RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 KDM5DQ9BY66 1539 aa19.18■□□□□ 0.66
UBA3-201ENST00000349511 PPP1R15AO75807 674 aaPredicted RBP19.18■□□□□ 0.66
UBA3-201ENST00000349511 TIMELESSQ9UNS1 1208 aa19.17■□□□□ 0.66
UBA3-201ENST00000349511 UNC13BO14795 1591 aa19.17■□□□□ 0.66
UBA3-201ENST00000349511 KDM5CP41229 1560 aa19.17■□□□□ 0.66
UBA3-201ENST00000349511 PPRC1Q5VV67 1664 aaKnown RBP19.16■□□□□ 0.66
UBA3-201ENST00000349511 DHX29Q7Z478 1369 aaKnown RBP19.16■□□□□ 0.66
UBA3-201ENST00000349511 HECW2Q9P2P5 1572 aa19.14■□□□□ 0.65
UBA3-201ENST00000349511 L3MBTL2Q969R5 705 aa19.13■□□□□ 0.65
UBA3-201ENST00000349511 MLH3Q9UHC1 1453 aa19.13■□□□□ 0.65
UBA3-201ENST00000349511 RICTORQ6R327 1708 aa19.13■□□□□ 0.65
UBA3-201ENST00000349511 RPRD2Q5VT52 1461 aaKnown RBP19.12■□□□□ 0.65
UBA3-201ENST00000349511 A2MP01023 1474 aa19.11■□□□□ 0.65
UBA3-201ENST00000349511 IQGAP3Q86VI3 1631 aa19.1■□□□□ 0.65
UBA3-201ENST00000349511 ABCA6Q8N139 1617 aa19.1■□□□□ 0.65
UBA3-201ENST00000349511 MAGI2Q86UL8 1455 aa19.1■□□□□ 0.65
UBA3-201ENST00000349511 GGT6Q6P531 493 aa19.09■□□□□ 0.65
UBA3-201ENST00000349511 TEX14Q8IWB6 1497 aa19.09■□□□□ 0.65
UBA3-201ENST00000349511 YEATS2Q9ULM3 1422 aa19.09■□□□□ 0.65
UBA3-201ENST00000349511 FRMPD1Q5SYB0 1578 aa19.08■□□□□ 0.64
UBA3-201ENST00000349511 TRHP20396 242 aaPredicted RBP19.07■□□□□ 0.64
UBA3-201ENST00000349511 HIRIP3Q9BW71 556 aaPredicted RBP19.06■□□□□ 0.64
UBA3-201ENST00000349511 DNAJC5Q9H3Z4 198 aa19.06■□□□□ 0.64
UBA3-201ENST00000349511 DEPDC5O75140 1603 aa19.05■□□□□ 0.64
UBA3-201ENST00000349511 COL17A1Q9UMD9 1497 aaPredicted RBP19.04■□□□□ 0.64
UBA3-201ENST00000349511 DIP2CQ9Y2E4 1556 aa19.04■□□□□ 0.64
UBA3-201ENST00000349511 KANK1Q14678 1352 aa19.04■□□□□ 0.64
UBA3-201ENST00000349511 EIF2AK4Q9P2K8 1649 aaKnown RBP19.03■□□□□ 0.64
UBA3-201ENST00000349511 PLA2R1Q13018 1463 aa19.02■□□□□ 0.64
UBA3-201ENST00000349511 MROH1Q8NDA8 1641 aa19.02■□□□□ 0.64
UBA3-201ENST00000349511 ZNF326Q5BKZ1 582 aaKnown RBP19.01■□□□□ 0.63
UBA3-201ENST00000349511 RGL3Q3MIN7 710 aa19.01■□□□□ 0.63
UBA3-201ENST00000349511 CCDC144AA2RUR9 1427 aa19■□□□□ 0.63
UBA3-201ENST00000349511 E9PCH4 1651 aa19■□□□□ 0.63
UBA3-201ENST00000349511 NBPF8Q3BBV2 869 aa19■□□□□ 0.63
UBA3-201ENST00000349511 KDM2AQ9Y2K7 1162 aa19■□□□□ 0.63
UBA3-201ENST00000349511 PRDM15P57071 1507 aaPredicted RBP18.99■□□□□ 0.63
UBA3-201ENST00000349511 VWDEQ8N2E2 1590 aa18.97■□□□□ 0.63
UBA3-201ENST00000349511 WASHC2CQ9Y4E1 1318 aa18.97■□□□□ 0.63
UBA3-201ENST00000349511 CEP152O94986 1710 aa18.96■□□□□ 0.63
UBA3-201ENST00000349511 CFAP65Q6ZU64 1925 aaKnown RBP18.96■□□□□ 0.63
UBA3-201ENST00000349511 DCAF11Q8TEB1 546 aa18.96■□□□□ 0.63
UBA3-201ENST00000349511 ZMYM4Q5VZL5 1548 aa18.96■□□□□ 0.63
UBA3-201ENST00000349511 TET3O43151 1660 aa18.95■□□□□ 0.62
UBA3-201ENST00000349511 RNF17Q9BXT8 1623 aaKnown RBP18.94■□□□□ 0.62
UBA3-201ENST00000349511 ATP10AO60312 1499 aa18.94■□□□□ 0.62
UBA3-201ENST00000349511 MLECQ14165 292 aa18.92■□□□□ 0.62
UBA3-201ENST00000349511 SPHKAPQ2M3C7 1700 aa18.9■□□□□ 0.62
UBA3-201ENST00000349511 EFCAB6Q5THR3 1501 aa18.89■□□□□ 0.61
UBA3-201ENST00000349511 BCORL1Q5H9F3 1711 aa18.88■□□□□ 0.61
UBA3-201ENST00000349511 UGGT1Q9NYU2 1555 aa18.87■□□□□ 0.61
UBA3-201ENST00000349511 PTPRTO14522 1441 aa18.87■□□□□ 0.61
UBA3-201ENST00000349511 SIGLEC1Q9BZZ2 1709 aa18.87■□□□□ 0.61
UBA3-201ENST00000349511 ABCC3O15438 1527 aa18.87■□□□□ 0.61
UBA3-201ENST00000349511 NPATQ14207 1427 aa18.86■□□□□ 0.61
UBA3-201ENST00000349511 TRPM2O94759 1503 aa18.86■□□□□ 0.61
UBA3-201ENST00000349511 LMTK2Q8IWU2 1503 aa18.86■□□□□ 0.61
UBA3-201ENST00000349511 CLTCL1P53675 1640 aa18.85■□□□□ 0.61
UBA3-201ENST00000349511 HSPA5P11021 654 aaKnown RBP18.85■□□□□ 0.61
UBA3-201ENST00000349511 CHGAP10645 457 aaKnown RBP18.82■□□□□ 0.6
UBA3-201ENST00000349511 EIF4G2P78344 907 aaKnown RBP eCLIP18.82■□□□□ 0.6
UBA3-201ENST00000349511 ARID4BQ4LE39 1312 aaPredicted RBP18.82■□□□□ 0.6
UBA3-201ENST00000349511 CAMSAP1Q5T5Y3 1602 aa18.82■□□□□ 0.6
UBA3-201ENST00000349511 ARHGEF40Q8TER5 1519 aa18.82■□□□□ 0.6
UBA3-201ENST00000349511 SPATA31E1Q6ZUB1 1445 aa18.81■□□□□ 0.6
UBA3-201ENST00000349511 DDX10Q13206 875 aaKnown RBP18.79■□□□□ 0.6
UBA3-201ENST00000349511 UHRF1BP1Q6BDS2 1440 aa18.78■□□□□ 0.6
UBA3-201ENST00000349511 FBXO31Q5XUX0 539 aaPredicted RBP18.77■□□□□ 0.6
UBA3-201ENST00000349511 REREQ9P2R6 1566 aa18.77■□□□□ 0.6
UBA3-201ENST00000349511 CARD11Q9BXL7 1154 aa18.77■□□□□ 0.6
UBA3-201ENST00000349511 NBPF1Q3BBV0 1214 aa18.76■□□□□ 0.59
UBA3-201ENST00000349511 PRAG1Q86YV5 1406 aa18.76■□□□□ 0.59
UBA3-201ENST00000349511 AGLP35573 1532 aa18.76■□□□□ 0.59
UBA3-201ENST00000349511 ZC3H13Q5T200 1668 aaKnown RBP18.74■□□□□ 0.59
UBA3-201ENST00000349511 ROCK2O75116 1388 aaKnown RBP18.74■□□□□ 0.59
UBA3-201ENST00000349511 KIF1BO60333 1816 aa18.73■□□□□ 0.59
UBA3-201ENST00000349511 CLTCQ00610 1675 aaKnown RBP18.73■□□□□ 0.59
UBA3-201ENST00000349511 RALGAPBQ86X10 1494 aa18.72■□□□□ 0.59
UBA3-201ENST00000349511 C11orf95C9JLR9 678 aaPredicted RBP18.72■□□□□ 0.59
UBA3-201ENST00000349511 CNTLNQ9NXG0 1405 aa18.72■□□□□ 0.59
UBA3-201ENST00000349511 MROH2AA6NES4 1674 aa18.72■□□□□ 0.59
UBA3-201ENST00000349511 USP47Q96K76 1375 aa18.72■□□□□ 0.59
UBA3-201ENST00000349511 NOS1P29475 1434 aa18.71■□□□□ 0.59
UBA3-201ENST00000349511 ESF1Q9H501 851 aaKnown RBP18.71■□□□□ 0.59
UBA3-201ENST00000349511 IDI1Q13907 227 aa18.71■□□□□ 0.59
UBA3-201ENST00000349511 SYNMO15061 1565 aa18.7■□□□□ 0.58
UBA3-201ENST00000349511 ARHGAP31Q2M1Z3 1444 aa18.7■□□□□ 0.58
UBA3-201ENST00000349511 SUPT16HQ9Y5B9 1047 aaKnown RBP18.7■□□□□ 0.58
UBA3-201ENST00000349511 NUTM2DQ5VT03 806 aaPredicted RBP18.7■□□□□ 0.58
UBA3-201ENST00000349511 TRPM1Q7Z4N2 1603 aa18.69■□□□□ 0.58
UBA3-201ENST00000349511 WASHC2AQ641Q2 1341 aa18.69■□□□□ 0.58
UBA3-201ENST00000349511 SENP3Q9H4L4 574 aaPredicted RBP18.68■□□□□ 0.58
UBA3-201ENST00000349511 PREX1Q8TCU6 1659 aa18.68■□□□□ 0.58
UBA3-201ENST00000349511 PPP6R1Q9UPN7 881 aa18.67■□□□□ 0.58
UBA3-201ENST00000349511 ADGRF5Q8IZF2 1346 aa18.67■□□□□ 0.58
UBA3-201ENST00000349511 ST20-MTHFSA0A0A6YYL1 179 aa18.66■□□□□ 0.58
UBA3-201ENST00000349511 PLPPR3Q6T4P5 718 aa18.66■□□□□ 0.58
UBA3-201ENST00000349511 POLR3GLQ9BT43 218 aa18.65■□□□□ 0.58
UBA3-201ENST00000349511 ADGRB3O60242 1522 aa18.65■□□□□ 0.58
UBA3-201ENST00000349511 ZMYM3Q14202 1370 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms