RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 SLKQ9H2G2 1235 aaPredicted RBP10.74□□□□□ -0.69
HPS4-201ENST00000336873 RALBP1Q15311 655 aa10.73□□□□□ -0.69
HPS4-201ENST00000336873 EPRSP07814 1512 aaKnown RBP10.73□□□□□ -0.69
HPS4-201ENST00000336873 NUTM2FA1L443 756 aa10.73□□□□□ -0.69
HPS4-201ENST00000336873 CCDC144AA2RUR9 1427 aa10.73□□□□□ -0.69
HPS4-201ENST00000336873 PDE4AP27815 886 aa10.73□□□□□ -0.69
HPS4-201ENST00000336873 ANKRD30BQ9BXX2 1392 aa10.72□□□□□ -0.69
HPS4-201ENST00000336873 EFCAB2Q5VUJ9 269 aa10.72□□□□□ -0.69
HPS4-201ENST00000336873 IPO9Q96P70 1041 aaKnown RBP10.72□□□□□ -0.69
HPS4-201ENST00000336873 C20orf194Q5TEA3 1177 aa10.72□□□□□ -0.69
HPS4-201ENST00000336873 MORC1Q86VD1 984 aa10.72□□□□□ -0.69
HPS4-201ENST00000336873 SRPK2P78362 688 aaKnown RBP10.71□□□□□ -0.69
HPS4-201ENST00000336873 GRIN2AQ12879 1464 aa10.71□□□□□ -0.7
HPS4-201ENST00000336873 KIF21AQ7Z4S6 1674 aa10.71□□□□□ -0.7
HPS4-201ENST00000336873 DAPK1P53355 1430 aa10.71□□□□□ -0.7
HPS4-201ENST00000336873 CFAP70Q5T0N1 1121 aa10.71□□□□□ -0.7
HPS4-201ENST00000336873 OSCARQ8IYS5 282 aa10.71□□□□□ -0.7
HPS4-201ENST00000336873 IQGAP2Q13576 1575 aa10.7□□□□□ -0.7
HPS4-201ENST00000336873 TCERG1O14776 1098 aaKnown RBP10.7□□□□□ -0.7
HPS4-201ENST00000336873 U2AF1L5P0DN76 240 aaPredicted RBP10.7□□□□□ -0.7
HPS4-201ENST00000336873 U2AF1Q01081 240 aaKnown RBP eCLIP10.7□□□□□ -0.76e-11■■■■□ 21.2
HPS4-201ENST00000336873 TPRNQ4KMQ1 711 aa10.7□□□□□ -0.7
HPS4-201ENST00000336873 ABCC5O15440 1437 aa10.7□□□□□ -0.7
HPS4-201ENST00000336873 COG6Q9Y2V7 657 aa10.7□□□□□ -0.7
HPS4-201ENST00000336873 SPAG9O60271 1321 aaKnown RBP10.7□□□□□ -0.7
HPS4-201ENST00000336873 SYNJ2O15056 1496 aa10.7□□□□□ -0.7
HPS4-201ENST00000336873 ELL2O00472 640 aaPredicted RBP10.7□□□□□ -0.7
HPS4-201ENST00000336873 GOLGA2Q08379 1002 aa10.69□□□□□ -0.7
HPS4-201ENST00000336873 THOC2Q8NI27 1593 aaKnown RBP10.68□□□□□ -0.7
HPS4-201ENST00000336873 HSP90AA1P07900 732 aaKnown RBP10.68□□□□□ -0.7
HPS4-201ENST00000336873 CTTNBP2Q8WZ74 1663 aa10.68□□□□□ -0.7
HPS4-201ENST00000336873 MAGI1Q96QZ7 1491 aaPredicted RBP10.68□□□□□ -0.7
HPS4-201ENST00000336873 FTSJ3Q8IY81 847 aaKnown RBP10.68□□□□□ -0.7
HPS4-201ENST00000336873 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.68□□□□□ -0.7
HPS4-201ENST00000336873 ZBTB7CA1YPR0 619 aa10.67□□□□□ -0.7
HPS4-201ENST00000336873 APBB1O00213 710 aa10.67□□□□□ -0.7
HPS4-201ENST00000336873 POGKQ9P215 609 aa10.67□□□□□ -0.7
HPS4-201ENST00000336873 BCAR3O75815 825 aa10.67□□□□□ -0.7
HPS4-201ENST00000336873 POLR1AO95602 1720 aaPredicted RBP10.67□□□□□ -0.7
HPS4-201ENST00000336873 ARHGEF11O15085 1522 aa10.66□□□□□ -0.7
HPS4-201ENST00000336873 FANCIQ9NVI1 1328 aa10.66□□□□□ -0.7
HPS4-201ENST00000336873 ESF1Q9H501 851 aaKnown RBP10.66□□□□□ -0.7
HPS4-201ENST00000336873 PANK1Q8TE04 598 aa10.66□□□□□ -0.7
HPS4-201ENST00000336873 GZF1Q9H116 711 aaPredicted RBP10.65□□□□□ -0.7
HPS4-201ENST00000336873 BCORL1Q5H9F3 1711 aa10.65□□□□□ -0.7
HPS4-201ENST00000336873 CDCA8Q53HL2 280 aa10.65□□□□□ -0.7
HPS4-201ENST00000336873 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.65□□□□□ -0.7
HPS4-201ENST00000336873 UPF2Q9HAU5 1272 aaKnown RBP10.65□□□□□ -0.7
HPS4-201ENST00000336873 ERICH6BQ5W0A0 696 aa10.64□□□□□ -0.71
HPS4-201ENST00000336873 SLC12A5Q9H2X9 1139 aa10.64□□□□□ -0.71
HPS4-201ENST00000336873 RSPH4AQ5TD94 716 aa10.64□□□□□ -0.71
HPS4-201ENST00000336873 EHBP1L1Q8N3D4 1523 aa10.63□□□□□ -0.71
HPS4-201ENST00000336873 KIAA1107Q9UPP5 1409 aa10.63□□□□□ -0.71
HPS4-201ENST00000336873 SUPT6HQ7KZ85 1726 aaKnown RBP10.63□□□□□ -0.71
HPS4-201ENST00000336873 GCC2Q8IWJ2 1684 aa10.63□□□□□ -0.71
HPS4-201ENST00000336873 NCOA1Q15788 1441 aa10.63□□□□□ -0.71
HPS4-201ENST00000336873 C9orf84Q5VXU9 1444 aa10.63□□□□□ -0.71
HPS4-201ENST00000336873 SAMD9Q5K651 1589 aa10.62□□□□□ -0.71
HPS4-201ENST00000336873 TROQ12816 1431 aaPredicted RBP10.62□□□□□ -0.71
HPS4-201ENST00000336873 CYB5RLQ6IPT4 315 aa10.62□□□□□ -0.71
HPS4-201ENST00000336873 C14orf37Q86TY3 774 aa10.62□□□□□ -0.71
HPS4-201ENST00000336873 HECW1Q76N89 1606 aa10.62□□□□□ -0.71
HPS4-201ENST00000336873 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.61□□□□□ -0.71
HPS4-201ENST00000336873 FOXD4L1Q9NU39 408 aa10.61□□□□□ -0.71
HPS4-201ENST00000336873 WASHC2CQ9Y4E1 1318 aa10.61□□□□□ -0.71
HPS4-201ENST00000336873 CFAP53Q96M91 514 aa10.61□□□□□ -0.71
HPS4-201ENST00000336873 PPP2R1AP30153 589 aa10.61□□□□□ -0.71
HPS4-201ENST00000336873 MINK1Q8N4C8 1332 aaPredicted RBP10.6□□□□□ -0.71
HPS4-201ENST00000336873 WDR62O43379 1518 aa10.6□□□□□ -0.71
HPS4-201ENST00000336873 GGNBP2Q9H3C7 697 aa10.6□□□□□ -0.71
HPS4-201ENST00000336873 CABP2Q9NPB3 220 aa10.6□□□□□ -0.71
HPS4-201ENST00000336873 MAPK8IP3Q9UPT6 1336 aa10.6□□□□□ -0.71
HPS4-201ENST00000336873 MIA2Q96PC5 1412 aa10.6□□□□□ -0.71
HPS4-201ENST00000336873 ABCA5Q8WWZ7 1642 aa10.59□□□□□ -0.71
HPS4-201ENST00000336873 ARID4BQ4LE39 1312 aaPredicted RBP10.59□□□□□ -0.71
HPS4-201ENST00000336873 ITPRIPQ8IWB1 547 aa10.59□□□□□ -0.71
HPS4-201ENST00000336873 FBLN1P23142 703 aa10.59□□□□□ -0.71
HPS4-201ENST00000336873 IL27Q8NEV9 243 aa10.59□□□□□ -0.71
HPS4-201ENST00000336873 ADAMTS12P58397 1594 aa10.58□□□□□ -0.72
HPS4-201ENST00000336873 RPRD2Q5VT52 1461 aaKnown RBP10.58□□□□□ -0.72
HPS4-201ENST00000336873 MFAP1P55081 439 aaKnown RBP10.58□□□□□ -0.72
HPS4-201ENST00000336873 SPATA31E1Q6ZUB1 1445 aa10.58□□□□□ -0.72
HPS4-201ENST00000336873 CAMSAP2Q08AD1 1489 aa10.57□□□□□ -0.72
HPS4-201ENST00000336873 DDRGK1Q96HY6 314 aa10.57□□□□□ -0.72
HPS4-201ENST00000336873 CENPJQ9HC77 1338 aaPredicted RBP10.57□□□□□ -0.72
HPS4-201ENST00000336873 MTHFSP49914 203 aa10.56□□□□□ -0.72
HPS4-201ENST00000336873 TSR2Q969E8 191 aaKnown RBP10.56□□□□□ -0.72
HPS4-201ENST00000336873 SMC4Q9NTJ3 1288 aa10.56□□□□□ -0.72
HPS4-201ENST00000336873 DISP3Q9P2K9 1392 aa10.56□□□□□ -0.72
HPS4-201ENST00000336873 TEX14Q8IWB6 1497 aa10.56□□□□□ -0.72
HPS4-201ENST00000336873 PDE3BQ13370 1112 aa10.56□□□□□ -0.72
HPS4-201ENST00000336873 EIF4G3O43432 1585 aaKnown RBP10.56□□□□□ -0.72
HPS4-201ENST00000336873 UGGT2Q9NYU1 1516 aa10.56□□□□□ -0.72
HPS4-201ENST00000336873 RAPGEF3O95398 923 aa10.55□□□□□ -0.72
HPS4-201ENST00000336873 TARBP1Q13395 1621 aaKnown RBP10.55□□□□□ -0.72
HPS4-201ENST00000336873 KANK1Q14678 1352 aa10.55□□□□□ -0.72
HPS4-201ENST00000336873 NUP153P49790 1475 aaKnown RBP10.55□□□□□ -0.72
HPS4-201ENST00000336873 HMOX1P09601 288 aa10.54□□□□□ -0.72
HPS4-201ENST00000336873 BRD4O60885 1362 aaPredicted RBP10.54□□□□□ -0.72
HPS4-201ENST00000336873 ARHGAP5Q13017 1502 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms