RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 ANKRD50Q9ULJ7 1429 aa17.49■□□□□ 0.39
UBA3-202ENST00000361055 MYT1LQ9UL68 1186 aa17.49■□□□□ 0.39
UBA3-202ENST00000361055 ZMYM4Q5VZL5 1548 aa17.48■□□□□ 0.39
UBA3-202ENST00000361055 COL17A1Q9UMD9 1497 aaPredicted RBP17.46■□□□□ 0.39
UBA3-202ENST00000361055 TONSLQ96HA7 1378 aa17.45■□□□□ 0.38
UBA3-202ENST00000361055 MAGI2Q86UL8 1455 aa17.45■□□□□ 0.38
UBA3-202ENST00000361055 ERBINQ96RT1 1412 aa17.44■□□□□ 0.38
UBA3-202ENST00000361055 ABCA6Q8N139 1617 aa17.44■□□□□ 0.38
UBA3-202ENST00000361055 ANP32CO43423 234 aa17.43■□□□□ 0.38
UBA3-202ENST00000361055 DIP2CQ9Y2E4 1556 aa17.41■□□□□ 0.38
UBA3-202ENST00000361055 DHX29Q7Z478 1369 aaKnown RBP17.41■□□□□ 0.38
UBA3-202ENST00000361055 EIF2AK4Q9P2K8 1649 aaKnown RBP17.4■□□□□ 0.38
UBA3-202ENST00000361055 A2MP01023 1474 aa17.4■□□□□ 0.38
UBA3-202ENST00000361055 YEATS2Q9ULM3 1422 aa17.39■□□□□ 0.37
UBA3-202ENST00000361055 TRIM52Q96A61 297 aa17.38■□□□□ 0.37
UBA3-202ENST00000361055 HIRIP3Q9BW71 556 aaPredicted RBP17.38■□□□□ 0.37
UBA3-202ENST00000361055 TSHZ2Q9NRE2 1034 aa17.38■□□□□ 0.37
UBA3-202ENST00000361055 UNC13BO14795 1591 aa17.37■□□□□ 0.37
UBA3-202ENST00000361055 BCORL1Q5H9F3 1711 aa17.35■□□□□ 0.37
UBA3-202ENST00000361055 ATP10AO60312 1499 aa17.35■□□□□ 0.37
UBA3-202ENST00000361055 ARHGEF40Q8TER5 1519 aa17.34■□□□□ 0.37
UBA3-202ENST00000361055 KDM5DQ9BY66 1539 aa17.34■□□□□ 0.37
UBA3-202ENST00000361055 DEPDC5O75140 1603 aa17.34■□□□□ 0.37
UBA3-202ENST00000361055 REREQ9P2R6 1566 aa17.34■□□□□ 0.37
UBA3-202ENST00000361055 NUP155O75694 1391 aa17.32■□□□□ 0.36
UBA3-202ENST00000361055 KIF3BO15066 747 aa17.32■□□□□ 0.36
UBA3-202ENST00000361055 FKBP8Q14318 412 aa17.32■□□□□ 0.36
UBA3-202ENST00000361055 RNF17Q9BXT8 1623 aaKnown RBP17.31■□□□□ 0.36
UBA3-202ENST00000361055 MPHOSPH9Q99550 1183 aa17.3■□□□□ 0.36
UBA3-202ENST00000361055 PZPP20742 1482 aa17.3■□□□□ 0.36
UBA3-202ENST00000361055 IQGAP3Q86VI3 1631 aa17.3■□□□□ 0.36
UBA3-202ENST00000361055 SLC4A1APQ9BWU0 796 aaKnown RBP17.29■□□□□ 0.36
UBA3-202ENST00000361055 PRDM15P57071 1507 aaPredicted RBP17.29■□□□□ 0.36
UBA3-202ENST00000361055 NEFLP07196 543 aa17.28■□□□□ 0.36
UBA3-202ENST00000361055 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.28■□□□□ 0.36
UBA3-202ENST00000361055 FAM135AQ9P2D6 1515 aa17.28■□□□□ 0.36
UBA3-202ENST00000361055 MROH1Q8NDA8 1641 aa17.28■□□□□ 0.36
UBA3-202ENST00000361055 AGLP35573 1532 aa17.27■□□□□ 0.36
UBA3-202ENST00000361055 VWDEQ8N2E2 1590 aa17.25■□□□□ 0.35
UBA3-202ENST00000361055 KANK1Q14678 1352 aa17.25■□□□□ 0.35
UBA3-202ENST00000361055 SIGLEC1Q9BZZ2 1709 aa17.24■□□□□ 0.35
UBA3-202ENST00000361055 GGT6Q6P531 493 aa17.23■□□□□ 0.35
UBA3-202ENST00000361055 PKD2Q13563 968 aa17.21■□□□□ 0.35
UBA3-202ENST00000361055 BCANQ96GW7 911 aa17.21■□□□□ 0.35
UBA3-202ENST00000361055 TET3O43151 1660 aa17.21■□□□□ 0.35
UBA3-202ENST00000361055 CEP152O94986 1710 aa17.21■□□□□ 0.34
UBA3-202ENST00000361055 HSPA5P11021 654 aaKnown RBP17.21■□□□□ 0.34
UBA3-202ENST00000361055 LMTK2Q8IWU2 1503 aa17.2■□□□□ 0.34
UBA3-202ENST00000361055 ZC3H13Q5T200 1668 aaKnown RBP17.2■□□□□ 0.34
UBA3-202ENST00000361055 EIF4G2P78344 907 aaKnown RBP eCLIP17.19■□□□□ 0.34
UBA3-202ENST00000361055 FOXD1Q16676 465 aa17.18■□□□□ 0.34
UBA3-202ENST00000361055 WASHC2AQ641Q2 1341 aa17.18■□□□□ 0.34
UBA3-202ENST00000361055 E9PCH4 1651 aa17.17■□□□□ 0.34
UBA3-202ENST00000361055 PPP6R1Q9UPN7 881 aa17.17■□□□□ 0.34
UBA3-202ENST00000361055 WASHC2CQ9Y4E1 1318 aa17.17■□□□□ 0.34
UBA3-202ENST00000361055 ABCC3O15438 1527 aa17.16■□□□□ 0.34
UBA3-202ENST00000361055 ANKRD30BQ9BXX2 1392 aa17.16■□□□□ 0.34
UBA3-202ENST00000361055 EFCAB6Q5THR3 1501 aa17.15■□□□□ 0.34
UBA3-202ENST00000361055 ARID4BQ4LE39 1312 aaPredicted RBP17.15■□□□□ 0.34
UBA3-202ENST00000361055 CAMSAP1Q5T5Y3 1602 aa17.14■□□□□ 0.33
UBA3-202ENST00000361055 L3MBTL2Q969R5 705 aa17.14■□□□□ 0.33
UBA3-202ENST00000361055 RPRD2Q5VT52 1461 aaKnown RBP17.11■□□□□ 0.33
UBA3-202ENST00000361055 SPHKAPQ2M3C7 1700 aa17.11■□□□□ 0.33
UBA3-202ENST00000361055 MLECQ14165 292 aa17.11■□□□□ 0.33
UBA3-202ENST00000361055 CLTCQ00610 1675 aaKnown RBP17.1■□□□□ 0.33
UBA3-202ENST00000361055 HNRNPUQ00839 825 aaKnown RBP eCLIP17.1■□□□□ 0.33
UBA3-202ENST00000361055 ANP32EQ9BTT0 268 aa17.1■□□□□ 0.33
UBA3-202ENST00000361055 ARHGAP31Q2M1Z3 1444 aa17.09■□□□□ 0.33
UBA3-202ENST00000361055 CFAP65Q6ZU64 1925 aaKnown RBP17.08■□□□□ 0.33
UBA3-202ENST00000361055 NPATQ14207 1427 aa17.08■□□□□ 0.33
UBA3-202ENST00000361055 CNTLNQ9NXG0 1405 aa17.08■□□□□ 0.33
UBA3-202ENST00000361055 PTPRTO14522 1441 aa17.07■□□□□ 0.32
UBA3-202ENST00000361055 PLA2R1Q13018 1463 aa17.07■□□□□ 0.32
UBA3-202ENST00000361055 ERICH6BQ5W0A0 696 aa17.07■□□□□ 0.32
UBA3-202ENST00000361055 ESF1Q9H501 851 aaKnown RBP17.06■□□□□ 0.32
UBA3-202ENST00000361055 TRPM2O94759 1503 aa17.06■□□□□ 0.32
UBA3-202ENST00000361055 RBM19Q9Y4C8 960 aaKnown RBP17.06■□□□□ 0.32
UBA3-202ENST00000361055 CCDC7Q96M83 1385 aa17.06■□□□□ 0.32
UBA3-202ENST00000361055 CCDC144AA2RUR9 1427 aa17.05■□□□□ 0.32
UBA3-202ENST00000361055 MROH2AA6NES4 1674 aa17.04■□□□□ 0.32
UBA3-202ENST00000361055 FER1L4A9Z1Z3 1794 aa17.04■□□□□ 0.32
UBA3-202ENST00000361055 C11orf95C9JLR9 678 aaPredicted RBP17.04■□□□□ 0.32
UBA3-202ENST00000361055 PRKRIP1Q9H875 184 aaPredicted RBP17.04■□□□□ 0.32
UBA3-202ENST00000361055 NBPF8Q3BBV2 869 aa17.03■□□□□ 0.32
UBA3-202ENST00000361055 PREX1Q8TCU6 1659 aa17.02■□□□□ 0.32
UBA3-202ENST00000361055 NOS1P29475 1434 aa17.01■□□□□ 0.31
UBA3-202ENST00000361055 SPATA31E1Q6ZUB1 1445 aa17.01■□□□□ 0.31
UBA3-202ENST00000361055 ZMYM3Q14202 1370 aa17■□□□□ 0.31
UBA3-202ENST00000361055 CLTCL1P53675 1640 aa17■□□□□ 0.31
UBA3-202ENST00000361055 KIF1BO60333 1816 aa16.98■□□□□ 0.31
UBA3-202ENST00000361055 SYNMO15061 1565 aa16.98■□□□□ 0.31
UBA3-202ENST00000361055 ADAMTSL3P82987 1691 aa16.98■□□□□ 0.31
UBA3-202ENST00000361055 CCDC184Q52MB2 194 aa16.98■□□□□ 0.31
UBA3-202ENST00000361055 ERVK-7P63135 1459 aa16.98■□□□□ 0.31
UBA3-202ENST00000361055 SPATA31D1Q6ZQQ2 1576 aa16.97■□□□□ 0.31
UBA3-202ENST00000361055 PIK3C2BO00750 1634 aa16.96■□□□□ 0.31
UBA3-202ENST00000361055 MADDQ8WXG6 1647 aa16.96■□□□□ 0.31
UBA3-202ENST00000361055 UGGT1Q9NYU2 1555 aa16.96■□□□□ 0.31
UBA3-202ENST00000361055 C3P01024 1663 aa16.96■□□□□ 0.3
UBA3-202ENST00000361055 KIF7Q2M1P5 1343 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms