RNA–Protein interactions for RNA: ENST00000344337.10

KPNA1-201, Transcript of karyopherin subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA1, Length 6,830 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-201ENST00000344337 BAZ1AQ9NRL2 1556 aaPredicted RBP9.85□□□□□ -0.83
KPNA1-201ENST00000344337 RNF214Q8ND24 703 aa9.85□□□□□ -0.83
KPNA1-201ENST00000344337 USP47Q96K76 1375 aa9.85□□□□□ -0.83
KPNA1-201ENST00000344337 FBXW7Q969H0 707 aa9.85□□□□□ -0.83
KPNA1-201ENST00000344337 TRIM6-TRIM34B2RNG4 842 aa9.85□□□□□ -0.83
KPNA1-201ENST00000344337 NBPF1Q3BBV0 1214 aa9.84□□□□□ -0.83
KPNA1-201ENST00000344337 C1orf115Q9H7X2 142 aa9.84□□□□□ -0.83
KPNA1-201ENST00000344337 DDX49Q9Y6V7 483 aaKnown RBP9.84□□□□□ -0.83
KPNA1-201ENST00000344337 CENPJQ9HC77 1338 aaPredicted RBP9.84□□□□□ -0.83
KPNA1-201ENST00000344337 FGD1P98174 961 aa9.83□□□□□ -0.84
KPNA1-201ENST00000344337 CCDC18Q5T9S5 1454 aa9.83□□□□□ -0.84
KPNA1-201ENST00000344337 CCDC7Q96M83 1385 aa9.82□□□□□ -0.84
KPNA1-201ENST00000344337 MYBBP1AQ9BQG0 1328 aaKnown RBP9.81□□□□□ -0.84
KPNA1-201ENST00000344337 FOSBP53539 338 aa9.81□□□□□ -0.84
KPNA1-201ENST00000344337 LTV1Q96GA3 475 aaPredicted RBP9.81□□□□□ -0.84
KPNA1-201ENST00000344337 RALBP1Q15311 655 aa9.81□□□□□ -0.84
KPNA1-201ENST00000344337 FHAD1B1AJZ9 1412 aa9.81□□□□□ -0.84
KPNA1-201ENST00000344337 CALD1Q05682 793 aaKnown RBP9.81□□□□□ -0.84
KPNA1-201ENST00000344337 CASC1Q6TDU7 716 aa9.8□□□□□ -0.84
KPNA1-201ENST00000344337 RILPL2Q969X0 211 aa9.8□□□□□ -0.84
KPNA1-201ENST00000344337 FMN1Q68DA7 1419 aa9.8□□□□□ -0.84
KPNA1-201ENST00000344337 RWDD1Q9H446 243 aaPredicted RBP9.8□□□□□ -0.84
KPNA1-201ENST00000344337 R3HCC1Q9Y3T6 440 aaKnown RBP9.8□□□□□ -0.84
KPNA1-201ENST00000344337 KIF21BO75037 1637 aa9.8□□□□□ -0.84
KPNA1-201ENST00000344337 MCTP1Q6DN14 999 aa9.79□□□□□ -0.84
KPNA1-201ENST00000344337 CENPQQ7L2Z9 268 aaPredicted RBP9.79□□□□□ -0.84
KPNA1-201ENST00000344337 BACH2Q9BYV9 841 aa9.79□□□□□ -0.84
KPNA1-201ENST00000344337 CDK11BP21127 795 aaKnown RBP9.79□□□□□ -0.84
KPNA1-201ENST00000344337 ARAP1Q96P48 1450 aa9.79□□□□□ -0.84
KPNA1-201ENST00000344337 HMOX1P09601 288 aa9.78□□□□□ -0.84
KPNA1-201ENST00000344337 ZBTB9Q96C00 473 aa9.78□□□□□ -0.84
KPNA1-201ENST00000344337 GBP4Q96PP9 640 aa9.78□□□□□ -0.84
KPNA1-201ENST00000344337 ZNF330Q9Y3S2 320 aaPredicted RBP9.78□□□□□ -0.84
KPNA1-201ENST00000344337 PRDM10Q9NQV6 1147 aa9.78□□□□□ -0.84
KPNA1-201ENST00000344337 GOLGA6L4A6NEF3 574 aa9.78□□□□□ -0.84
KPNA1-201ENST00000344337 TSR2Q969E8 191 aaKnown RBP9.78□□□□□ -0.84
KPNA1-201ENST00000344337 KDM4AO75164 1064 aa9.78□□□□□ -0.84
KPNA1-201ENST00000344337 NPM1P06748 294 aaKnown RBP eCLIP9.78□□□□□ -0.84
KPNA1-201ENST00000344337 ZNF592Q92610 1267 aa9.77□□□□□ -0.84
KPNA1-201ENST00000344337 TMEM132EQ6IEE7 984 aa9.77□□□□□ -0.85
KPNA1-201ENST00000344337 CDCA8Q53HL2 280 aa9.76□□□□□ -0.85
KPNA1-201ENST00000344337 ZRSR1Q15695 479 aaKnown RBP9.76□□□□□ -0.85
KPNA1-201ENST00000344337 KIF3BO15066 747 aa9.76□□□□□ -0.85
KPNA1-201ENST00000344337 CREBRFQ8IUR6 639 aa9.76□□□□□ -0.85
KPNA1-201ENST00000344337 RSPH6AQ9H0K4 717 aa9.76□□□□□ -0.85
KPNA1-201ENST00000344337 KIF15Q9NS87 1388 aa9.75□□□□□ -0.85
KPNA1-201ENST00000344337 NPHP1O15259 732 aa9.75□□□□□ -0.85
KPNA1-201ENST00000344337 PKNOX2Q96KN3 472 aa9.75□□□□□ -0.85
KPNA1-201ENST00000344337 USP35Q9P2H5 1018 aa9.75□□□□□ -0.85
KPNA1-201ENST00000344337 TRAK2O60296 914 aa9.74□□□□□ -0.85
KPNA1-201ENST00000344337 PNISRQ8TF01 805 aaKnown RBP9.74□□□□□ -0.85
KPNA1-201ENST00000344337 NGEFQ8N5V2 710 aa9.74□□□□□ -0.85
KPNA1-201ENST00000344337 PMFBP1Q8TBY8 1022 aa9.74□□□□□ -0.85
KPNA1-201ENST00000344337 PDE4CQ08493 712 aa9.73□□□□□ -0.85
KPNA1-201ENST00000344337 CAVIN1Q6NZI2 390 aaKnown RBP9.73□□□□□ -0.85
KPNA1-201ENST00000344337 DTNBO60941 627 aa9.73□□□□□ -0.85
KPNA1-201ENST00000344337 C22orf23Q9BZE7 217 aa9.73□□□□□ -0.85
KPNA1-201ENST00000344337 CNTLNQ9NXG0 1405 aa9.73□□□□□ -0.85
KPNA1-201ENST00000344337 CCDC27Q2M243 656 aa9.72□□□□□ -0.85
KPNA1-201ENST00000344337 PANK2Q9BZ23 570 aa9.72□□□□□ -0.85
KPNA1-201ENST00000344337 PDZRN3Q9UPQ7 1066 aa9.72□□□□□ -0.85
KPNA1-201ENST00000344337 LARP6Q9BRS8 491 aaKnown RBP9.72□□□□□ -0.85
KPNA1-201ENST00000344337 GGNBP2Q9H3C7 697 aa9.72□□□□□ -0.85
KPNA1-201ENST00000344337 HSP90B1P14625 803 aaKnown RBP9.71□□□□□ -0.85
KPNA1-201ENST00000344337 MINK1Q8N4C8 1332 aaPredicted RBP9.71□□□□□ -0.85
KPNA1-201ENST00000344337 FAM43AQ8N2R8 423 aa9.71□□□□□ -0.85
KPNA1-201ENST00000344337 KIAA2012Q0VF49 1180 aa9.71□□□□□ -0.86
KPNA1-201ENST00000344337 CHAF1AQ13111 956 aaPredicted RBP9.7□□□□□ -0.86
KPNA1-201ENST00000344337 MAP4K4O95819 1239 aaPredicted RBP9.7□□□□□ -0.86
KPNA1-201ENST00000344337 STK11IPQ8N1F8 1099 aa9.7□□□□□ -0.86
KPNA1-201ENST00000344337 RAD54L2Q9Y4B4 1467 aa9.7□□□□□ -0.86
KPNA1-201ENST00000344337 SKIDA1Q1XH10 827 aa9.7□□□□□ -0.86
KPNA1-201ENST00000344337 TOP2AP11388 1531 aaKnown RBP9.69□□□□□ -0.86
KPNA1-201ENST00000344337 PDS5BQ9NTI5 1447 aa9.69□□□□□ -0.86
KPNA1-201ENST00000344337 SPC24Q8NBT2 197 aa9.69□□□□□ -0.86
KPNA1-201ENST00000344337 DDX54Q8TDD1 881 aaKnown RBP9.68□□□□□ -0.86
KPNA1-201ENST00000344337 TNNQ9UQP3 1299 aa9.68□□□□□ -0.86
KPNA1-201ENST00000344337 FBLN1P23142 703 aa9.68□□□□□ -0.86
KPNA1-201ENST00000344337 RIPK4P57078 832 aa9.68□□□□□ -0.86
KPNA1-201ENST00000344337 CCAR2Q8N163 923 aaKnown RBP9.68□□□□□ -0.86
KPNA1-201ENST00000344337 PRPF40AO75400 957 aaKnown RBP9.68□□□□□ -0.86
KPNA1-201ENST00000344337 NUTM2GQ5VZR2 741 aa9.68□□□□□ -0.86
KPNA1-201ENST00000344337 CABP2Q9NPB3 220 aa9.68□□□□□ -0.86
KPNA1-201ENST00000344337 CFTRP13569 1480 aa9.68□□□□□ -0.86
KPNA1-201ENST00000344337 SYNJ1O43426 1573 aa9.68□□□□□ -0.86
KPNA1-201ENST00000344337 MTHFSP49914 203 aa9.68□□□□□ -0.86
KPNA1-201ENST00000344337 THUMPD2Q9BTF0 503 aaKnown RBP9.68□□□□□ -0.86
KPNA1-201ENST00000344337 EIF2S2P20042 333 aaKnown RBP9.67□□□□□ -0.86
KPNA1-201ENST00000344337 PDE3BQ13370 1112 aa9.67□□□□□ -0.86
KPNA1-201ENST00000344337 MS4A1P11836 297 aa9.67□□□□□ -0.86
KPNA1-201ENST00000344337 NASPP49321 788 aaPredicted RBP9.67□□□□□ -0.86
KPNA1-201ENST00000344337 IPO8O15397 1037 aaKnown RBP9.67□□□□□ -0.86
KPNA1-201ENST00000344337 ZKSCAN2Q63HK3 967 aa9.67□□□□□ -0.86
KPNA1-201ENST00000344337 KIAA1211Q6ZU35 1233 aa9.67□□□□□ -0.86
KPNA1-201ENST00000344337 SEC24BO95487 1268 aa9.66□□□□□ -0.86
KPNA1-201ENST00000344337 SLC12A5Q9H2X9 1139 aa9.66□□□□□ -0.86
KPNA1-201ENST00000344337 NACADO15069 1562 aa9.66□□□□□ -0.86
KPNA1-201ENST00000344337 SMARCA2P51531 1590 aa9.66□□□□□ -0.86
KPNA1-201ENST00000344337 DZIP1LQ8IYY4 767 aaKnown RBP9.66□□□□□ -0.86
KPNA1-201ENST00000344337 RTF1Q92541 710 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms