RNA–Protein interactions for RNA: ENST00000341547.8

LMO7-202, Transcript of LIM domain 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LMO7, Length 7,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-202ENST00000341547 MYBBP1AQ9BQG0 1328 aaKnown RBP9.24□□□□□ -0.93
LMO7-202ENST00000341547 CHMP5Q9NZZ3 219 aa9.24□□□□□ -0.93
LMO7-202ENST00000341547 KANK4Q5T7N3 995 aaPredicted RBP9.24□□□□□ -0.93
LMO7-202ENST00000341547 PRM3Q9NNZ6 103 aa9.24□□□□□ -0.93
LMO7-202ENST00000341547 PES1O00541 588 aaKnown RBP9.24□□□□□ -0.93
LMO7-202ENST00000341547 NLRP13Q86W25 1043 aa9.23□□□□□ -0.93
LMO7-202ENST00000341547 SMC4Q9NTJ3 1288 aa9.23□□□□□ -0.93
LMO7-202ENST00000341547 U2AF1L5P0DN76 240 aaPredicted RBP9.23□□□□□ -0.93
LMO7-202ENST00000341547 U2AF1Q01081 240 aaKnown RBP eCLIP9.23□□□□□ -0.936e-8■■□□□ 13.4
LMO7-202ENST00000341547 CCDC146Q8IYE0 955 aa9.23□□□□□ -0.93
LMO7-202ENST00000341547 KIF16BQ96L93 1317 aa9.23□□□□□ -0.93
LMO7-202ENST00000341547 PRKRIP1Q9H875 184 aaPredicted RBP9.22□□□□□ -0.93
LMO7-202ENST00000341547 TPM3P06753 285 aa9.22□□□□□ -0.93
LMO7-202ENST00000341547 GOLGA6L19H0YKK7 550 aa9.22□□□□□ -0.93
LMO7-202ENST00000341547 PLIN1O60240 522 aa9.22□□□□□ -0.93
LMO7-202ENST00000341547 ST18O60284 1047 aa9.22□□□□□ -0.93
LMO7-202ENST00000341547 CRBNQ96SW2 442 aa9.22□□□□□ -0.93
LMO7-202ENST00000341547 SF3A1Q15459 793 aaKnown RBP9.21□□□□□ -0.93
LMO7-202ENST00000341547 CENPJQ9HC77 1338 aaPredicted RBP9.21□□□□□ -0.93
LMO7-202ENST00000341547 SLC4A10Q6U841 1118 aa9.21□□□□□ -0.94
LMO7-202ENST00000341547 CCDC88BA6NC98 1476 aa9.21□□□□□ -0.94
LMO7-202ENST00000341547 ABCC8Q09428 1581 aa9.21□□□□□ -0.94
LMO7-202ENST00000341547 TEX35Q5T0J7 233 aa9.2□□□□□ -0.94
LMO7-202ENST00000341547 RASSF8Q8NHQ8 419 aa9.2□□□□□ -0.94
LMO7-202ENST00000341547 CHMP3Q9Y3E7 222 aa9.2□□□□□ -0.94
LMO7-202ENST00000341547 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.2□□□□□ -0.94
LMO7-202ENST00000341547 CCDC39Q9UFE4 941 aa9.2□□□□□ -0.94
LMO7-202ENST00000341547 STK26Q9P289 416 aa9.2□□□□□ -0.94
LMO7-202ENST00000341547 EIF3AQ14152 1382 aaKnown RBP9.19□□□□□ -0.94
LMO7-202ENST00000341547 ZNF330Q9Y3S2 320 aaPredicted RBP9.19□□□□□ -0.94
LMO7-202ENST00000341547 MPHOSPH9Q99550 1183 aa9.19□□□□□ -0.94
LMO7-202ENST00000341547 CALRP27797 417 aaKnown RBP9.19□□□□□ -0.94
LMO7-202ENST00000341547 PAK3O75914 559 aaPredicted RBP9.18□□□□□ -0.94
LMO7-202ENST00000341547 CCDC34Q96HJ3 373 aa9.18□□□□□ -0.94
LMO7-202ENST00000341547 CCDC66A2RUB6 948 aa9.18□□□□□ -0.94
LMO7-202ENST00000341547 BECN2A8MW95 431 aa9.18□□□□□ -0.94
LMO7-202ENST00000341547 GPS2Q13227 327 aa9.18□□□□□ -0.94
LMO7-202ENST00000341547 TPD52L1Q16890 204 aaPredicted RBP9.18□□□□□ -0.94
LMO7-202ENST00000341547 CNTLNQ9NXG0 1405 aa9.18□□□□□ -0.94
LMO7-202ENST00000341547 CCDC173Q0VFZ6 552 aa9.18□□□□□ -0.94
LMO7-202ENST00000341547 CGNL1Q0VF96 1302 aa9.18□□□□□ -0.94
LMO7-202ENST00000341547 R3HCC1Q9Y3T6 440 aaKnown RBP9.18□□□□□ -0.94
LMO7-202ENST00000341547 GORABQ5T7V8 394 aa9.18□□□□□ -0.94
LMO7-202ENST00000341547 NACADO15069 1562 aa9.18□□□□□ -0.94
LMO7-202ENST00000341547 MSH5O43196 834 aa9.17□□□□□ -0.94
LMO7-202ENST00000341547 RILPL2Q969X0 211 aa9.17□□□□□ -0.94
LMO7-202ENST00000341547 GPATCH3Q96I76 525 aa9.17□□□□□ -0.94
LMO7-202ENST00000341547 FBXO3Q9UK99 471 aa9.17□□□□□ -0.94
LMO7-202ENST00000341547 H3BQV1 296 aa9.17□□□□□ -0.94
LMO7-202ENST00000341547 NOM1Q5C9Z4 860 aaKnown RBP9.17□□□□□ -0.94
LMO7-202ENST00000341547 IFFO2Q5TF58 517 aa9.17□□□□□ -0.94
LMO7-202ENST00000341547 CEP89Q96ST8 783 aa9.17□□□□□ -0.94
LMO7-202ENST00000341547 BCL2L13Q9BXK5 485 aa9.17□□□□□ -0.94
LMO7-202ENST00000341547 TSR1Q2NL82 804 aaKnown RBP9.16□□□□□ -0.94
LMO7-202ENST00000341547 ANKRD45Q5TZF3 282 aa9.16□□□□□ -0.94
LMO7-202ENST00000341547 DIAPH3Q9NSV4 1193 aa9.16□□□□□ -0.94
LMO7-202ENST00000341547 WWC1Q8IX03 1113 aa9.16□□□□□ -0.94
LMO7-202ENST00000341547 HOMER1Q86YM7 354 aa9.15□□□□□ -0.94
LMO7-202ENST00000341547 NASPP49321 788 aaPredicted RBP9.15□□□□□ -0.94
LMO7-202ENST00000341547 TAF3Q5VWG9 929 aa9.15□□□□□ -0.94
LMO7-202ENST00000341547 CCDC9Q9Y3X0 531 aaKnown RBP9.15□□□□□ -0.94
LMO7-202ENST00000341547 TAF7LQ5H9L4 462 aa9.14□□□□□ -0.95
LMO7-202ENST00000341547 FAM184AQ8NB25 1140 aa9.14□□□□□ -0.95
LMO7-202ENST00000341547 L3MBTL2Q969R5 705 aa9.14□□□□□ -0.95
LMO7-202ENST00000341547 AAMPQ13685 434 aa9.14□□□□□ -0.95
LMO7-202ENST00000341547 ATP6V1DQ9Y5K8 247 aa9.14□□□□□ -0.95
LMO7-202ENST00000341547 E9PSI1 815 aa9.14□□□□□ -0.95
LMO7-202ENST00000341547 HMMRO75330 724 aa9.14□□□□□ -0.95
LMO7-202ENST00000341547 MCTP1Q6DN14 999 aa9.14□□□□□ -0.95
LMO7-202ENST00000341547 RRP7AQ9Y3A4 280 aaKnown RBP9.14□□□□□ -0.95
LMO7-202ENST00000341547 CARMIL1Q5VZK9 1371 aa9.14□□□□□ -0.95
LMO7-202ENST00000341547 FBXW7Q969H0 707 aa9.13□□□□□ -0.95
LMO7-202ENST00000341547 TRAK2O60296 914 aa9.13□□□□□ -0.95
LMO7-202ENST00000341547 NUCB2P80303 420 aa9.13□□□□□ -0.95
LMO7-202ENST00000341547 STK31Q9BXU1 1019 aa9.13□□□□□ -0.95
LMO7-202ENST00000341547 TOMM22Q9NS69 142 aa9.13□□□□□ -0.95
LMO7-202ENST00000341547 FRAT2O75474 233 aaPredicted RBP9.13□□□□□ -0.95
LMO7-202ENST00000341547 APPP05067 770 aa9.12□□□□□ -0.95
LMO7-202ENST00000341547 HMGN5P82970 282 aaKnown RBP9.12□□□□□ -0.95
LMO7-202ENST00000341547 CCDC70Q6NSX1 233 aa9.12□□□□□ -0.95
LMO7-202ENST00000341547 PKD2Q13563 968 aa9.12□□□□□ -0.95
LMO7-202ENST00000341547 CWC15Q9P013 229 aaKnown RBP9.12□□□□□ -0.95
LMO7-202ENST00000341547 RBM10P98175 930 aaKnown RBP9.12□□□□□ -0.95
LMO7-202ENST00000341547 BACH2Q9BYV9 841 aa9.11□□□□□ -0.95
LMO7-202ENST00000341547 SMG6Q86US8 1419 aaKnown RBP9.11□□□□□ -0.95
LMO7-202ENST00000341547 HDGFL2Q7Z4V5 671 aaPredicted RBP9.11□□□□□ -0.95
LMO7-202ENST00000341547 ARGLU1Q9NWB6 273 aaPredicted RBP9.11□□□□□ -0.95
LMO7-202ENST00000341547 TPM1P09493 284 aa9.11□□□□□ -0.95
LMO7-202ENST00000341547 IFT57Q9NWB7 429 aa9.11□□□□□ -0.95
LMO7-202ENST00000341547 CECR2Q9BXF3 1484 aa9.11□□□□□ -0.95
LMO7-202ENST00000341547 CCDC18Q5T9S5 1454 aa9.11□□□□□ -0.95
LMO7-202ENST00000341547 CCDC7Q96M83 1385 aa9.1□□□□□ -0.95
LMO7-202ENST00000341547 KIF3AQ9Y496 699 aa9.1□□□□□ -0.95
LMO7-202ENST00000341547 ELL2O00472 640 aaPredicted RBP9.1□□□□□ -0.95
LMO7-202ENST00000341547 TOP2AP11388 1531 aaKnown RBP9.1□□□□□ -0.95
LMO7-202ENST00000341547 VPS53Q5VIR6 699 aa9.1□□□□□ -0.95
LMO7-202ENST00000341547 NGEFQ8N5V2 710 aa9.1□□□□□ -0.95
LMO7-202ENST00000341547 SPAG9O60271 1321 aaKnown RBP9.1□□□□□ -0.95
LMO7-202ENST00000341547 COG6Q9Y2V7 657 aa9.1□□□□□ -0.95
LMO7-202ENST00000341547 MARCH6O60337 910 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms