RNA–Protein interactions for RNA: ENST00000358678.7

MRPL42-201, Transcript of mitochondrial ribosomal protein L42, humanhuman

TSL 1 (best)

Gene MRPL42, Length 2,105 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL42-201ENST00000358678 ST18O60284 1047 aa8.18□□□□□ -1.1
MRPL42-201ENST00000358678 TBC1D12O60347 775 aa8.17□□□□□ -1.1
MRPL42-201ENST00000358678 SLC34A2O95436 690 aa8.15□□□□□ -1.1
MRPL42-201ENST00000358678 MS4A1P11836 297 aa8.15□□□□□ -1.1
MRPL42-201ENST00000358678 PHOX2BQ99453 314 aa8.15□□□□□ -1.11
MRPL42-201ENST00000358678 EN1Q05925 392 aaPredicted RBP8.14□□□□□ -1.11
MRPL42-201ENST00000358678 DDRGK1Q96HY6 314 aa8.14□□□□□ -1.11
MRPL42-201ENST00000358678 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.14□□□□□ -1.11
MRPL42-201ENST00000358678 DAXXQ9UER7 740 aaPredicted RBP8.14□□□□□ -1.11
MRPL42-201ENST00000358678 KDM4FA0A1W2PPD8 638 aa8.13□□□□□ -1.11
MRPL42-201ENST00000358678 TSR1Q2NL82 804 aaKnown RBP8.13□□□□□ -1.11
MRPL42-201ENST00000358678 GIGYF2Q6Y7W6 1299 aaKnown RBP8.13□□□□□ -1.11
MRPL42-201ENST00000358678 PCDHGA10Q9Y5H3 936 aa8.13□□□□□ -1.11
MRPL42-201ENST00000358678 TMUB1Q9BVT8 246 aa8.12□□□□□ -1.11
MRPL42-201ENST00000358678 TTLL12Q14166 644 aaPredicted RBP8.12□□□□□ -1.11
MRPL42-201ENST00000358678 C3orf67Q6ZVT6 689 aa8.11□□□□□ -1.11
MRPL42-201ENST00000358678 ZMYND15Q9H091 742 aa8.11□□□□□ -1.11
MRPL42-201ENST00000358678 PHF14O94880 888 aa8.11□□□□□ -1.11
MRPL42-201ENST00000358678 MMRN1Q13201 1228 aa8.11□□□□□ -1.11
MRPL42-201ENST00000358678 HOMEZQ8IX15 550 aa8.1□□□□□ -1.11
MRPL42-201ENST00000358678 RBM33Q96EV2 1170 aaKnown RBP8.1□□□□□ -1.11
MRPL42-201ENST00000358678 ONECUT3O60422 494 aaPredicted RBP8.09□□□□□ -1.11
MRPL42-201ENST00000358678 SPNS2Q8IVW8 549 aa8.09□□□□□ -1.11
MRPL42-201ENST00000358678 PCDHGA4Q9Y5G9 962 aa8.09□□□□□ -1.11
MRPL42-201ENST00000358678 MAP3K7O43318 606 aa8.08□□□□□ -1.12
MRPL42-201ENST00000358678 FAM161AQ3B820 660 aa8.08□□□□□ -1.12
MRPL42-201ENST00000358678 EPAS1Q99814 870 aa8.08□□□□□ -1.12
MRPL42-201ENST00000358678 C1orf115Q9H7X2 142 aa8.08□□□□□ -1.12
MRPL42-201ENST00000358678 GOPCQ9HD26 462 aa8.07□□□□□ -1.12
MRPL42-201ENST00000358678 NLRP7Q8WX94 980 aa8.06□□□□□ -1.12
MRPL42-201ENST00000358678 MDM2Q00987 491 aaPredicted RBP8.05□□□□□ -1.12
MRPL42-201ENST00000358678 RSPH6AQ9H0K4 717 aa8.04□□□□□ -1.12
MRPL42-201ENST00000358678 TYW1BQ6NUM6 668 aa8.03□□□□□ -1.12
MRPL42-201ENST00000358678 JPH4Q96JJ6 628 aa8.03□□□□□ -1.12
MRPL42-201ENST00000358678 FOSBP53539 338 aa8.03□□□□□ -1.12
MRPL42-201ENST00000358678 METTL3Q86U44 580 aaKnown RBP8.02□□□□□ -1.13
MRPL42-201ENST00000358678 KHSRPQ92945 711 aaKnown RBP eCLIP8.02□□□□□ -1.135e-6■■■□□ 15.3
MRPL42-201ENST00000358678 GPCPD1Q9NPB8 672 aa8.02□□□□□ -1.13
MRPL42-201ENST00000358678 UBTFP17480 764 aaKnown RBP8.02□□□□□ -1.13
MRPL42-201ENST00000358678 PADI6Q6TGC4 694 aa8.02□□□□□ -1.13
MRPL42-201ENST00000358678 CLCN1P35523 988 aa8.01□□□□□ -1.13
MRPL42-201ENST00000358678 EMP3P54852 163 aa8□□□□□ -1.13
MRPL42-201ENST00000358678 TTC13Q8NBP0 860 aa8□□□□□ -1.13
MRPL42-201ENST00000358678 SSTR3P32745 418 aaPredicted RBP8□□□□□ -1.13
MRPL42-201ENST00000358678 SH3D19Q5HYK7 790 aa8□□□□□ -1.13
MRPL42-201ENST00000358678 C6orf132Q5T0Z8 1188 aa8□□□□□ -1.13
MRPL42-201ENST00000358678 FAM217BQ9NTX9 383 aaPredicted RBP8□□□□□ -1.13
MRPL42-201ENST00000358678 ADGRG1Q9Y653 693 aa8□□□□□ -1.13
MRPL42-201ENST00000358678 PXYLP1Q8TE99 480 aa7.99□□□□□ -1.13
MRPL42-201ENST00000358678 FBXW7Q969H0 707 aa7.99□□□□□ -1.13
MRPL42-201ENST00000358678 ARID3CA6NKF2 412 aa7.99□□□□□ -1.13
MRPL42-201ENST00000358678 HOXB3P14651 431 aaPredicted RBP7.99□□□□□ -1.13
MRPL42-201ENST00000358678 MARVELD3Q96A59 401 aa7.99□□□□□ -1.13
MRPL42-201ENST00000358678 ADAM33Q9BZ11 813 aa7.99□□□□□ -1.13
MRPL42-201ENST00000358678 NUDT7P0C024 238 aa7.97□□□□□ -1.13
MRPL42-201ENST00000358678 PROCA1Q8NCQ7 364 aaPredicted RBP7.97□□□□□ -1.13
MRPL42-201ENST00000358678 CLUAP1Q96AJ1 413 aa7.97□□□□□ -1.13
MRPL42-201ENST00000358678 BEGAINQ9BUH8 593 aa7.97□□□□□ -1.13
MRPL42-201ENST00000358678 FLIIQ13045 1269 aa7.97□□□□□ -1.13
MRPL42-201ENST00000358678 FBXO31Q5XUX0 539 aaPredicted RBP7.97□□□□□ -1.13
MRPL42-201ENST00000358678 PCMTD1Q96MG8 357 aaPredicted RBP7.97□□□□□ -1.13
MRPL42-201ENST00000358678 FAM198AQ9UFP1 575 aa7.97□□□□□ -1.13
MRPL42-201ENST00000358678 ZNF454Q8N9F8 522 aa7.96□□□□□ -1.13
MRPL42-201ENST00000358678 MCM6Q14566 821 aa7.96□□□□□ -1.14
MRPL42-201ENST00000358678 ARSIQ5FYB1 569 aa7.96□□□□□ -1.14
MRPL42-201ENST00000358678 ZDHHC16Q969W1 377 aa7.96□□□□□ -1.14
MRPL42-201ENST00000358678 C3orf80F5H4A9 247 aa7.95□□□□□ -1.14
MRPL42-201ENST00000358678 SKIV2LQ15477 1246 aaKnown RBP7.95□□□□□ -1.14
MRPL42-201ENST00000358678 GPR153Q6NV75 609 aa7.95□□□□□ -1.14
MRPL42-201ENST00000358678 MYSM1Q5VVJ2 828 aa7.94□□□□□ -1.14
MRPL42-201ENST00000358678 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.94□□□□□ -1.14
MRPL42-201ENST00000358678 RBM27Q9P2N5 1060 aaKnown RBP7.94□□□□□ -1.14
MRPL42-201ENST00000358678 OATP04181 439 aa7.93□□□□□ -1.14
MRPL42-201ENST00000358678 COL9A1P20849 921 aa7.93□□□□□ -1.14
MRPL42-201ENST00000358678 CERKQ8TCT0 537 aa7.93□□□□□ -1.14
MRPL42-201ENST00000358678 ARID3AQ99856 593 aa7.93□□□□□ -1.14
MRPL42-201ENST00000358678 POLR3EQ9NVU0 708 aa7.93□□□□□ -1.14
MRPL42-201ENST00000358678 PRSS12P56730 875 aa7.91□□□□□ -1.14
MRPL42-201ENST00000358678 CDCA7LQ96GN5 454 aa7.91□□□□□ -1.14
MRPL42-201ENST00000358678 APBB1O00213 710 aa7.91□□□□□ -1.14
MRPL42-201ENST00000358678 POM121Q96HA1 1249 aa7.91□□□□□ -1.14
MRPL42-201ENST00000358678 FAM205CA6NFA0 338 aa7.9□□□□□ -1.14
MRPL42-201ENST00000358678 A6NJR5 290 aa7.9□□□□□ -1.14
MRPL42-201ENST00000358678 HS3ST6Q96QI5 342 aa7.9□□□□□ -1.14
MRPL42-201ENST00000358678 LHX6Q9UPM6 363 aa7.9□□□□□ -1.15
MRPL42-201ENST00000358678 TSKSQ9UJT2 592 aa7.89□□□□□ -1.15
MRPL42-201ENST00000358678 TRAK2O60296 914 aa7.88□□□□□ -1.15
MRPL42-201ENST00000358678 EYA1Q99502 592 aa7.88□□□□□ -1.15
MRPL42-201ENST00000358678 TBC1D2Q9BYX2 928 aa7.88□□□□□ -1.15
MRPL42-201ENST00000358678 LIMD1Q9UGP4 676 aa7.88□□□□□ -1.15
MRPL42-201ENST00000358678 DOK7Q18PE1 504 aa7.87□□□□□ -1.15
MRPL42-201ENST00000358678 FNBP4Q8N3X1 1017 aaPredicted RBP7.87□□□□□ -1.15
MRPL42-201ENST00000358678 CLK2P49760 499 aaKnown RBP7.87□□□□□ -1.15
MRPL42-201ENST00000358678 RCCD1A6NED2 376 aa7.86□□□□□ -1.15
MRPL42-201ENST00000358678 ZNF710Q8N1W2 664 aa7.85□□□□□ -1.15
MRPL42-201ENST00000358678 BCL2L12Q9HB09 334 aa7.85□□□□□ -1.15
MRPL42-201ENST00000358678 ZSWIM6Q9HCJ5 1215 aa7.85□□□□□ -1.15
MRPL42-201ENST00000358678 RBM46Q8TBY0 533 aaKnown RBP7.85□□□□□ -1.15
MRPL42-201ENST00000358678 SPIRE2Q8WWL2 714 aa7.85□□□□□ -1.15
MRPL42-201ENST00000358678 CD46P15529 392 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms