.55■□□□□ 0.88
SCAF8-201ENST00000367178 IPO9Q96P70 1041 aaKnown RBP20.54■□□□□ 0.88
SCAF8-201ENST00000367178 RRBP1Q9P2E9 1410 aaKnown RBP20.54■□□□□ 0.88
SCAF8-201ENST00000367178 HTATSF1O43719 755 aaKnown RBP20.54■□□□□ 0.88
SCAF8-201ENST00000367178 CFAP70Q5T0N1 1121 aa20.54■□□□□ 0.88
SCAF8-201ENST00000367178 ANKRD45Q5TZF3 282 aa20.54■□□□□ 0.88
SCAF8-201ENST00000367178 GGNBP2Q9H3C7 697 aa20.53■□□□□ 0.88
SCAF8-201ENST00000367178 RUNDC1Q96C34 613 aa20.53■□□□□ 0.88
SCAF8-201ENST00000367178 TOP2BQ02880 1626 aa20.53■□□□□ 0.88
SCAF8-201ENST00000367178 CABP2Q9NPB3 220 aa20.53■□□□□ 0.88
SCAF8-201ENST00000367178 TTC5Q8N0Z6 440 aa20.52■□□□□ 0.88
SCAF8-201ENST00000367178 DEKP35659 375 aaKnown RBP20.52■□□□□ 0.88
SCAF8-201ENST00000367178 EIF2S2P20042 333 aaKnown RBP20.52■□□□□ 0.87
SCAF8-201ENST00000367178 DRC7Q8IY82 874 aa20.52■□□□□ 0.87
SCAF8-201ENST00000367178 GZF1Q9H116 711 aaPredicted RBP20.52■□□□□ 0.87
SCAF8-201ENST00000367178 HSP90B1P14625 803 aaKnown RBP20.51■□□□□ 0.87
SCAF8-201ENST00000367178 NOL8Q76FK4 1167 aaKnown RBP20.5■□□□□ 0.87
SCAF8-201ENST00000367178 CNTLNQ9NXG0 1405 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms