RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 PKD2Q13563 968 aa14.41□□□□□ -0.1
CAPRIN1-201ENST00000341394 ARAP3Q8WWN8 1544 aa14.41□□□□□ -0.1
CAPRIN1-201ENST00000341394 EIF5BO60841 1220 aaKnown RBP14.41□□□□□ -0.1
CAPRIN1-201ENST00000341394 ADGRL1O94910 1474 aa14.41□□□□□ -0.1
CAPRIN1-201ENST00000341394 SCAPERQ9BY12 1400 aa14.4□□□□□ -0.1
CAPRIN1-201ENST00000341394 RTN4Q9NQC3 1192 aaKnown RBP14.39□□□□□ -0.11
CAPRIN1-201ENST00000341394 CD109Q6YHK3 1445 aa14.39□□□□□ -0.11
CAPRIN1-201ENST00000341394 ANP32EQ9BTT0 268 aa14.39□□□□□ -0.11
CAPRIN1-201ENST00000341394 L3MBTL2Q969R5 705 aa14.37□□□□□ -0.11
CAPRIN1-201ENST00000341394 FAM135AQ9P2D6 1515 aa14.37□□□□□ -0.11
CAPRIN1-201ENST00000341394 INO80Q9ULG1 1556 aaPredicted RBP14.37□□□□□ -0.11
CAPRIN1-201ENST00000341394 KIDINS220Q9ULH0 1771 aa14.37□□□□□ -0.11
CAPRIN1-201ENST00000341394 ARXQ96QS3 562 aa14.37□□□□□ -0.11
CAPRIN1-201ENST00000341394 RPRD2Q5VT52 1461 aaKnown RBP14.36□□□□□ -0.11
CAPRIN1-201ENST00000341394 TSPOAP1O95153 1857 aa14.36□□□□□ -0.11
CAPRIN1-201ENST00000341394 TEX14Q8IWB6 1497 aa14.36□□□□□ -0.11
CAPRIN1-201ENST00000341394 KDM5DQ9BY66 1539 aa14.36□□□□□ -0.11
CAPRIN1-201ENST00000341394 UNC13BO14795 1591 aa14.35□□□□□ -0.11
CAPRIN1-201ENST00000341394 ATP7AQ04656 1500 aa14.35□□□□□ -0.11
CAPRIN1-201ENST00000341394 TRHP20396 242 aaPredicted RBP14.34□□□□□ -0.11
CAPRIN1-201ENST00000341394 DUOX2Q9NRD8 1548 aa14.33□□□□□ -0.11
CAPRIN1-201ENST00000341394 RAPGEF3O95398 923 aa14.33□□□□□ -0.12
CAPRIN1-201ENST00000341394 KIF3BO15066 747 aa14.33□□□□□ -0.12
CAPRIN1-201ENST00000341394 NBPF8Q3BBV2 869 aa14.33□□□□□ -0.12
CAPRIN1-201ENST00000341394 MAP3K4Q9Y6R4 1608 aa14.33□□□□□ -0.12
CAPRIN1-201ENST00000341394 PLA2R1Q13018 1463 aa14.31□□□□□ -0.12
CAPRIN1-201ENST00000341394 DIP2BQ9P265 1576 aa14.31□□□□□ -0.12
CAPRIN1-201ENST00000341394 IQGAP3Q86VI3 1631 aa14.3□□□□□ -0.12
CAPRIN1-201ENST00000341394 TIMELESSQ9UNS1 1208 aa14.3□□□□□ -0.12
CAPRIN1-201ENST00000341394 MAGI2Q86UL8 1455 aa14.3□□□□□ -0.12
CAPRIN1-201ENST00000341394 PPRC1Q5VV67 1664 aaKnown RBP14.29□□□□□ -0.12
CAPRIN1-201ENST00000341394 GGT6Q6P531 493 aa14.29□□□□□ -0.12
CAPRIN1-201ENST00000341394 ERBINQ96RT1 1412 aa14.29□□□□□ -0.12
CAPRIN1-201ENST00000341394 MROH1Q8NDA8 1641 aa14.28□□□□□ -0.12
CAPRIN1-201ENST00000341394 RTEL1-TNFRSF6BF6WH68 1400 aa14.28□□□□□ -0.12
CAPRIN1-201ENST00000341394 POGZQ7Z3K3 1410 aa14.28□□□□□ -0.12
CAPRIN1-201ENST00000341394 TSHZ2Q9NRE2 1034 aa14.28□□□□□ -0.12
CAPRIN1-201ENST00000341394 KDM2AQ9Y2K7 1162 aa14.28□□□□□ -0.12
CAPRIN1-201ENST00000341394 KDM5CP41229 1560 aa14.27□□□□□ -0.12
CAPRIN1-201ENST00000341394 FRMPD1Q5SYB0 1578 aa14.27□□□□□ -0.12
CAPRIN1-201ENST00000341394 ABCA6Q8N139 1617 aa14.27□□□□□ -0.13
CAPRIN1-201ENST00000341394 RGL3Q3MIN7 710 aa14.27□□□□□ -0.13
CAPRIN1-201ENST00000341394 E9PCH4 1651 aa14.27□□□□□ -0.13
CAPRIN1-201ENST00000341394 KIF13AQ9H1H9 1805 aa14.27□□□□□ -0.13
CAPRIN1-201ENST00000341394 ZNF518AQ6AHZ1 1483 aa14.26□□□□□ -0.13
CAPRIN1-201ENST00000341394 RICTORQ6R327 1708 aa14.26□□□□□ -0.13
CAPRIN1-201ENST00000341394 DEPDC5O75140 1603 aa14.26□□□□□ -0.13
CAPRIN1-201ENST00000341394 CFAP65Q6ZU64 1925 aaKnown RBP14.26□□□□□ -0.13
CAPRIN1-201ENST00000341394 B4GALNT3Q6L9W6 998 aa14.24□□□□□ -0.13
CAPRIN1-201ENST00000341394 KANK1Q14678 1352 aa14.23□□□□□ -0.13
CAPRIN1-201ENST00000341394 CFAP74Q9C0B2 1584 aa14.23□□□□□ -0.13
CAPRIN1-201ENST00000341394 HECW2Q9P2P5 1572 aa14.23□□□□□ -0.13
CAPRIN1-201ENST00000341394 YEATS2Q9ULM3 1422 aa14.22□□□□□ -0.13
CAPRIN1-201ENST00000341394 GLI2P10070 1586 aa14.22□□□□□ -0.13
CAPRIN1-201ENST00000341394 CHGAP10645 457 aaKnown RBP14.22□□□□□ -0.13
CAPRIN1-201ENST00000341394 MRS2Q9HD23 443 aa14.22□□□□□ -0.13
CAPRIN1-201ENST00000341394 RBM19Q9Y4C8 960 aaKnown RBP14.22□□□□□ -0.13
CAPRIN1-201ENST00000341394 ANP32AP39687 249 aaKnown RBP14.22□□□□□ -0.13
CAPRIN1-201ENST00000341394 CEP152O94986 1710 aa14.21□□□□□ -0.13
CAPRIN1-201ENST00000341394 DHX29Q7Z478 1369 aaKnown RBP14.21□□□□□ -0.13
CAPRIN1-201ENST00000341394 NEO1Q92859 1461 aa14.2□□□□□ -0.14
CAPRIN1-201ENST00000341394 UGGT1Q9NYU2 1555 aa14.2□□□□□ -0.14
CAPRIN1-201ENST00000341394 MLECQ14165 292 aa14.2□□□□□ -0.14
CAPRIN1-201ENST00000341394 CCDC136Q96JN2 1154 aa14.2□□□□□ -0.14
CAPRIN1-201ENST00000341394 VWDEQ8N2E2 1590 aa14.19□□□□□ -0.14
CAPRIN1-201ENST00000341394 A2MP01023 1474 aa14.19□□□□□ -0.14
CAPRIN1-201ENST00000341394 SIGLEC1Q9BZZ2 1709 aa14.19□□□□□ -0.14
CAPRIN1-201ENST00000341394 C11orf95C9JLR9 678 aaPredicted RBP14.19□□□□□ -0.14
CAPRIN1-201ENST00000341394 HSPA5P11021 654 aaKnown RBP14.19□□□□□ -0.14
CAPRIN1-201ENST00000341394 DIP2CQ9Y2E4 1556 aa14.19□□□□□ -0.14
CAPRIN1-201ENST00000341394 PRDM15P57071 1507 aaPredicted RBP14.18□□□□□ -0.14
CAPRIN1-201ENST00000341394 ATP10AO60312 1499 aa14.18□□□□□ -0.14
CAPRIN1-201ENST00000341394 MLH3Q9UHC1 1453 aa14.18□□□□□ -0.14
CAPRIN1-201ENST00000341394 COL17A1Q9UMD9 1497 aaPredicted RBP14.18□□□□□ -0.14
CAPRIN1-201ENST00000341394 DCAF11Q8TEB1 546 aa14.18□□□□□ -0.14
CAPRIN1-201ENST00000341394 SENP3Q9H4L4 574 aaPredicted RBP14.17□□□□□ -0.14
CAPRIN1-201ENST00000341394 ESF1Q9H501 851 aaKnown RBP14.17□□□□□ -0.14
CAPRIN1-201ENST00000341394 ARID4BQ4LE39 1312 aaPredicted RBP14.17□□□□□ -0.14
CAPRIN1-201ENST00000341394 EIF2AK4Q9P2K8 1649 aaKnown RBP14.17□□□□□ -0.14
CAPRIN1-201ENST00000341394 CCDC144AA2RUR9 1427 aa14.17□□□□□ -0.14
CAPRIN1-201ENST00000341394 WASHC2CQ9Y4E1 1318 aa14.17□□□□□ -0.14
CAPRIN1-201ENST00000341394 SPHKAPQ2M3C7 1700 aa14.16□□□□□ -0.14
CAPRIN1-201ENST00000341394 TET3O43151 1660 aa14.16□□□□□ -0.14
CAPRIN1-201ENST00000341394 CLTCL1P53675 1640 aa14.16□□□□□ -0.14
CAPRIN1-201ENST00000341394 LAS1LQ9Y4W2 734 aaKnown RBP14.15□□□□□ -0.14
CAPRIN1-201ENST00000341394 RNF17Q9BXT8 1623 aaKnown RBP14.14□□□□□ -0.15
CAPRIN1-201ENST00000341394 PLPPR3Q6T4P5 718 aa14.13□□□□□ -0.15
CAPRIN1-201ENST00000341394 WASHC2AQ641Q2 1341 aa14.13□□□□□ -0.15
CAPRIN1-201ENST00000341394 SPATA31E1Q6ZUB1 1445 aa14.13□□□□□ -0.15
CAPRIN1-201ENST00000341394 BCORL1Q5H9F3 1711 aa14.13□□□□□ -0.15
CAPRIN1-201ENST00000341394 EIF4G2P78344 907 aaKnown RBP eCLIP14.12□□□□□ -0.15
CAPRIN1-201ENST00000341394 ZBTB47Q9UFB7 747 aaPredicted RBP14.12□□□□□ -0.15
CAPRIN1-201ENST00000341394 EFCAB6Q5THR3 1501 aa14.11□□□□□ -0.15
CAPRIN1-201ENST00000341394 TRPM2O94759 1503 aa14.1□□□□□ -0.15
CAPRIN1-201ENST00000341394 NBPF1Q3BBV0 1214 aa14.1□□□□□ -0.15
CAPRIN1-201ENST00000341394 MROH2AA6NES4 1674 aa14.09□□□□□ -0.15
CAPRIN1-201ENST00000341394 PTPRTO14522 1441 aa14.09□□□□□ -0.15
CAPRIN1-201ENST00000341394 UHRF1BP1Q6BDS2 1440 aa14.09□□□□□ -0.15
CAPRIN1-201ENST00000341394 TRPM1Q7Z4N2 1603 aa14.08□□□□□ -0.15
CAPRIN1-201ENST00000341394 NPATQ14207 1427 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms