RNA–Protein interactions for RNA: ENST00000366732.5

MRPL55-206, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3 BASIC

Gene MRPL55, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-206ENST00000366732 ADGRL2O95490 1459 aa23.98■■□□□ 1.43
MRPL55-206ENST00000366732 CEBPAP49715 358 aaPredicted RBP23.97■■□□□ 1.43
MRPL55-206ENST00000366732 ROCK1Q13464 1354 aa23.95■■□□□ 1.42
MRPL55-206ENST00000366732 EIF2AK4Q9P2K8 1649 aaKnown RBP23.95■■□□□ 1.42
MRPL55-206ENST00000366732 ZMYM3Q14202 1370 aa23.94■■□□□ 1.42
MRPL55-206ENST00000366732 PTPRKQ15262 1439 aa23.93■■□□□ 1.42
MRPL55-206ENST00000366732 FAM135AQ9P2D6 1515 aa23.9■■□□□ 1.42
MRPL55-206ENST00000366732 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.89■■□□□ 1.41
MRPL55-206ENST00000366732 ANKRD50Q9ULJ7 1429 aa23.89■■□□□ 1.41
MRPL55-206ENST00000366732 KANK1Q14678 1352 aa23.89■■□□□ 1.41
MRPL55-206ENST00000366732 MROH2AA6NES4 1674 aa23.88■■□□□ 1.41
MRPL55-206ENST00000366732 CLTCQ00610 1675 aaKnown RBP23.88■■□□□ 1.41
MRPL55-206ENST00000366732 KDM5DQ9BY66 1539 aa23.88■■□□□ 1.41
MRPL55-206ENST00000366732 RNF17Q9BXT8 1623 aaKnown RBP23.88■■□□□ 1.41
MRPL55-206ENST00000366732 C3P01024 1663 aa23.85■■□□□ 1.41
MRPL55-206ENST00000366732 NPATQ14207 1427 aa23.82■■□□□ 1.4
MRPL55-206ENST00000366732 SETD1BQ9UPS6 1966 aaKnown RBP23.82■■□□□ 1.4
MRPL55-206ENST00000366732 UHRF1BP1Q6BDS2 1440 aa23.79■■□□□ 1.4
MRPL55-206ENST00000366732 ZC3H13Q5T200 1668 aaKnown RBP23.79■■□□□ 1.4
MRPL55-206ENST00000366732 ABCC3O15438 1527 aa23.79■■□□□ 1.4
MRPL55-206ENST00000366732 PRDM15P57071 1507 aaPredicted RBP23.79■■□□□ 1.4
MRPL55-206ENST00000366732 DEPDC5O75140 1603 aa23.77■■□□□ 1.4
MRPL55-206ENST00000366732 MROH1Q8NDA8 1641 aa23.77■■□□□ 1.4
MRPL55-206ENST00000366732 PZPP20742 1482 aa23.76■■□□□ 1.39
MRPL55-206ENST00000366732 LMTK3Q96Q04 1460 aa23.75■■□□□ 1.39
MRPL55-206ENST00000366732 PREX1Q8TCU6 1659 aa23.74■■□□□ 1.39
MRPL55-206ENST00000366732 FBXO31Q5XUX0 539 aaPredicted RBP23.74■■□□□ 1.39
MRPL55-206ENST00000366732 HFM1A2PYH4 1435 aa23.7■■□□□ 1.38
MRPL55-206ENST00000366732 NAIPQ13075 1403 aa23.7■■□□□ 1.38
MRPL55-206ENST00000366732 ARHGAP31Q2M1Z3 1444 aa23.7■■□□□ 1.38
MRPL55-206ENST00000366732 TNRQ92752 1358 aa23.7■■□□□ 1.38
MRPL55-206ENST00000366732 CEP152O94986 1710 aa23.7■■□□□ 1.38
MRPL55-206ENST00000366732 NUP155O75694 1391 aa23.69■■□□□ 1.38
MRPL55-206ENST00000366732 HSPA2P54652 639 aa23.69■■□□□ 1.38
MRPL55-206ENST00000366732 LMTK2Q8IWU2 1503 aa23.69■■□□□ 1.38
MRPL55-206ENST00000366732 CAMSAP1Q5T5Y3 1602 aa23.68■■□□□ 1.38
MRPL55-206ENST00000366732 VWDEQ8N2E2 1590 aa23.67■■□□□ 1.38
MRPL55-206ENST00000366732 UNC13BO14795 1591 aa23.65■■□□□ 1.38
MRPL55-206ENST00000366732 TRIM52Q96A61 297 aa23.63■■□□□ 1.37
MRPL55-206ENST00000366732 GCC2Q8IWJ2 1684 aa23.63■■□□□ 1.37
MRPL55-206ENST00000366732 ERVK-7P63135 1459 aa23.62■■□□□ 1.37
MRPL55-206ENST00000366732 ACIN1Q9UKV3 1341 aaKnown RBP23.61■■□□□ 1.37
MRPL55-206ENST00000366732 NLRP1Q9C000 1473 aa23.61■■□□□ 1.37
MRPL55-206ENST00000366732 SPATA31D1Q6ZQQ2 1576 aa23.61■■□□□ 1.37
MRPL55-206ENST00000366732 A2ML1A8K2U0 1454 aa23.6■■□□□ 1.37
MRPL55-206ENST00000366732 EFCAB6Q5THR3 1501 aa23.59■■□□□ 1.37
MRPL55-206ENST00000366732 MYO3AQ8NEV4 1616 aa23.59■■□□□ 1.37
MRPL55-206ENST00000366732 RPRD2Q5VT52 1461 aaKnown RBP23.59■■□□□ 1.37
MRPL55-206ENST00000366732 THEMISQ8N1K5 641 aaPredicted RBP23.58■■□□□ 1.37
MRPL55-206ENST00000366732 CEP170BQ9Y4F5 1589 aaPredicted RBP23.57■■□□□ 1.36
MRPL55-206ENST00000366732 CFAP65Q6ZU64 1925 aaKnown RBP23.57■■□□□ 1.36
MRPL55-206ENST00000366732 DMRT2Q9Y5R5 561 aa23.57■■□□□ 1.36
MRPL55-206ENST00000366732 IQGAP3Q86VI3 1631 aa23.57■■□□□ 1.36
MRPL55-206ENST00000366732 TET3O43151 1660 aa23.57■■□□□ 1.36
MRPL55-206ENST00000366732 SLC52A1Q9NWF4 448 aa23.55■■□□□ 1.36
MRPL55-206ENST00000366732 SETD5Q9C0A6 1442 aa23.54■■□□□ 1.36
MRPL55-206ENST00000366732 STAG3Q9UJ98 1225 aa23.54■■□□□ 1.36
MRPL55-206ENST00000366732 ZNF142P52746 1687 aaPredicted RBP23.54■■□□□ 1.36
MRPL55-206ENST00000366732 PKD2Q13563 968 aa23.51■■□□□ 1.35
MRPL55-206ENST00000366732 SLC4A1APQ9BWU0 796 aaKnown RBP23.51■■□□□ 1.35
MRPL55-206ENST00000366732 UGGT1Q9NYU2 1555 aa23.51■■□□□ 1.35
MRPL55-206ENST00000366732 NOS1P29475 1434 aa23.5■■□□□ 1.35
MRPL55-206ENST00000366732 IDI1Q13907 227 aa23.49■■□□□ 1.35
MRPL55-206ENST00000366732 PLA2R1Q13018 1463 aa23.48■■□□□ 1.35
MRPL55-206ENST00000366732 ANKLE2Q86XL3 938 aa23.47■■□□□ 1.35
MRPL55-206ENST00000366732 E9PCH4 1651 aa23.45■■□□□ 1.34
MRPL55-206ENST00000366732 NCKAP5LQ9HCH0 1330 aa23.45■■□□□ 1.34
MRPL55-206ENST00000366732 RAB3GAP2Q9H2M9 1393 aa23.43■■□□□ 1.34
MRPL55-206ENST00000366732 HRCP23327 699 aa23.43■■□□□ 1.34
MRPL55-206ENST00000366732 SYNMO15061 1565 aa23.42■■□□□ 1.34
MRPL55-206ENST00000366732 MPHOSPH9Q99550 1183 aa23.41■■□□□ 1.34
MRPL55-206ENST00000366732 EID1Q9Y6B2 187 aa23.41■■□□□ 1.34
MRPL55-206ENST00000366732 STRCQ7RTU9 1775 aa23.4■■□□□ 1.34
MRPL55-206ENST00000366732 CHGAP10645 457 aaKnown RBP23.4■■□□□ 1.34
MRPL55-206ENST00000366732 PTPRTO14522 1441 aa23.4■■□□□ 1.34
MRPL55-206ENST00000366732 ILDR1Q86SU0 546 aaPredicted RBP23.39■■□□□ 1.33
MRPL55-206ENST00000366732 PIK3C2BO00750 1634 aa23.38■■□□□ 1.33
MRPL55-206ENST00000366732 HDGFP51858 240 aaKnown RBP23.38■■□□□ 1.33
MRPL55-206ENST00000366732 UBR1Q8IWV7 1749 aa23.37■■□□□ 1.33
MRPL55-206ENST00000366732 TRIM26Q12899 539 aaPredicted RBP23.36■■□□□ 1.33
MRPL55-206ENST00000366732 TXNDC2Q86VQ3 553 aa23.36■■□□□ 1.33
MRPL55-206ENST00000366732 TMEM2Q9UHN6 1383 aa23.35■■□□□ 1.33
MRPL55-206ENST00000366732 KDM5AP29375 1690 aaKnown RBP23.35■■□□□ 1.33
MRPL55-206ENST00000366732 ADGRB3O60242 1522 aa23.33■■□□□ 1.33
MRPL55-206ENST00000366732 SPHKAPQ2M3C7 1700 aa23.33■■□□□ 1.32
MRPL55-206ENST00000366732 SLIT1O75093 1534 aa23.31■■□□□ 1.32
MRPL55-206ENST00000366732 FOXD1Q16676 465 aa23.3■■□□□ 1.32
MRPL55-206ENST00000366732 SCAF11Q99590 1463 aaKnown RBP23.3■■□□□ 1.32
MRPL55-206ENST00000366732 ARHGAP23Q9P227 1491 aa23.3■■□□□ 1.32
MRPL55-206ENST00000366732 NPHP4O75161 1426 aaPredicted RBP23.29■■□□□ 1.32
MRPL55-206ENST00000366732 POLR1AO95602 1720 aaPredicted RBP23.29■■□□□ 1.32
MRPL55-206ENST00000366732 LTKP29376 864 aa23.29■■□□□ 1.32
MRPL55-206ENST00000366732 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.29■■□□□ 1.32
MRPL55-206ENST00000366732 TRPM2O94759 1503 aa23.28■■□□□ 1.32
MRPL55-206ENST00000366732 PPP1R15AO75807 674 aaPredicted RBP23.28■■□□□ 1.32
MRPL55-206ENST00000366732 ZNF326Q5BKZ1 582 aaKnown RBP23.28■■□□□ 1.32
MRPL55-206ENST00000366732 MED14O60244 1454 aa23.28■■□□□ 1.32
MRPL55-206ENST00000366732 BCANQ96GW7 911 aa23.26■■□□□ 1.31
MRPL55-206ENST00000366732 TMEM131LA2VDJ0 1609 aa23.26■■□□□ 1.31
MRPL55-206ENST00000366732 FBXO41Q8TF61 875 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms