RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 TCOF1Q13428 1488 aaKnown RBP12.35□□□□□ -0.43
CALD1-202ENST00000361901 NBPF1Q3BBV0 1214 aa12.35□□□□□ -0.43
CALD1-202ENST00000361901 WASHC2AQ641Q2 1341 aa12.35□□□□□ -0.43
CALD1-202ENST00000361901 STK26Q9P289 416 aa12.34□□□□□ -0.43
CALD1-202ENST00000361901 LRRIQ1Q96JM4 1722 aa12.34□□□□□ -0.43
CALD1-202ENST00000361901 USP47Q96K76 1375 aa12.34□□□□□ -0.43
CALD1-202ENST00000361901 PLEKHH2Q8IVE3 1493 aa12.33□□□□□ -0.44
CALD1-202ENST00000361901 SYCP2Q9BX26 1530 aa12.32□□□□□ -0.44
CALD1-202ENST00000361901 C11orf95C9JLR9 678 aaPredicted RBP12.32□□□□□ -0.44
CALD1-202ENST00000361901 ASXL2Q76L83 1435 aa12.32□□□□□ -0.44
CALD1-202ENST00000361901 CD109Q6YHK3 1445 aa12.31□□□□□ -0.44
CALD1-202ENST00000361901 TRAPPC8Q9Y2L5 1435 aa12.31□□□□□ -0.44
CALD1-202ENST00000361901 ABCC2Q92887 1545 aa12.31□□□□□ -0.44
CALD1-202ENST00000361901 ABCA8O94911 1581 aa12.31□□□□□ -0.44
CALD1-202ENST00000361901 KDM6BO15054 1643 aa12.3□□□□□ -0.44
CALD1-202ENST00000361901 TNNT2P45379 298 aaPredicted RBP12.3□□□□□ -0.44
CALD1-202ENST00000361901 KIF7Q2M1P5 1343 aa12.3□□□□□ -0.44
CALD1-202ENST00000361901 TMF1P82094 1093 aa12.3□□□□□ -0.44
CALD1-202ENST00000361901 FANCAO15360 1455 aa12.29□□□□□ -0.44
CALD1-202ENST00000361901 PLCH2O75038 1416 aa12.29□□□□□ -0.44
CALD1-202ENST00000361901 TRAK1Q9UPV9 953 aa12.29□□□□□ -0.44
CALD1-202ENST00000361901 ADGRL1O94910 1474 aa12.28□□□□□ -0.44
CALD1-202ENST00000361901 PLEKHG5O94827 1062 aa12.28□□□□□ -0.44
CALD1-202ENST00000361901 KNSTRNQ9Y448 316 aa12.28□□□□□ -0.44
CALD1-202ENST00000361901 ITSN2Q9NZM3 1697 aa12.27□□□□□ -0.44
CALD1-202ENST00000361901 CCER2I3L3R5 266 aa12.26□□□□□ -0.45
CALD1-202ENST00000361901 DNMT1P26358 1616 aaKnown RBP12.26□□□□□ -0.45
CALD1-202ENST00000361901 ABCC10Q5T3U5 1492 aa12.25□□□□□ -0.45
CALD1-202ENST00000361901 CCDC7Q96M83 1385 aa12.25□□□□□ -0.45
CALD1-202ENST00000361901 CFAP70Q5T0N1 1121 aa12.25□□□□□ -0.45
CALD1-202ENST00000361901 WDR7Q9Y4E6 1490 aa12.25□□□□□ -0.45
CALD1-202ENST00000361901 TMEM132EQ6IEE7 984 aa12.25□□□□□ -0.45
CALD1-202ENST00000361901 POGKQ9P215 609 aa12.25□□□□□ -0.45
CALD1-202ENST00000361901 PRKRIP1Q9H875 184 aaPredicted RBP12.24□□□□□ -0.45
CALD1-202ENST00000361901 RPRD2Q5VT52 1461 aaKnown RBP12.24□□□□□ -0.45
CALD1-202ENST00000361901 IL27Q8NEV9 243 aa12.23□□□□□ -0.45
CALD1-202ENST00000361901 CCDC184Q52MB2 194 aa12.22□□□□□ -0.45
CALD1-202ENST00000361901 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.22□□□□□ -0.45
CALD1-202ENST00000361901 PANK3Q9H999 370 aa12.22□□□□□ -0.45
CALD1-202ENST00000361901 PZPP20742 1482 aa12.21□□□□□ -0.45
CALD1-202ENST00000361901 WDR43Q15061 677 aaKnown RBP eCLIP12.21□□□□□ -0.46
CALD1-202ENST00000361901 CDCA8Q53HL2 280 aa12.2□□□□□ -0.46
CALD1-202ENST00000361901 MBD5Q9P267 1494 aa12.2□□□□□ -0.46
CALD1-202ENST00000361901 MSH5O43196 834 aa12.2□□□□□ -0.46
CALD1-202ENST00000361901 SRPK2P78362 688 aaKnown RBP12.2□□□□□ -0.46
CALD1-202ENST00000361901 ANP32AP39687 249 aaKnown RBP12.19□□□□□ -0.46
CALD1-202ENST00000361901 VSIG10Q8N0Z9 540 aa12.19□□□□□ -0.46
CALD1-202ENST00000361901 TTC37Q6PGP7 1564 aa12.19□□□□□ -0.46
CALD1-202ENST00000361901 DAXXQ9UER7 740 aaPredicted RBP12.19□□□□□ -0.46
CALD1-202ENST00000361901 NOP58Q9Y2X3 529 aaKnown RBP12.18□□□□□ -0.46
CALD1-202ENST00000361901 PPM1GO15355 546 aaPredicted RBP12.17□□□□□ -0.46
CALD1-202ENST00000361901 NEUROD2Q15784 382 aa12.17□□□□□ -0.46
CALD1-202ENST00000361901 FBXO31Q5XUX0 539 aaPredicted RBP12.16□□□□□ -0.46
CALD1-202ENST00000361901 NUTM2FA1L443 756 aa12.16□□□□□ -0.46
CALD1-202ENST00000361901 ZBTB47Q9UFB7 747 aaPredicted RBP12.16□□□□□ -0.46
CALD1-202ENST00000361901 SAMD9LQ8IVG5 1584 aa12.16□□□□□ -0.46
CALD1-202ENST00000361901 KDM5BQ9UGL1 1544 aa12.15□□□□□ -0.46
CALD1-202ENST00000361901 DHX29Q7Z478 1369 aaKnown RBP12.15□□□□□ -0.46
CALD1-202ENST00000361901 CDC42BPAQ5VT25 1732 aa12.14□□□□□ -0.47
CALD1-202ENST00000361901 FAM135AQ9P2D6 1515 aa12.14□□□□□ -0.47
CALD1-202ENST00000361901 ZCCHC11Q5TAX3 1644 aaKnown RBP12.14□□□□□ -0.47
CALD1-202ENST00000361901 A0A0U1RQG5 324 aaPredicted RBP12.14□□□□□ -0.47
CALD1-202ENST00000361901 ADGRL2O95490 1459 aa12.14□□□□□ -0.47
CALD1-202ENST00000361901 CNTLNQ9NXG0 1405 aa12.14□□□□□ -0.47
CALD1-202ENST00000361901 ARHGEF12Q9NZN5 1544 aa12.14□□□□□ -0.47
CALD1-202ENST00000361901 KTN1Q86UP2 1357 aaKnown RBP12.14□□□□□ -0.47
CALD1-202ENST00000361901 VGFO15240 615 aaPredicted RBP12.13□□□□□ -0.47
CALD1-202ENST00000361901 ADGRF5Q8IZF2 1346 aa12.13□□□□□ -0.47
CALD1-202ENST00000361901 CFAP65Q6ZU64 1925 aaKnown RBP12.12□□□□□ -0.47
CALD1-202ENST00000361901 MINK1Q8N4C8 1332 aaPredicted RBP12.12□□□□□ -0.47
CALD1-202ENST00000361901 SHANK2Q9UPX8 1470 aa12.12□□□□□ -0.47
CALD1-202ENST00000361901 GCC2Q8IWJ2 1684 aa12.12□□□□□ -0.47
CALD1-202ENST00000361901 ERBINQ96RT1 1412 aa12.12□□□□□ -0.47
CALD1-202ENST00000361901 FANCIQ9NVI1 1328 aa12.11□□□□□ -0.47
CALD1-202ENST00000361901 DENND4BO75064 1496 aaPredicted RBP12.11□□□□□ -0.47
CALD1-202ENST00000361901 SOX12O15370 315 aa12.11□□□□□ -0.47
CALD1-202ENST00000361901 DUOX2Q9NRD8 1548 aa12.1□□□□□ -0.47
CALD1-202ENST00000361901 IDI1Q13907 227 aa12.1□□□□□ -0.47
CALD1-202ENST00000361901 CLASP1Q7Z460 1538 aa12.1□□□□□ -0.47
CALD1-202ENST00000361901 NEFMP07197 916 aa12.1□□□□□ -0.47
CALD1-202ENST00000361901 NPM2Q86SE8 214 aaKnown RBP12.09□□□□□ -0.47
CALD1-202ENST00000361901 MORC1Q86VD1 984 aa12.09□□□□□ -0.47
CALD1-202ENST00000361901 UHRF1BP1LA0JNW5 1464 aa12.09□□□□□ -0.47
CALD1-202ENST00000361901 MYO5CQ9NQX4 1742 aa12.09□□□□□ -0.47
CALD1-202ENST00000361901 RALBP1Q15311 655 aa12.09□□□□□ -0.47
CALD1-202ENST00000361901 EIF3AQ14152 1382 aaKnown RBP12.08□□□□□ -0.48
CALD1-202ENST00000361901 C14orf37Q86TY3 774 aa12.08□□□□□ -0.48
CALD1-202ENST00000361901 NLRP13Q86W25 1043 aa12.07□□□□□ -0.48
CALD1-202ENST00000361901 CCDC146Q8IYE0 955 aa12.07□□□□□ -0.48
CALD1-202ENST00000361901 CABP2Q9NPB3 220 aa12.07□□□□□ -0.48
CALD1-202ENST00000361901 CENPJQ9HC77 1338 aaPredicted RBP12.07□□□□□ -0.48
CALD1-202ENST00000361901 A2MP01023 1474 aa12.07□□□□□ -0.48
CALD1-202ENST00000361901 CEBPAP49715 358 aaPredicted RBP12.07□□□□□ -0.48
CALD1-202ENST00000361901 ZNF518AQ6AHZ1 1483 aa12.07□□□□□ -0.48
CALD1-202ENST00000361901 PREX2Q70Z35 1606 aa12.07□□□□□ -0.48
CALD1-202ENST00000361901 CANXP27824 592 aaKnown RBP12.06□□□□□ -0.48
CALD1-202ENST00000361901 TEX14Q8IWB6 1497 aa12.06□□□□□ -0.48
CALD1-202ENST00000361901 U2SURPO15042 1029 aaKnown RBP12.06□□□□□ -0.48
CALD1-202ENST00000361901 CDC42BPBQ9Y5S2 1711 aa12.06□□□□□ -0.48
CALD1-202ENST00000361901 MYBBP1AQ9BQG0 1328 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 255.5 ms