RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 POLA1P09884 1462 aaPredicted RBP19.82■□□□□ 0.76
LMNA-201ENST00000347559 SPRYD3Q8NCJ5 442 aa19.82■□□□□ 0.76
LMNA-201ENST00000347559 PZPP20742 1482 aa19.82■□□□□ 0.76
LMNA-201ENST00000347559 PARD3Q8TEW0 1356 aa19.82■□□□□ 0.76
LMNA-201ENST00000347559 PANK2Q9BZ23 570 aa19.82■□□□□ 0.76
LMNA-201ENST00000347559 SAMD9Q5K651 1589 aa19.81■□□□□ 0.76
LMNA-201ENST00000347559 THOC2Q8NI27 1593 aaKnown RBP19.81■□□□□ 0.76
LMNA-201ENST00000347559 SEC24BO95487 1268 aa19.81■□□□□ 0.76
LMNA-201ENST00000347559 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.8■□□□□ 0.76
LMNA-201ENST00000347559 KIAA1107Q9UPP5 1409 aa19.8■□□□□ 0.76
LMNA-201ENST00000347559 CUL7Q14999 1698 aa19.8■□□□□ 0.76
LMNA-201ENST00000347559 PRDM2Q13029 1718 aa19.8■□□□□ 0.76
LMNA-201ENST00000347559 XRCC6P12956 609 aaKnown RBP eCLIP19.8■□□□□ 0.766e-7■■■■□ 20.4
LMNA-201ENST00000347559 ADAMTS8Q9UP79 889 aa19.8■□□□□ 0.76
LMNA-201ENST00000347559 FANCD2Q9BXW9 1451 aa19.8■□□□□ 0.76
LMNA-201ENST00000347559 CC2D2AQ9P2K1 1620 aa19.79■□□□□ 0.76
LMNA-201ENST00000347559 GOLGA6L3A6NEY3 463 aa19.79■□□□□ 0.76
LMNA-201ENST00000347559 KIF14Q15058 1648 aa19.79■□□□□ 0.76
LMNA-201ENST00000347559 EPRSP07814 1512 aaKnown RBP19.78■□□□□ 0.76
LMNA-201ENST00000347559 USP19O94966 1318 aa19.76■□□□□ 0.75
LMNA-201ENST00000347559 DUSP27Q5VZP5 1158 aa19.76■□□□□ 0.75
LMNA-201ENST00000347559 RALGAPBQ86X10 1494 aa19.76■□□□□ 0.75
LMNA-201ENST00000347559 PER1O15534 1290 aaPredicted RBP19.76■□□□□ 0.75
LMNA-201ENST00000347559 PANK3Q9H999 370 aa19.74■□□□□ 0.75
LMNA-201ENST00000347559 IGHDP01880 384 aa19.73■□□□□ 0.75
LMNA-201ENST00000347559 WDR43Q15061 677 aaKnown RBP eCLIP19.73■□□□□ 0.75
LMNA-201ENST00000347559 RRP9O43818 475 aaKnown RBP19.73■□□□□ 0.75
LMNA-201ENST00000347559 CLCN1P35523 988 aa19.72■□□□□ 0.75
LMNA-201ENST00000347559 GOLGA2Q08379 1002 aa19.72■□□□□ 0.75
LMNA-201ENST00000347559 TOPBP1Q92547 1522 aa19.72■□□□□ 0.75
LMNA-201ENST00000347559 BLMP54132 1417 aaPredicted RBP19.72■□□□□ 0.75
LMNA-201ENST00000347559 PLEKHH1Q9ULM0 1364 aa19.71■□□□□ 0.75
LMNA-201ENST00000347559 BCAR3O75815 825 aa19.71■□□□□ 0.75
LMNA-201ENST00000347559 RGL3Q3MIN7 710 aa19.7■□□□□ 0.74
LMNA-201ENST00000347559 NESP48681 1621 aa19.7■□□□□ 0.74
LMNA-201ENST00000347559 CFDP1Q9UEE9 299 aaPredicted RBP19.7■□□□□ 0.74
LMNA-201ENST00000347559 NUP155O75694 1391 aa19.69■□□□□ 0.74
LMNA-201ENST00000347559 UHRF1BP1Q6BDS2 1440 aa19.69■□□□□ 0.74
LMNA-201ENST00000347559 NBPF1Q3BBV0 1214 aa19.69■□□□□ 0.74
LMNA-201ENST00000347559 DNMBPQ6XZF7 1577 aa19.68■□□□□ 0.74
LMNA-201ENST00000347559 ZMYM4Q5VZL5 1548 aa19.68■□□□□ 0.74
LMNA-201ENST00000347559 ANTXR1Q9H6X2 564 aa19.67■□□□□ 0.74
LMNA-201ENST00000347559 UPF2Q9HAU5 1272 aaKnown RBP19.67■□□□□ 0.74
LMNA-201ENST00000347559 DNMT1P26358 1616 aaKnown RBP19.67■□□□□ 0.74
LMNA-201ENST00000347559 CCDC146Q8IYE0 955 aa19.67■□□□□ 0.74
LMNA-201ENST00000347559 TBC1D2Q9BYX2 928 aa19.65■□□□□ 0.74
LMNA-201ENST00000347559 CANXP27824 592 aaKnown RBP19.65■□□□□ 0.74
LMNA-201ENST00000347559 MCM4P33991 863 aa19.64■□□□□ 0.73
LMNA-201ENST00000347559 PLEKHH2Q8IVE3 1493 aa19.63■□□□□ 0.73
LMNA-201ENST00000347559 FSD2A1L4K1 749 aa19.63■□□□□ 0.73
LMNA-201ENST00000347559 MYH16Q9H6N6 1097 aa19.62■□□□□ 0.73
LMNA-201ENST00000347559 SPINK5Q9NQ38 1064 aaPredicted RBP19.62■□□□□ 0.73
LMNA-201ENST00000347559 COG6Q9Y2V7 657 aa19.62■□□□□ 0.73
LMNA-201ENST00000347559 GAPVD1Q14C86 1478 aa19.62■□□□□ 0.73
LMNA-201ENST00000347559 KIAA0586Q9BVV6 1533 aa19.61■□□□□ 0.73
LMNA-201ENST00000347559 TRAK2O60296 914 aa19.61■□□□□ 0.73
LMNA-201ENST00000347559 SLFN5Q08AF3 891 aa19.61■□□□□ 0.73
LMNA-201ENST00000347559 E9PCH4 1651 aa19.61■□□□□ 0.73
LMNA-201ENST00000347559 DISP3Q9P2K9 1392 aa19.6■□□□□ 0.73
LMNA-201ENST00000347559 PANK1Q8TE04 598 aa19.6■□□□□ 0.73
LMNA-201ENST00000347559 MAPK8IP3Q9UPT6 1336 aa19.6■□□□□ 0.73
LMNA-201ENST00000347559 ESPNB1AK53 854 aa19.6■□□□□ 0.73
LMNA-201ENST00000347559 ANKRD50Q9ULJ7 1429 aa19.59■□□□□ 0.73
LMNA-201ENST00000347559 MRE11P49959 708 aa19.58■□□□□ 0.72
LMNA-201ENST00000347559 TRIM44Q96DX7 344 aaPredicted RBP19.58■□□□□ 0.72
LMNA-201ENST00000347559 ANKRD30AQ9BXX3 1397 aa19.58■□□□□ 0.72
LMNA-201ENST00000347559 ERBB4Q15303 1308 aa19.57■□□□□ 0.72
LMNA-201ENST00000347559 EIF3AQ14152 1382 aaKnown RBP19.57■□□□□ 0.72
LMNA-201ENST00000347559 APAF1O14727 1248 aa19.57■□□□□ 0.72
LMNA-201ENST00000347559 PPP2R1AP30153 589 aa19.57■□□□□ 0.72
LMNA-201ENST00000347559 CLUAP1Q96AJ1 413 aa19.57■□□□□ 0.72
LMNA-201ENST00000347559 GRPEL1Q9HAV7 217 aa19.56■□□□□ 0.72
LMNA-201ENST00000347559 TBC1D32Q96NH3 1257 aa19.56■□□□□ 0.72
LMNA-201ENST00000347559 KNSTRNQ9Y448 316 aa19.56■□□□□ 0.72
LMNA-201ENST00000347559 ZNF521Q96K83 1311 aa19.55■□□□□ 0.72
LMNA-201ENST00000347559 ZNF608Q9ULD9 1512 aaPredicted RBP19.55■□□□□ 0.72
LMNA-201ENST00000347559 INSRP06213 1382 aa19.54■□□□□ 0.72
LMNA-201ENST00000347559 TMF1P82094 1093 aa19.54■□□□□ 0.72
LMNA-201ENST00000347559 CAMSAP2Q08AD1 1489 aa19.54■□□□□ 0.72
LMNA-201ENST00000347559 TESK2Q96S53 571 aa19.53■□□□□ 0.72
LMNA-201ENST00000347559 ARHGEF12Q9NZN5 1544 aa19.53■□□□□ 0.72
LMNA-201ENST00000347559 CGNL1Q0VF96 1302 aa19.53■□□□□ 0.72
LMNA-201ENST00000347559 WDR62O43379 1518 aa19.53■□□□□ 0.72
LMNA-201ENST00000347559 KIF21AQ7Z4S6 1674 aa19.52■□□□□ 0.72
LMNA-201ENST00000347559 LAMC3Q9Y6N6 1575 aa19.52■□□□□ 0.72
LMNA-201ENST00000347559 CHMP5Q9NZZ3 219 aa19.51■□□□□ 0.71
LMNA-201ENST00000347559 DMRT2Q9Y5R5 561 aa19.51■□□□□ 0.71
LMNA-201ENST00000347559 PRG4Q92954 1404 aaPredicted RBP19.5■□□□□ 0.71
LMNA-201ENST00000347559 NLRP1Q9C000 1473 aa19.5■□□□□ 0.71
LMNA-201ENST00000347559 MFAP1P55081 439 aaKnown RBP19.5■□□□□ 0.71
LMNA-201ENST00000347559 PDZRN3Q9UPQ7 1066 aa19.49■□□□□ 0.71
LMNA-201ENST00000347559 NKTRP30414 1462 aaKnown RBP19.48■□□□□ 0.71
LMNA-201ENST00000347559 CENPJQ9HC77 1338 aaPredicted RBP19.48■□□□□ 0.71
LMNA-201ENST00000347559 ERBINQ96RT1 1412 aa19.47■□□□□ 0.71
LMNA-201ENST00000347559 COL17A1Q9UMD9 1497 aaPredicted RBP19.47■□□□□ 0.71
LMNA-201ENST00000347559 E9PSI1 815 aa19.46■□□□□ 0.71
LMNA-201ENST00000347559 PDE3AQ14432 1141 aa19.46■□□□□ 0.71
LMNA-201ENST00000347559 PRAG1Q86YV5 1406 aa19.45■□□□□ 0.7
LMNA-201ENST00000347559 NEUROD2Q15784 382 aa19.45■□□□□ 0.7
LMNA-201ENST00000347559 TRMT2AQ8IZ69 625 aaKnown RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms