RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 RAPGEF3O95398 923 aa17.92■□□□□ 0.46
CTR9-201ENST00000361367 CHMP4BQ9H444 224 aaKnown RBP17.92■□□□□ 0.46
CTR9-201ENST00000361367 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.92■□□□□ 0.46
CTR9-201ENST00000361367 PLB1Q6P1J6 1458 aa17.9■□□□□ 0.46
CTR9-201ENST00000361367 PPP4R2Q9NY27 417 aa17.89■□□□□ 0.45
CTR9-201ENST00000361367 AMPHP49418 695 aa17.88■□□□□ 0.45
CTR9-201ENST00000361367 CALD1Q05682 793 aaKnown RBP17.87■□□□□ 0.45
CTR9-201ENST00000361367 BIVM-ERCC5R4GMW8 1640 aa17.86■□□□□ 0.45
CTR9-201ENST00000361367 NPHP1O15259 732 aa17.85■□□□□ 0.45
CTR9-201ENST00000361367 CENPJQ9HC77 1338 aaPredicted RBP17.85■□□□□ 0.45
CTR9-201ENST00000361367 CGNL1Q0VF96 1302 aa17.84■□□□□ 0.45
CTR9-201ENST00000361367 RGS3P49796 1198 aa17.83■□□□□ 0.45
CTR9-201ENST00000361367 LTV1Q96GA3 475 aaPredicted RBP17.83■□□□□ 0.45
CTR9-201ENST00000361367 MYBBP1AQ9BQG0 1328 aaKnown RBP17.82■□□□□ 0.44
CTR9-201ENST00000361367 CCDC146Q8IYE0 955 aa17.82■□□□□ 0.44
CTR9-201ENST00000361367 HFM1A2PYH4 1435 aa17.82■□□□□ 0.44
CTR9-201ENST00000361367 DAPK1P53355 1430 aa17.82■□□□□ 0.44
CTR9-201ENST00000361367 COG3Q96JB2 828 aa17.82■□□□□ 0.44
CTR9-201ENST00000361367 ARHGEF11O15085 1522 aa17.82■□□□□ 0.44
CTR9-201ENST00000361367 TMEM132EQ6IEE7 984 aa17.81■□□□□ 0.44
CTR9-201ENST00000361367 OS9Q13438 667 aaPredicted RBP17.81■□□□□ 0.44
CTR9-201ENST00000361367 PRKRIP1Q9H875 184 aaPredicted RBP17.81■□□□□ 0.44
CTR9-201ENST00000361367 SUPT6HQ7KZ85 1726 aaKnown RBP17.81■□□□□ 0.44
CTR9-201ENST00000361367 PCF11O94913 1555 aaKnown RBP17.8■□□□□ 0.44
CTR9-201ENST00000361367 B4GALNT3Q6L9W6 998 aa17.8■□□□□ 0.44
CTR9-201ENST00000361367 IPO8O15397 1037 aaKnown RBP17.79■□□□□ 0.44
CTR9-201ENST00000361367 CCDC9Q9Y3X0 531 aaKnown RBP17.79■□□□□ 0.44
CTR9-201ENST00000361367 CFAP70Q5T0N1 1121 aa17.79■□□□□ 0.44
CTR9-201ENST00000361367 RCAN3Q9UKA8 241 aa17.79■□□□□ 0.44
CTR9-201ENST00000361367 CD109Q6YHK3 1445 aa17.78■□□□□ 0.44
CTR9-201ENST00000361367 GOLGA2Q08379 1002 aa17.78■□□□□ 0.44
CTR9-201ENST00000361367 CASC1Q6TDU7 716 aa17.77■□□□□ 0.44
CTR9-201ENST00000361367 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.77■□□□□ 0.44
CTR9-201ENST00000361367 KIAA1107Q9UPP5 1409 aa17.77■□□□□ 0.43
CTR9-201ENST00000361367 TXNDC2Q86VQ3 553 aa17.76■□□□□ 0.43
CTR9-201ENST00000361367 SLC52A1Q9NWF4 448 aa17.75■□□□□ 0.43
CTR9-201ENST00000361367 LMOD3Q0VAK6 560 aa17.74■□□□□ 0.43
CTR9-201ENST00000361367 BECN1Q14457 450 aa17.74■□□□□ 0.43
CTR9-201ENST00000361367 CHMP4AQ9BY43 222 aa17.73■□□□□ 0.43
CTR9-201ENST00000361367 KIF7Q2M1P5 1343 aa17.73■□□□□ 0.43
CTR9-201ENST00000361367 ZNF330Q9Y3S2 320 aaPredicted RBP17.72■□□□□ 0.43
CTR9-201ENST00000361367 CCDC141Q6ZP82 1450 aa17.72■□□□□ 0.43
CTR9-201ENST00000361367 PSME1Q06323 249 aa17.72■□□□□ 0.43
CTR9-201ENST00000361367 STK31Q9BXU1 1019 aa17.72■□□□□ 0.43
CTR9-201ENST00000361367 RRP7AQ9Y3A4 280 aaKnown RBP17.71■□□□□ 0.43
CTR9-201ENST00000361367 PDE3BQ13370 1112 aa17.71■□□□□ 0.43
CTR9-201ENST00000361367 CCDC7Q96M83 1385 aa17.71■□□□□ 0.43
CTR9-201ENST00000361367 EIF5BO60841 1220 aaKnown RBP17.71■□□□□ 0.42
CTR9-201ENST00000361367 ROCK1Q13464 1354 aa17.7■□□□□ 0.42
CTR9-201ENST00000361367 THEMISQ8N1K5 641 aaPredicted RBP17.7■□□□□ 0.42
CTR9-201ENST00000361367 NBPF1Q3BBV0 1214 aa17.7■□□□□ 0.42
CTR9-201ENST00000361367 ANP32BQ92688 251 aaKnown RBP17.7■□□□□ 0.42
CTR9-201ENST00000361367 DDRGK1Q96HY6 314 aa17.7■□□□□ 0.42
CTR9-201ENST00000361367 NAIPQ13075 1403 aa17.7■□□□□ 0.42
CTR9-201ENST00000361367 CABP2Q9NPB3 220 aa17.69■□□□□ 0.42
CTR9-201ENST00000361367 SMC4Q9NTJ3 1288 aa17.69■□□□□ 0.42
CTR9-201ENST00000361367 MAP3K1Q13233 1512 aa17.67■□□□□ 0.42
CTR9-201ENST00000361367 CAMSAP2Q08AD1 1489 aa17.67■□□□□ 0.42
CTR9-201ENST00000361367 ATF3P18847 181 aa17.67■□□□□ 0.42
CTR9-201ENST00000361367 ITPRIPQ8IWB1 547 aa17.67■□□□□ 0.42
CTR9-201ENST00000361367 ADGRL1O94910 1474 aa17.67■□□□□ 0.42
CTR9-201ENST00000361367 POGZQ7Z3K3 1410 aa17.66■□□□□ 0.42
CTR9-201ENST00000361367 KIF14Q15058 1648 aa17.66■□□□□ 0.42
CTR9-201ENST00000361367 ABCC5O15440 1437 aa17.65■□□□□ 0.42
CTR9-201ENST00000361367 NBPF8Q3BBV2 869 aa17.65■□□□□ 0.42
CTR9-201ENST00000361367 DIAPH1O60610 1272 aaKnown RBP17.64■□□□□ 0.42
CTR9-201ENST00000361367 NBR1Q14596 966 aa17.64■□□□□ 0.41
CTR9-201ENST00000361367 AEBP2Q6ZN18 517 aaPredicted RBP17.63■□□□□ 0.41
CTR9-201ENST00000361367 CLUAP1Q96AJ1 413 aa17.63■□□□□ 0.41
CTR9-201ENST00000361367 PRAM1Q96QH2 718 aa17.63■□□□□ 0.41
CTR9-201ENST00000361367 GGNBP2Q9H3C7 697 aa17.63■□□□□ 0.41
CTR9-201ENST00000361367 APBB1O00213 710 aa17.63■□□□□ 0.41
CTR9-201ENST00000361367 EVA1CP58658 441 aa17.62■□□□□ 0.41
CTR9-201ENST00000361367 APAF1O14727 1248 aa17.62■□□□□ 0.41
CTR9-201ENST00000361367 WASHC2AQ641Q2 1341 aa17.61■□□□□ 0.41
CTR9-201ENST00000361367 ERICH6BQ5W0A0 696 aa17.6■□□□□ 0.41
CTR9-201ENST00000361367 KCNJ4P48050 445 aa17.6■□□□□ 0.41
CTR9-201ENST00000361367 PROSER2Q86WR7 435 aaPredicted RBP17.6■□□□□ 0.41
CTR9-201ENST00000361367 PTPN23Q9H3S7 1636 aa17.59■□□□□ 0.41
CTR9-201ENST00000361367 C1orf141Q5JVX7 400 aa17.59■□□□□ 0.41
CTR9-201ENST00000361367 RPGRIP1LQ68CZ1 1315 aa17.59■□□□□ 0.41
CTR9-201ENST00000361367 SLC26A8Q96RN1 970 aa17.59■□□□□ 0.41
CTR9-201ENST00000361367 ERBINQ96RT1 1412 aa17.59■□□□□ 0.41
CTR9-201ENST00000361367 ELL2O00472 640 aaPredicted RBP17.59■□□□□ 0.41
CTR9-201ENST00000361367 RWDD1Q9H446 243 aaPredicted RBP17.59■□□□□ 0.41
CTR9-201ENST00000361367 SLC4A10Q6U841 1118 aa17.59■□□□□ 0.41
CTR9-201ENST00000361367 ANKRD30BQ9BXX2 1392 aa17.58■□□□□ 0.41
CTR9-201ENST00000361367 TEFQ10587 303 aa17.58■□□□□ 0.4
CTR9-201ENST00000361367 NLRP6P59044 892 aa17.57■□□□□ 0.4
CTR9-201ENST00000361367 FANCAO15360 1455 aa17.57■□□□□ 0.4
CTR9-201ENST00000361367 NCOA1Q15788 1441 aa17.57■□□□□ 0.4
CTR9-201ENST00000361367 ANKLE2Q86XL3 938 aa17.57■□□□□ 0.4
CTR9-201ENST00000361367 AKNAQ7Z591 1439 aa17.57■□□□□ 0.4
CTR9-201ENST00000361367 CNTLNQ9NXG0 1405 aa17.56■□□□□ 0.4
CTR9-201ENST00000361367 NUTM2GQ5VZR2 741 aa17.56■□□□□ 0.4
CTR9-201ENST00000361367 E9PSI1 815 aa17.56■□□□□ 0.4
CTR9-201ENST00000361367 ATP10BO94823 1461 aa17.55■□□□□ 0.4
CTR9-201ENST00000361367 HDAC5Q9UQL6 1122 aa17.55■□□□□ 0.4
CTR9-201ENST00000361367 THOC2Q8NI27 1593 aaKnown RBP17.55■□□□□ 0.4
CTR9-201ENST00000361367 DENND4BO75064 1496 aaPredicted RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms