RNA–Protein interactions for RNA: ENST00000338745.10

SATB1-201, Transcript of SATB homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SATB1, Length 7,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-201ENST00000338745 H3BQV1 296 aa20.71■□□□□ 0.91
SATB1-201ENST00000338745 IFFO2Q5TF58 517 aa20.71■□□□□ 0.91
SATB1-201ENST00000338745 ZNF771Q7L3S4 317 aaPredicted RBP20.71■□□□□ 0.91
SATB1-201ENST00000338745 HMMRO75330 724 aa20.71■□□□□ 0.91
SATB1-201ENST00000338745 GGT6Q6P531 493 aa20.71■□□□□ 0.91
SATB1-201ENST00000338745 RILPL2Q969X0 211 aa20.71■□□□□ 0.91
SATB1-201ENST00000338745 TPD52L1Q16890 204 aaPredicted RBP20.7■□□□□ 0.9
SATB1-201ENST00000338745 SF3A1Q15459 793 aaKnown RBP20.7■□□□□ 0.9
SATB1-201ENST00000338745 ZNF592Q92610 1267 aa20.7■□□□□ 0.9
SATB1-201ENST00000338745 CCDC34Q96HJ3 373 aa20.69■□□□□ 0.9
SATB1-201ENST00000338745 CARMIL1Q5VZK9 1371 aa20.69■□□□□ 0.9
SATB1-201ENST00000338745 RRP7AQ9Y3A4 280 aaKnown RBP20.69■□□□□ 0.9
SATB1-201ENST00000338745 PATL2C9JE40 543 aaKnown RBP20.69■□□□□ 0.9
SATB1-201ENST00000338745 VPS8Q8N3P4 1428 aa20.68■□□□□ 0.9
SATB1-201ENST00000338745 DDX49Q9Y6V7 483 aaKnown RBP20.67■□□□□ 0.9
SATB1-201ENST00000338745 VPS53Q5VIR6 699 aa20.67■□□□□ 0.9
SATB1-201ENST00000338745 GOLGA6L19H0YKK7 550 aa20.66■□□□□ 0.9
SATB1-201ENST00000338745 NUTM2DQ5VT03 806 aaPredicted RBP20.66■□□□□ 0.9
SATB1-201ENST00000338745 USP35Q9P2H5 1018 aa20.66■□□□□ 0.9
SATB1-201ENST00000338745 PDE4AP27815 886 aa20.66■□□□□ 0.9
SATB1-201ENST00000338745 ANKRD45Q5TZF3 282 aa20.66■□□□□ 0.9
SATB1-201ENST00000338745 TOMM22Q9NS69 142 aa20.66■□□□□ 0.9
SATB1-201ENST00000338745 FAM161AQ3B820 660 aa20.65■□□□□ 0.9
SATB1-201ENST00000338745 CRBNQ96SW2 442 aa20.65■□□□□ 0.9
SATB1-201ENST00000338745 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.64■□□□□ 0.9
SATB1-201ENST00000338745 NUP155O75694 1391 aa20.64■□□□□ 0.9
SATB1-201ENST00000338745 CENPQQ7L2Z9 268 aaPredicted RBP20.64■□□□□ 0.9
SATB1-201ENST00000338745 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.63■□□□□ 0.89
SATB1-201ENST00000338745 KIF15Q9NS87 1388 aa20.62■□□□□ 0.89
SATB1-201ENST00000338745 CEP89Q96ST8 783 aa20.62■□□□□ 0.89
SATB1-201ENST00000338745 BCL2L13Q9BXK5 485 aa20.62■□□□□ 0.89
SATB1-201ENST00000338745 FAM184AQ8NB25 1140 aa20.62■□□□□ 0.89
SATB1-201ENST00000338745 NACADO15069 1562 aa20.61■□□□□ 0.89
SATB1-201ENST00000338745 BAZ1AQ9NRL2 1556 aaPredicted RBP20.6■□□□□ 0.89
SATB1-201ENST00000338745 EXOC6Q8TAG9 804 aa20.6■□□□□ 0.89
SATB1-201ENST00000338745 SKOR2Q2VWA4 1001 aaPredicted RBP20.6■□□□□ 0.89
SATB1-201ENST00000338745 MARCH6O60337 910 aa20.6■□□□□ 0.89
SATB1-201ENST00000338745 TSR1Q2NL82 804 aaKnown RBP20.6■□□□□ 0.89
SATB1-201ENST00000338745 TMX4Q9H1E5 349 aaPredicted RBP20.6■□□□□ 0.89
SATB1-201ENST00000338745 MCTP1Q6DN14 999 aa20.58■□□□□ 0.89
SATB1-201ENST00000338745 BCL11BQ9C0K0 894 aaPredicted RBP20.58■□□□□ 0.89
SATB1-201ENST00000338745 LTV1Q96GA3 475 aaPredicted RBP20.58■□□□□ 0.89
SATB1-201ENST00000338745 G3V3G9 751 aa20.57■□□□□ 0.88
SATB1-201ENST00000338745 RRP1P56182 461 aaKnown RBP20.57■□□□□ 0.88
SATB1-201ENST00000338745 DCAF8Q5TAQ9 597 aa20.57■□□□□ 0.88
SATB1-201ENST00000338745 BECN2A8MW95 431 aa20.56■□□□□ 0.88
SATB1-201ENST00000338745 FAM13BQ9NYF5 915 aa20.56■□□□□ 0.88
SATB1-201ENST00000338745 MYBBP1AQ9BQG0 1328 aaKnown RBP20.56■□□□□ 0.88
SATB1-201ENST00000338745 PDE3BQ13370 1112 aa20.55■□□□□ 0.88
SATB1-201ENST00000338745 TPM2P07951 284 aa20.55■□□□□ 0.88
SATB1-201ENST00000338745 NLRP13Q86W25 1043 aa20.55■□□□□ 0.88
SATB1-201ENST00000338745 FBXW7Q969H0 707 aa20.54■□□□□ 0.88
SATB1-201ENST00000338745 TERF2IPQ9NYB0 399 aa20.54■□□□□ 0.88
SATB1-201ENST00000338745 KIF3AQ9Y496 699 aa20.54■□□□□ 0.88
SATB1-201ENST00000338745 L3MBTL2Q969R5 705 aa20.53■□□□□ 0.88
SATB1-201ENST00000338745 FRAT2O75474 233 aaPredicted RBP20.53■□□□□ 0.88
SATB1-201ENST00000338745 FMN1Q68DA7 1419 aa20.53■□□□□ 0.88
SATB1-201ENST00000338745 ANKRD30AQ9BXX3 1397 aa20.53■□□□□ 0.88
SATB1-201ENST00000338745 PHLDB1Q86UU1 1377 aa20.53■□□□□ 0.88
SATB1-201ENST00000338745 GPS2Q13227 327 aa20.53■□□□□ 0.88
SATB1-201ENST00000338745 LMOD3Q0VAK6 560 aa20.53■□□□□ 0.88
SATB1-201ENST00000338745 CCDC70Q6NSX1 233 aa20.52■□□□□ 0.88
SATB1-201ENST00000338745 AMPHP49418 695 aa20.52■□□□□ 0.88
SATB1-201ENST00000338745 FBXO3Q9UK99 471 aa20.52■□□□□ 0.88
SATB1-201ENST00000338745 PCMTD1Q96MG8 357 aaPredicted RBP20.52■□□□□ 0.87
SATB1-201ENST00000338745 TRHP20396 242 aaPredicted RBP20.51■□□□□ 0.87
SATB1-201ENST00000338745 ELL2O00472 640 aaPredicted RBP20.51■□□□□ 0.87
SATB1-201ENST00000338745 TPM1P09493 284 aa20.51■□□□□ 0.87
SATB1-201ENST00000338745 PANK3Q9H999 370 aa20.5■□□□□ 0.87
SATB1-201ENST00000338745 WWC1Q8IX03 1113 aa20.5■□□□□ 0.87
SATB1-201ENST00000338745 ANO2Q9NQ90 1003 aa20.5■□□□□ 0.87
SATB1-201ENST00000338745 HNRNPMP52272 730 aaKnown RBP eCLIP20.49■□□□□ 0.87
SATB1-201ENST00000338745 HDAC5Q9UQL6 1122 aa20.49■□□□□ 0.87
SATB1-201ENST00000338745 ATP6V1DQ9Y5K8 247 aa20.48■□□□□ 0.87
SATB1-201ENST00000338745 NUTM2FA1L443 756 aa20.48■□□□□ 0.87
SATB1-201ENST00000338745 FOSBP53539 338 aa20.48■□□□□ 0.87
SATB1-201ENST00000338745 COG6Q9Y2V7 657 aa20.48■□□□□ 0.87
SATB1-201ENST00000338745 TEX35Q5T0J7 233 aa20.48■□□□□ 0.87
SATB1-201ENST00000338745 AKAP17AQ02040 695 aaKnown RBP20.48■□□□□ 0.87
SATB1-201ENST00000338745 WIZO95785 1651 aa20.47■□□□□ 0.87
SATB1-201ENST00000338745 CCDC88BA6NC98 1476 aa20.47■□□□□ 0.87
SATB1-201ENST00000338745 HOMER1Q86YM7 354 aa20.46■□□□□ 0.87
SATB1-201ENST00000338745 CHMP4AQ9BY43 222 aa20.46■□□□□ 0.87
SATB1-201ENST00000338745 NGDNQ8NEJ9 315 aaKnown RBP20.46■□□□□ 0.87
SATB1-201ENST00000338745 TRAK1Q9UPV9 953 aa20.45■□□□□ 0.86
SATB1-201ENST00000338745 ZKSCAN2Q63HK3 967 aa20.44■□□□□ 0.86
SATB1-201ENST00000338745 DIAPH3Q9NSV4 1193 aa20.44■□□□□ 0.86
SATB1-201ENST00000338745 NECTIN2Q92692 538 aa20.43■□□□□ 0.86
SATB1-201ENST00000338745 FANCIQ9NVI1 1328 aa20.43■□□□□ 0.86
SATB1-201ENST00000338745 NGEFQ8N5V2 710 aa20.43■□□□□ 0.86
SATB1-201ENST00000338745 E9PSI1 815 aa20.43■□□□□ 0.86
SATB1-201ENST00000338745 ZBED9Q6R2W3 1325 aa20.42■□□□□ 0.86
SATB1-201ENST00000338745 CECR2Q9BXF3 1484 aa20.42■□□□□ 0.86
SATB1-201ENST00000338745 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.41■□□□□ 0.86
SATB1-201ENST00000338745 TRIM29Q14134 588 aa20.41■□□□□ 0.86
SATB1-201ENST00000338745 BICD2Q8TD16 824 aa20.41■□□□□ 0.86
SATB1-201ENST00000338745 RAD21O60216 631 aa20.4■□□□□ 0.86
SATB1-201ENST00000338745 SYNE3Q6ZMZ3 975 aa20.4■□□□□ 0.86
SATB1-201ENST00000338745 PRDM2Q13029 1718 aa20.4■□□□□ 0.86
SATB1-201ENST00000338745 CARMIL2Q6F5E8 1435 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms