RNA–Protein interactions for RNA: ENST00000362942.1

RNU6-428P-201, Transcript of RNA, U6 small nuclear 428, pseudogene, humanhuman

BASIC

Gene RNU6-428P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-428P-201ENST00000362942 PBX2P40425 430 aa6.13□□□□□ -1.43
RNU6-428P-201ENST00000362942 MARVELD3Q96A59 401 aa6.13□□□□□ -1.43
RNU6-428P-201ENST00000362942 TPRNQ4KMQ1 711 aa6.12□□□□□ -1.43
RNU6-428P-201ENST00000362942 C6orf132Q5T0Z8 1188 aa6.12□□□□□ -1.43
RNU6-428P-201ENST00000362942 HIC1Q14526 733 aa6.11□□□□□ -1.43
RNU6-428P-201ENST00000362942 ZNF687Q8N1G0 1237 aa6.11□□□□□ -1.43
RNU6-428P-201ENST00000362942 ADAM33Q9BZ11 813 aa6.11□□□□□ -1.43
RNU6-428P-201ENST00000362942 PPP1R3GB7ZBB8 358 aa6.1□□□□□ -1.43
RNU6-428P-201ENST00000362942 ZC3H15Q8WU90 426 aaKnown RBP6.1□□□□□ -1.43
RNU6-428P-201ENST00000362942 HS3ST6Q96QI5 342 aa6.1□□□□□ -1.43
RNU6-428P-201ENST00000362942 ARHGAP33O14559 1287 aa6.09□□□□□ -1.43
RNU6-428P-201ENST00000362942 PTGDRQ13258 359 aa6.09□□□□□ -1.43
RNU6-428P-201ENST00000362942 RBM27Q9P2N5 1060 aaKnown RBP6.09□□□□□ -1.43
RNU6-428P-201ENST00000362942 GNPATO15228 680 aa6.08□□□□□ -1.44
RNU6-428P-201ENST00000362942 TSR1Q2NL82 804 aaKnown RBP6.08□□□□□ -1.44
RNU6-428P-201ENST00000362942 KRI1Q8N9T8 703 aaKnown RBP6.08□□□□□ -1.44
RNU6-428P-201ENST00000362942 KCNK17Q96T54 332 aa6.08□□□□□ -1.44
RNU6-428P-201ENST00000362942 ONECUT3O60422 494 aaPredicted RBP6.07□□□□□ -1.44
RNU6-428P-201ENST00000362942 ZMYND10O75800 440 aa6.07□□□□□ -1.44
RNU6-428P-201ENST00000362942 PRIM1P49642 420 aaKnown RBP6.07□□□□□ -1.44
RNU6-428P-201ENST00000362942 BARGINQ6ZT62 677 aa6.06□□□□□ -1.44
RNU6-428P-201ENST00000362942 CDHR5Q9HBB8 845 aa6.06□□□□□ -1.44
RNU6-428P-201ENST00000362942 MINK1Q8N4C8 1332 aaPredicted RBP6.05□□□□□ -1.44
RNU6-428P-201ENST00000362942 PRSS12P56730 875 aa6.05□□□□□ -1.44
RNU6-428P-201ENST00000362942 MAP2K5Q13163 448 aa6.05□□□□□ -1.44
RNU6-428P-201ENST00000362942 PACS2Q86VP3 889 aa6.05□□□□□ -1.44
RNU6-428P-201ENST00000362942 CDAN1Q8IWY9 1227 aa6.05□□□□□ -1.44
RNU6-428P-201ENST00000362942 GPR37O15354 613 aa6.04□□□□□ -1.44
RNU6-428P-201ENST00000362942 CDCA7LQ96GN5 454 aa6.04□□□□□ -1.44
RNU6-428P-201ENST00000362942 SLC4A5Q9BY07 1137 aa6.04□□□□□ -1.44
RNU6-428P-201ENST00000362942 NPDC1Q9NQX5 325 aaPredicted RBP6.04□□□□□ -1.44
RNU6-428P-201ENST00000362942 TRIM6-TRIM34B2RNG4 842 aa6.03□□□□□ -1.44
RNU6-428P-201ENST00000362942 NBPF26B4DH59 902 aa6.03□□□□□ -1.44
RNU6-428P-201ENST00000362942 OATP04181 439 aa6.03□□□□□ -1.44
RNU6-428P-201ENST00000362942 COL9A1P20849 921 aa6.03□□□□□ -1.44
RNU6-428P-201ENST00000362942 PSEN2P49810 448 aa6.03□□□□□ -1.44
RNU6-428P-201ENST00000362942 STAC3Q96MF2 364 aa6.03□□□□□ -1.44
RNU6-428P-201ENST00000362942 TK2O00142 265 aa6.02□□□□□ -1.45
RNU6-428P-201ENST00000362942 PADI6Q6TGC4 694 aa6.02□□□□□ -1.45
RNU6-428P-201ENST00000362942 RBM46Q8TBY0 533 aaKnown RBP6.02□□□□□ -1.45
RNU6-428P-201ENST00000362942 AK7Q96M32 723 aa6.02□□□□□ -1.45
RNU6-428P-201ENST00000362942 ZBED2Q9BTP6 218 aa6.02□□□□□ -1.45
RNU6-428P-201ENST00000362942 NBPF3Q9H094 633 aa6.02□□□□□ -1.45
RNU6-428P-201ENST00000362942 IRF6O14896 467 aa6.01□□□□□ -1.45
RNU6-428P-201ENST00000362942 LSM11P83369 360 aaKnown RBP eCLIP6.01□□□□□ -1.45
RNU6-428P-201ENST00000362942 RABGEF1Q9UJ41 708 aa6.01□□□□□ -1.45
RNU6-428P-201ENST00000362942 AXIN2Q9Y2T1 843 aa6.01□□□□□ -1.45
RNU6-428P-201ENST00000362942 MMRN1Q13201 1228 aa6□□□□□ -1.45
RNU6-428P-201ENST00000362942 TTC13Q8NBP0 860 aa6□□□□□ -1.45
RNU6-428P-201ENST00000362942 SLC24A3Q9HC58 644 aa6□□□□□ -1.45
RNU6-428P-201ENST00000362942 POTEB3A0JP26 581 aa5.99□□□□□ -1.45
RNU6-428P-201ENST00000362942 PRKCSHP14314 528 aaPredicted RBP5.99□□□□□ -1.45
RNU6-428P-201ENST00000362942 HDGFP51858 240 aaKnown RBP5.99□□□□□ -1.45
RNU6-428P-201ENST00000362942 DMRTA1Q5VZB9 504 aa5.99□□□□□ -1.45
RNU6-428P-201ENST00000362942 POTEBQ6S5H4 581 aa5.99□□□□□ -1.45
RNU6-428P-201ENST00000362942 POTEEQ6S8J3 1075 aa5.99□□□□□ -1.45
RNU6-428P-201ENST00000362942 PNMA3Q9UL41 463 aa5.99□□□□□ -1.45
RNU6-428P-201ENST00000362942 VPS9D1Q9Y2B5 631 aa5.99□□□□□ -1.45
RNU6-428P-201ENST00000362942 SLC4A3P48751 1232 aa5.98□□□□□ -1.45
RNU6-428P-201ENST00000362942 PROX2Q3B8N5 592 aa5.98□□□□□ -1.45
RNU6-428P-201ENST00000362942 ADGRD1Q6QNK2 874 aa5.98□□□□□ -1.45
RNU6-428P-201ENST00000362942 ANKRD13DQ6ZTN6 518 aa5.98□□□□□ -1.45
RNU6-428P-201ENST00000362942 TATDN2Q93075 761 aa5.98□□□□□ -1.45
RNU6-428P-201ENST00000362942 CCDC102AQ96A19 550 aa5.98□□□□□ -1.45
RNU6-428P-201ENST00000362942 KIAA1468Q9P260 1216 aa5.98□□□□□ -1.45
RNU6-428P-201ENST00000362942 TSKSQ9UJT2 592 aa5.98□□□□□ -1.45
RNU6-428P-201ENST00000362942 FECHP22830 423 aa5.97□□□□□ -1.45
RNU6-428P-201ENST00000362942 NUDT18Q6ZVK8 323 aa5.97□□□□□ -1.45
RNU6-428P-201ENST00000362942 LAPTM4BQ86VI4 370 aa5.97□□□□□ -1.45
RNU6-428P-201ENST00000362942 MRPL50Q8N5N7 158 aaKnown RBP5.97□□□□□ -1.45
RNU6-428P-201ENST00000362942 ADGRG1Q9Y653 693 aa5.97□□□□□ -1.45
RNU6-428P-201ENST00000362942 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.96□□□□□ -1.46
RNU6-428P-201ENST00000362942 GOLGA8CPA6NN73 597 aa5.96□□□□□ -1.46
RNU6-428P-201ENST00000362942 DAXXQ9UER7 740 aaPredicted RBP5.96□□□□□ -1.46
RNU6-428P-201ENST00000362942 DNAJB2P25686 324 aa5.95□□□□□ -1.46
RNU6-428P-201ENST00000362942 FAM98CQ17RN3 349 aaKnown RBP5.95□□□□□ -1.46
RNU6-428P-201ENST00000362942 METTL3Q86U44 580 aaKnown RBP5.95□□□□□ -1.46
RNU6-428P-201ENST00000362942 PXYLP1Q8TE99 480 aa5.95□□□□□ -1.46
RNU6-428P-201ENST00000362942 NECTIN2Q92692 538 aa5.95□□□□□ -1.46
RNU6-428P-201ENST00000362942 TRIM66O15016 1216 aa5.94□□□□□ -1.46
RNU6-428P-201ENST00000362942 CLCN1P35523 988 aa5.94□□□□□ -1.46
RNU6-428P-201ENST00000362942 AMHR2Q16671 573 aa5.94□□□□□ -1.46
RNU6-428P-201ENST00000362942 RSPH4AQ5TD94 716 aa5.94□□□□□ -1.46
RNU6-428P-201ENST00000362942 FAM198AQ9UFP1 575 aa5.94□□□□□ -1.46
RNU6-428P-201ENST00000362942 BHMG1C9JSJ3 638 aaPredicted RBP5.93□□□□□ -1.46
RNU6-428P-201ENST00000362942 TTLL12Q14166 644 aaPredicted RBP5.93□□□□□ -1.46
RNU6-428P-201ENST00000362942 EYA1Q99502 592 aa5.93□□□□□ -1.46
RNU6-428P-201ENST00000362942 RCCD1A6NED2 376 aa5.92□□□□□ -1.46
RNU6-428P-201ENST00000362942 HRO43593 1189 aa5.92□□□□□ -1.46
RNU6-428P-201ENST00000362942 PDE4DQ08499 809 aa5.92□□□□□ -1.46
RNU6-428P-201ENST00000362942 SPNS2Q8IVW8 549 aa5.92□□□□□ -1.46
RNU6-428P-201ENST00000362942 SULF1Q8IWU6 871 aa5.92□□□□□ -1.46
RNU6-428P-201ENST00000362942 KRTAP3-3Q9BYR6 98 aa5.92□□□□□ -1.46
RNU6-428P-201ENST00000362942 KRTAP3-2Q9BYR7 98 aa5.92□□□□□ -1.46
RNU6-428P-201ENST00000362942 GPCPD1Q9NPB8 672 aa5.92□□□□□ -1.46
RNU6-428P-201ENST00000362942 SMAPO00193 183 aa5.91□□□□□ -1.46
RNU6-428P-201ENST00000362942 NEUROD2Q15784 382 aa5.91□□□□□ -1.46
RNU6-428P-201ENST00000362942 FAM161AQ3B820 660 aa5.91□□□□□ -1.46
RNU6-428P-201ENST00000362942 SLF2Q8IX21 1173 aa5.91□□□□□ -1.46
RNU6-428P-201ENST00000362942 ANKK1Q8NFD2 765 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms