RNA–Protein interactions for RNA: ENST00000363858.1

RNU6-271P-201, Transcript of RNA, U6 small nuclear 271, pseudogene, humanhuman

BASIC

Gene RNU6-271P, Length 105 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-271P-201ENST00000363858 GPR37O15354 613 aa4.94□□□□□ -1.62
RNU6-271P-201ENST00000363858 KCNK17Q96T54 332 aa4.94□□□□□ -1.62
RNU6-271P-201ENST00000363858 EPAS1Q99814 870 aa4.94□□□□□ -1.62
RNU6-271P-201ENST00000363858 NPDC1Q9NQX5 325 aaPredicted RBP4.94□□□□□ -1.62
RNU6-271P-201ENST00000363858 C6orf132Q5T0Z8 1188 aa4.93□□□□□ -1.62
RNU6-271P-201ENST00000363858 RBM26Q5T8P6 1007 aaKnown RBP4.93□□□□□ -1.62
RNU6-271P-201ENST00000363858 FBXW7Q969H0 707 aa4.93□□□□□ -1.62
RNU6-271P-201ENST00000363858 C3orf80F5H4A9 247 aa4.92□□□□□ -1.62
RNU6-271P-201ENST00000363858 ARHGAP33O14559 1287 aa4.92□□□□□ -1.62
RNU6-271P-201ENST00000363858 PBX2P40425 430 aa4.92□□□□□ -1.62
RNU6-271P-201ENST00000363858 LSM11P83369 360 aaKnown RBP eCLIP4.92□□□□□ -1.62
RNU6-271P-201ENST00000363858 ZBED2Q9BTP6 218 aa4.92□□□□□ -1.62
RNU6-271P-201ENST00000363858 FAM198AQ9UFP1 575 aa4.92□□□□□ -1.62
RNU6-271P-201ENST00000363858 PPP1R3GB7ZBB8 358 aa4.9□□□□□ -1.63
RNU6-271P-201ENST00000363858 MAP3K7O43318 606 aa4.9□□□□□ -1.63
RNU6-271P-201ENST00000363858 PROX2Q3B8N5 592 aa4.9□□□□□ -1.63
RNU6-271P-201ENST00000363858 HRO43593 1189 aa4.89□□□□□ -1.63
RNU6-271P-201ENST00000363858 PTPREP23469 700 aa4.89□□□□□ -1.63
RNU6-271P-201ENST00000363858 PTGDRQ13258 359 aa4.89□□□□□ -1.63
RNU6-271P-201ENST00000363858 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.89□□□□□ -1.63
RNU6-271P-201ENST00000363858 TTC13Q8NBP0 860 aa4.89□□□□□ -1.63
RNU6-271P-201ENST00000363858 PCDH10Q9P2E7 1040 aa4.89□□□□□ -1.63
RNU6-271P-201ENST00000363858 VPS9D1Q9Y2B5 631 aa4.89□□□□□ -1.63
RNU6-271P-201ENST00000363858 ADGRD1Q6QNK2 874 aa4.88□□□□□ -1.63
RNU6-271P-201ENST00000363858 SPNS2Q8IVW8 549 aa4.88□□□□□ -1.63
RNU6-271P-201ENST00000363858 SLC4A5Q9BY07 1137 aa4.88□□□□□ -1.63
RNU6-271P-201ENST00000363858 TSKSQ9UJT2 592 aa4.88□□□□□ -1.63
RNU6-271P-201ENST00000363858 BHMG1C9JSJ3 638 aaPredicted RBP4.87□□□□□ -1.63
RNU6-271P-201ENST00000363858 FECHP22830 423 aa4.87□□□□□ -1.63
RNU6-271P-201ENST00000363858 ANKRD13DQ6ZTN6 518 aa4.87□□□□□ -1.63
RNU6-271P-201ENST00000363858 TK2O00142 265 aa4.86□□□□□ -1.63
RNU6-271P-201ENST00000363858 LMOD2Q6P5Q4 547 aa4.86□□□□□ -1.63
RNU6-271P-201ENST00000363858 PADI6Q6TGC4 694 aa4.86□□□□□ -1.63
RNU6-271P-201ENST00000363858 NUTM2FA1L443 756 aa4.85□□□□□ -1.63
RNU6-271P-201ENST00000363858 TRIM6-TRIM34B2RNG4 842 aa4.85□□□□□ -1.63
RNU6-271P-201ENST00000363858 PRSS12P56730 875 aa4.85□□□□□ -1.63
RNU6-271P-201ENST00000363858 CDCA7LQ96GN5 454 aa4.85□□□□□ -1.63
RNU6-271P-201ENST00000363858 FAM161AQ3B820 660 aa4.84□□□□□ -1.63
RNU6-271P-201ENST00000363858 KIAA1468Q9P260 1216 aa4.84□□□□□ -1.63
RNU6-271P-201ENST00000363858 SMAPO00193 183 aa4.83□□□□□ -1.64
RNU6-271P-201ENST00000363858 MMRN1Q13201 1228 aa4.83□□□□□ -1.64
RNU6-271P-201ENST00000363858 SMYD5Q6GMV2 418 aa4.83□□□□□ -1.64
RNU6-271P-201ENST00000363858 GPIHBP1Q8IV16 184 aa4.83□□□□□ -1.64
RNU6-271P-201ENST00000363858 RBM27Q9P2N5 1060 aaKnown RBP4.83□□□□□ -1.64
RNU6-271P-201ENST00000363858 ONECUT3O60422 494 aaPredicted RBP4.82□□□□□ -1.64
RNU6-271P-201ENST00000363858 FCHSD2O94868 740 aa4.82□□□□□ -1.64
RNU6-271P-201ENST00000363858 ZC3H15Q8WU90 426 aaKnown RBP4.82□□□□□ -1.64
RNU6-271P-201ENST00000363858 BCANQ96GW7 911 aa4.82□□□□□ -1.64
RNU6-271P-201ENST00000363858 SEPT9Q9UHD8 586 aaPredicted RBP4.82□□□□□ -1.64
RNU6-271P-201ENST00000363858 RABGEF1Q9UJ41 708 aa4.82□□□□□ -1.64
RNU6-271P-201ENST00000363858 ADGRG1Q9Y653 693 aa4.82□□□□□ -1.64
RNU6-271P-201ENST00000363858 HIC1Q14526 733 aa4.81□□□□□ -1.64
RNU6-271P-201ENST00000363858 CERKQ8TCT0 537 aa4.81□□□□□ -1.64
RNU6-271P-201ENST00000363858 PHOX2BQ99453 314 aa4.81□□□□□ -1.64
RNU6-271P-201ENST00000363858 EYA1Q99502 592 aa4.81□□□□□ -1.64
RNU6-271P-201ENST00000363858 GNPATO15228 680 aa4.8□□□□□ -1.64
RNU6-271P-201ENST00000363858 ZMYND10O75800 440 aa4.8□□□□□ -1.64
RNU6-271P-201ENST00000363858 NUDT18Q6ZVK8 323 aa4.8□□□□□ -1.64
RNU6-271P-201ENST00000363858 TATDN2Q93075 761 aa4.8□□□□□ -1.64
RNU6-271P-201ENST00000363858 KCNH8Q96L42 1107 aa4.8□□□□□ -1.64
RNU6-271P-201ENST00000363858 NLRP7Q8WX94 980 aa4.79□□□□□ -1.64
RNU6-271P-201ENST00000363858 MYT1LQ9UL68 1186 aa4.79□□□□□ -1.64
RNU6-271P-201ENST00000363858 BARGINQ6ZT62 677 aa4.78□□□□□ -1.64
RNU6-271P-201ENST00000363858 PNMA3Q9UL41 463 aa4.78□□□□□ -1.64
RNU6-271P-201ENST00000363858 MAP2K5Q13163 448 aa4.77□□□□□ -1.65
RNU6-271P-201ENST00000363858 METTL3Q86U44 580 aaKnown RBP4.77□□□□□ -1.65
RNU6-271P-201ENST00000363858 PACS2Q86VP3 889 aa4.77□□□□□ -1.65
RNU6-271P-201ENST00000363858 PXYLP1Q8TE99 480 aa4.77□□□□□ -1.65
RNU6-271P-201ENST00000363858 RNF166Q96A37 237 aaPredicted RBP4.77□□□□□ -1.65
RNU6-271P-201ENST00000363858 NBPF26B4DH59 902 aa4.76□□□□□ -1.65
RNU6-271P-201ENST00000363858 BCAMP50895 628 aa4.76□□□□□ -1.65
RNU6-271P-201ENST00000363858 FAM98CQ17RN3 349 aaKnown RBP4.76□□□□□ -1.65
RNU6-271P-201ENST00000363858 LAPTM4BQ86VI4 370 aa4.76□□□□□ -1.65
RNU6-271P-201ENST00000363858 MRPL50Q8N5N7 158 aaKnown RBP4.76□□□□□ -1.65
RNU6-271P-201ENST00000363858 CCDC102AQ96A19 550 aa4.76□□□□□ -1.65
RNU6-271P-201ENST00000363858 ZFRQ96KR1 1074 aaKnown RBP4.76□□□□□ -1.65
RNU6-271P-201ENST00000363858 NBPF3Q9H094 633 aa4.76□□□□□ -1.65
RNU6-271P-201ENST00000363858 IRF6O14896 467 aa4.75□□□□□ -1.65
RNU6-271P-201ENST00000363858 THSD4Q6ZMP0 1018 aa4.75□□□□□ -1.65
RNU6-271P-201ENST00000363858 SAMD7Q7Z3H4 446 aa4.75□□□□□ -1.65
RNU6-271P-201ENST00000363858 KCTD12Q96CX2 325 aaKnown RBP4.75□□□□□ -1.65
RNU6-271P-201ENST00000363858 PLSCR2Q9NRY7 297 aa4.75□□□□□ -1.65
RNU6-271P-201ENST00000363858 RCCD1A6NED2 376 aa4.74□□□□□ -1.65
RNU6-271P-201ENST00000363858 TULP1O00294 542 aaPredicted RBP4.74□□□□□ -1.65
RNU6-271P-201ENST00000363858 SWT1Q5T5J6 900 aaKnown RBP4.74□□□□□ -1.65
RNU6-271P-201ENST00000363858 WNT2BQ93097 391 aa4.74□□□□□ -1.65
RNU6-271P-201ENST00000363858 REPIN1Q9BWE0 567 aaKnown RBP4.74□□□□□ -1.65
RNU6-271P-201ENST00000363858 TMEM134Q9H6X4 195 aa4.74□□□□□ -1.65
RNU6-271P-201ENST00000363858 MINK1Q8N4C8 1332 aaPredicted RBP4.73□□□□□ -1.65
RNU6-271P-201ENST00000363858 SOWAHBA6NEL2 793 aa4.73□□□□□ -1.65
RNU6-271P-201ENST00000363858 TMUB1Q9BVT8 246 aa4.73□□□□□ -1.65
RNU6-271P-201ENST00000363858 PRKCSHP14314 528 aaPredicted RBP4.72□□□□□ -1.65
RNU6-271P-201ENST00000363858 RBM46Q8TBY0 533 aaKnown RBP4.72□□□□□ -1.65
RNU6-271P-201ENST00000363858 SLC24A3Q9HC58 644 aa4.72□□□□□ -1.65
RNU6-271P-201ENST00000363858 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.71□□□□□ -1.66
RNU6-271P-201ENST00000363858 OATP04181 439 aa4.71□□□□□ -1.66
RNU6-271P-201ENST00000363858 SLC10A3P09131 477 aa4.71□□□□□ -1.66
RNU6-271P-201ENST00000363858 DNAJB2P25686 324 aa4.71□□□□□ -1.66
RNU6-271P-201ENST00000363858 ANKK1Q8NFD2 765 aa4.71□□□□□ -1.66
RNU6-271P-201ENST00000363858 WBP1LQ9NX94 342 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms