RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 POGZQ7Z3K3 1410 aa14.19□□□□□ -0.14
FN1-204ENST00000356005 CGNL1Q0VF96 1302 aa14.18□□□□□ -0.14
FN1-204ENST00000356005 RAB3GAP2Q9H2M9 1393 aa14.18□□□□□ -0.14
FN1-204ENST00000356005 HTATSF1O43719 755 aaKnown RBP14.18□□□□□ -0.14
FN1-204ENST00000356005 HSCBQ8IWL3 235 aa14.17□□□□□ -0.14
FN1-204ENST00000356005 MYOM3Q5VTT5 1437 aa14.17□□□□□ -0.14
FN1-204ENST00000356005 LAMC3Q9Y6N6 1575 aa14.17□□□□□ -0.14
FN1-204ENST00000356005 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.17□□□□□ -0.14
FN1-204ENST00000356005 GLIPR1L2Q4G1C9 344 aa14.16□□□□□ -0.14
FN1-204ENST00000356005 HMGXB3Q12766 1538 aa14.16□□□□□ -0.14
FN1-204ENST00000356005 LTV1Q96GA3 475 aaPredicted RBP14.16□□□□□ -0.14
FN1-204ENST00000356005 KIAA2012Q0VF49 1180 aa14.16□□□□□ -0.14
FN1-204ENST00000356005 SUPT6HQ7KZ85 1726 aaKnown RBP14.16□□□□□ -0.14
FN1-204ENST00000356005 CHAF1AQ13111 956 aaPredicted RBP14.16□□□□□ -0.14
FN1-204ENST00000356005 TTC5Q8N0Z6 440 aa14.16□□□□□ -0.14
FN1-204ENST00000356005 MIA2Q96PC5 1412 aa14.15□□□□□ -0.14
FN1-204ENST00000356005 NOL10Q9BSC4 688 aaKnown RBP14.15□□□□□ -0.14
FN1-204ENST00000356005 TRAK1Q9UPV9 953 aa14.15□□□□□ -0.14
FN1-204ENST00000356005 NBR1Q14596 966 aa14.15□□□□□ -0.14
FN1-204ENST00000356005 SUPT16HQ9Y5B9 1047 aaKnown RBP14.15□□□□□ -0.14
FN1-204ENST00000356005 AMOTL1Q8IY63 956 aa14.14□□□□□ -0.15
FN1-204ENST00000356005 HECW1Q76N89 1606 aa14.14□□□□□ -0.15
FN1-204ENST00000356005 RGS3P49796 1198 aa14.14□□□□□ -0.15
FN1-204ENST00000356005 NUTM2DQ5VT03 806 aaPredicted RBP14.14□□□□□ -0.15
FN1-204ENST00000356005 PLEKHH2Q8IVE3 1493 aa14.14□□□□□ -0.15
FN1-204ENST00000356005 TEFQ10587 303 aa14.14□□□□□ -0.15
FN1-204ENST00000356005 NUTM2FA1L443 756 aa14.13□□□□□ -0.15
FN1-204ENST00000356005 HSPA5P11021 654 aaKnown RBP14.13□□□□□ -0.15
FN1-204ENST00000356005 CCER2I3L3R5 266 aa14.13□□□□□ -0.15
FN1-204ENST00000356005 TRIM34Q9BYJ4 488 aa14.13□□□□□ -0.15
FN1-204ENST00000356005 PPP4R2Q9NY27 417 aa14.13□□□□□ -0.15
FN1-204ENST00000356005 SF3B2Q13435 895 aaKnown RBP14.13□□□□□ -0.15
FN1-204ENST00000356005 CHMP4CQ96CF2 233 aa14.13□□□□□ -0.15
FN1-204ENST00000356005 NEXNQ0ZGT2 675 aa14.12□□□□□ -0.15
FN1-204ENST00000356005 RWDD1Q9H446 243 aaPredicted RBP14.12□□□□□ -0.15
FN1-204ENST00000356005 DHX57Q6P158 1386 aaKnown RBP14.12□□□□□ -0.15
FN1-204ENST00000356005 CUL7Q14999 1698 aa14.11□□□□□ -0.15
FN1-204ENST00000356005 DNTTIP2Q5QJE6 756 aaKnown RBP14.11□□□□□ -0.15
FN1-204ENST00000356005 PMFBP1Q8TBY8 1022 aa14.11□□□□□ -0.15
FN1-204ENST00000356005 ITPRIPQ8IWB1 547 aa14.11□□□□□ -0.15
FN1-204ENST00000356005 PTMSP20962 102 aa14.1□□□□□ -0.15
FN1-204ENST00000356005 KANK4Q5T7N3 995 aaPredicted RBP14.1□□□□□ -0.15
FN1-204ENST00000356005 RRBP1Q9P2E9 1410 aaKnown RBP14.1□□□□□ -0.15
FN1-204ENST00000356005 RAD54L2Q9Y4B4 1467 aa14.09□□□□□ -0.15
FN1-204ENST00000356005 SMC4Q9NTJ3 1288 aa14.09□□□□□ -0.15
FN1-204ENST00000356005 DNMBPQ6XZF7 1577 aa14.09□□□□□ -0.15
FN1-204ENST00000356005 TPRNQ4KMQ1 711 aa14.09□□□□□ -0.15
FN1-204ENST00000356005 KIF3AQ9Y496 699 aa14.09□□□□□ -0.15
FN1-204ENST00000356005 KIF15Q9NS87 1388 aa14.09□□□□□ -0.15
FN1-204ENST00000356005 EFCAB5A4FU69 1503 aa14.08□□□□□ -0.16
FN1-204ENST00000356005 HSP90B1P14625 803 aaKnown RBP14.08□□□□□ -0.16
FN1-204ENST00000356005 GPRASP1Q5JY77 1395 aa14.08□□□□□ -0.16
FN1-204ENST00000356005 DDX58O95786 925 aaKnown RBP14.07□□□□□ -0.16
FN1-204ENST00000356005 THEMISQ8N1K5 641 aaPredicted RBP14.07□□□□□ -0.16
FN1-204ENST00000356005 SYTL4Q96C24 671 aaPredicted RBP14.07□□□□□ -0.16
FN1-204ENST00000356005 AQRO60306 1485 aaKnown RBP eCLIP14.07□□□□□ -0.169e-12■■■■■ 26.9
FN1-204ENST00000356005 CTDP1Q9Y5B0 961 aaPredicted RBP14.06□□□□□ -0.16
FN1-204ENST00000356005 SLC4A10Q6U841 1118 aa14.06□□□□□ -0.16
FN1-204ENST00000356005 TRIM6-TRIM34B2RNG4 842 aa14.06□□□□□ -0.16
FN1-204ENST00000356005 NLRP13Q86W25 1043 aa14.06□□□□□ -0.16
FN1-204ENST00000356005 FYCO1Q9BQS8 1478 aa14.05□□□□□ -0.16
FN1-204ENST00000356005 VPS37DQ86XT2 251 aa14.05□□□□□ -0.16
FN1-204ENST00000356005 PRG4Q92954 1404 aaPredicted RBP14.05□□□□□ -0.16
FN1-204ENST00000356005 CSPP1Q1MSJ5 1256 aa14.04□□□□□ -0.16
FN1-204ENST00000356005 PLCB2Q00722 1185 aa14.04□□□□□ -0.16
FN1-204ENST00000356005 RAPGEF4Q8WZA2 1011 aa14.04□□□□□ -0.16
FN1-204ENST00000356005 ERICH3Q5RHP9 1530 aa14.04□□□□□ -0.16
FN1-204ENST00000356005 SMG6Q86US8 1419 aaKnown RBP14.04□□□□□ -0.16
FN1-204ENST00000356005 APBB1O00213 710 aa14.03□□□□□ -0.16
FN1-204ENST00000356005 TPM4P67936 248 aa14.03□□□□□ -0.16
FN1-204ENST00000356005 WWC1Q8IX03 1113 aa14.03□□□□□ -0.16
FN1-204ENST00000356005 TCEAL9Q9UHQ7 104 aa14.03□□□□□ -0.16
FN1-204ENST00000356005 SENP3-EIF4A1A0A087X0R7 540 aa14.03□□□□□ -0.16
FN1-204ENST00000356005 NCBP3Q53F19 620 aaKnown RBP14.03□□□□□ -0.16
FN1-204ENST00000356005 SYNJ1O43426 1573 aa14.02□□□□□ -0.16
FN1-204ENST00000356005 MINK1Q8N4C8 1332 aaPredicted RBP14.02□□□□□ -0.17
FN1-204ENST00000356005 ROCK1Q13464 1354 aa14.02□□□□□ -0.17
FN1-204ENST00000356005 RCAN3Q9UKA8 241 aa14.01□□□□□ -0.17
FN1-204ENST00000356005 MARCH6O60337 910 aa14.01□□□□□ -0.17
FN1-204ENST00000356005 CFTRP13569 1480 aa14.01□□□□□ -0.17
FN1-204ENST00000356005 TOP2BQ02880 1626 aa14.01□□□□□ -0.17
FN1-204ENST00000356005 CWC22Q9HCG8 908 aaKnown RBP14□□□□□ -0.17
FN1-204ENST00000356005 L3MBTL2Q969R5 705 aa14□□□□□ -0.17
FN1-204ENST00000356005 PDE3BQ13370 1112 aa14□□□□□ -0.17
FN1-204ENST00000356005 CFAP65Q6ZU64 1925 aaKnown RBP14□□□□□ -0.17
FN1-204ENST00000356005 NGEFQ8N5V2 710 aa13.99□□□□□ -0.17
FN1-204ENST00000356005 SYAP1Q96A49 352 aaPredicted RBP13.99□□□□□ -0.17
FN1-204ENST00000356005 VPS53Q5VIR6 699 aa13.99□□□□□ -0.17
FN1-204ENST00000356005 C9orf78Q9NZ63 289 aaPredicted RBP13.99□□□□□ -0.17
FN1-204ENST00000356005 RASSF8Q8NHQ8 419 aa13.99□□□□□ -0.17
FN1-204ENST00000356005 RBM33Q96EV2 1170 aaKnown RBP13.99□□□□□ -0.17
FN1-204ENST00000356005 TOPBP1Q92547 1522 aa13.99□□□□□ -0.17
FN1-204ENST00000356005 CENPJQ9HC77 1338 aaPredicted RBP13.99□□□□□ -0.17
FN1-204ENST00000356005 AKAP17AQ02040 695 aaKnown RBP13.99□□□□□ -0.17
FN1-204ENST00000356005 DRC7Q8IY82 874 aa13.99□□□□□ -0.17
FN1-204ENST00000356005 EHBP1L1Q8N3D4 1523 aa13.98□□□□□ -0.17
FN1-204ENST00000356005 SNAPC4Q5SXM2 1469 aa13.97□□□□□ -0.17
FN1-204ENST00000356005 ERICH6BQ5W0A0 696 aa13.97□□□□□ -0.17
FN1-204ENST00000356005 KIF14Q15058 1648 aa13.96□□□□□ -0.17
FN1-204ENST00000356005 ANKLE2Q86XL3 938 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms