RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 SKOR2Q2VWA4 1001 aaPredicted RBP16.2■□□□□ 0.18
HLCS-201ENST00000336648 RASSF8Q8NHQ8 419 aa16.2■□□□□ 0.18
HLCS-201ENST00000336648 PAK3O75914 559 aaPredicted RBP16.18■□□□□ 0.18
HLCS-201ENST00000336648 MLECQ14165 292 aa16.18■□□□□ 0.18
HLCS-201ENST00000336648 RAB3GAP2Q9H2M9 1393 aa16.17■□□□□ 0.18
HLCS-201ENST00000336648 PATL2C9JE40 543 aaKnown RBP16.16■□□□□ 0.18
HLCS-201ENST00000336648 SF3A1Q15459 793 aaKnown RBP16.16■□□□□ 0.18
HLCS-201ENST00000336648 KIF15Q9NS87 1388 aa16.16■□□□□ 0.18
HLCS-201ENST00000336648 LRRFIP1Q32MZ4 808 aaKnown RBP16.15■□□□□ 0.18
HLCS-201ENST00000336648 PDE4CQ08493 712 aa16.15■□□□□ 0.18
HLCS-201ENST00000336648 TSR1Q2NL82 804 aaKnown RBP16.15■□□□□ 0.18
HLCS-201ENST00000336648 CENPQQ7L2Z9 268 aaPredicted RBP16.14■□□□□ 0.18
HLCS-201ENST00000336648 CHMP3Q9Y3E7 222 aa16.14■□□□□ 0.18
HLCS-201ENST00000336648 NGEFQ8N5V2 710 aa16.14■□□□□ 0.17
HLCS-201ENST00000336648 EID1Q9Y6B2 187 aa16.14■□□□□ 0.17
HLCS-201ENST00000336648 TPM1P09493 284 aa16.13■□□□□ 0.17
HLCS-201ENST00000336648 TPM2P07951 284 aa16.13■□□□□ 0.17
HLCS-201ENST00000336648 RRP12Q5JTH9 1297 aaKnown RBP16.13■□□□□ 0.17
HLCS-201ENST00000336648 ZNF330Q9Y3S2 320 aaPredicted RBP16.13■□□□□ 0.17
HLCS-201ENST00000336648 CCDC70Q6NSX1 233 aa16.12■□□□□ 0.17
HLCS-201ENST00000336648 TEX35Q5T0J7 233 aa16.12■□□□□ 0.17
HLCS-201ENST00000336648 UACAQ9BZF9 1416 aa16.11■□□□□ 0.17
HLCS-201ENST00000336648 MYBBP1AQ9BQG0 1328 aaKnown RBP16.11■□□□□ 0.17
HLCS-201ENST00000336648 MARCH6O60337 910 aa16.1■□□□□ 0.17
HLCS-201ENST00000336648 SOGA1O94964 1423 aa16.1■□□□□ 0.17
HLCS-201ENST00000336648 APPP05067 770 aa16.1■□□□□ 0.17
HLCS-201ENST00000336648 NOM1Q5C9Z4 860 aaKnown RBP16.1■□□□□ 0.17
HLCS-201ENST00000336648 SLC4A10Q6U841 1118 aa16.1■□□□□ 0.17
HLCS-201ENST00000336648 GOLGA6L19H0YKK7 550 aa16.09■□□□□ 0.17
HLCS-201ENST00000336648 G3V3G9 751 aa16.09■□□□□ 0.17
HLCS-201ENST00000336648 H3BQV1 296 aa16.09■□□□□ 0.17
HLCS-201ENST00000336648 DCAF8Q5TAQ9 597 aa16.09■□□□□ 0.17
HLCS-201ENST00000336648 IFFO2Q5TF58 517 aa16.09■□□□□ 0.17
HLCS-201ENST00000336648 FAM161AQ3B820 660 aa16.09■□□□□ 0.17
HLCS-201ENST00000336648 AMPHP49418 695 aa16.09■□□□□ 0.17
HLCS-201ENST00000336648 CPLX2Q6PUV4 134 aaKnown RBP16.09■□□□□ 0.17
HLCS-201ENST00000336648 TPD52L1Q16890 204 aaPredicted RBP16.08■□□□□ 0.17
HLCS-201ENST00000336648 PDS5BQ9NTI5 1447 aa16.08■□□□□ 0.16
HLCS-201ENST00000336648 CGNL1Q0VF96 1302 aa16.08■□□□□ 0.16
HLCS-201ENST00000336648 CCDC18Q5T9S5 1454 aa16.08■□□□□ 0.16
HLCS-201ENST00000336648 TRHP20396 242 aaPredicted RBP16.07■□□□□ 0.16
HLCS-201ENST00000336648 NGDNQ8NEJ9 315 aaKnown RBP16.07■□□□□ 0.16
HLCS-201ENST00000336648 E9PSI1 815 aa16.07■□□□□ 0.16
HLCS-201ENST00000336648 FAM184AQ8NB25 1140 aa16.07■□□□□ 0.16
HLCS-201ENST00000336648 RUFY2Q8WXA3 655 aa16.07■□□□□ 0.16
HLCS-201ENST00000336648 AKAP17AQ02040 695 aaKnown RBP16.07■□□□□ 0.16
HLCS-201ENST00000336648 BECN2A8MW95 431 aa16.06■□□□□ 0.16
HLCS-201ENST00000336648 TSHZ2Q9NRE2 1034 aa16.06■□□□□ 0.16
HLCS-201ENST00000336648 TOMM22Q9NS69 142 aa16.06■□□□□ 0.16
HLCS-201ENST00000336648 SYNE3Q6ZMZ3 975 aa16.06■□□□□ 0.16
HLCS-201ENST00000336648 ZKSCAN2Q63HK3 967 aa16.05■□□□□ 0.16
HLCS-201ENST00000336648 L3MBTL2Q969R5 705 aa16.05■□□□□ 0.16
HLCS-201ENST00000336648 CCDC47Q96A33 483 aaKnown RBP16.05■□□□□ 0.16
HLCS-201ENST00000336648 KIF3BO15066 747 aa16.04■□□□□ 0.16
HLCS-201ENST00000336648 FOXD1Q16676 465 aa16.04■□□□□ 0.16
HLCS-201ENST00000336648 REC8O95072 547 aa16.04■□□□□ 0.16
HLCS-201ENST00000336648 CLUAP1Q96AJ1 413 aa16.04■□□□□ 0.16
HLCS-201ENST00000336648 DDX49Q9Y6V7 483 aaKnown RBP16.04■□□□□ 0.16
HLCS-201ENST00000336648 FRAT2O75474 233 aaPredicted RBP16.04■□□□□ 0.16
HLCS-201ENST00000336648 KANK4Q5T7N3 995 aaPredicted RBP16.03■□□□□ 0.16
HLCS-201ENST00000336648 CCAR2Q8N163 923 aaKnown RBP16.03■□□□□ 0.16
HLCS-201ENST00000336648 ANKRD20A12PQ8NF67 263 aa16.03■□□□□ 0.16
HLCS-201ENST00000336648 CREBRFQ8IUR6 639 aa16.03■□□□□ 0.16
HLCS-201ENST00000336648 IPO7O95373 1038 aaKnown RBP16.02■□□□□ 0.16
HLCS-201ENST00000336648 HOOK1Q9UJC3 728 aaKnown RBP16.02■□□□□ 0.16
HLCS-201ENST00000336648 GTF2E1P29083 439 aaPredicted RBP16.02■□□□□ 0.15
HLCS-201ENST00000336648 ROCK1Q13464 1354 aa16.02■□□□□ 0.15
HLCS-201ENST00000336648 AMOTL1Q8IY63 956 aa16.01■□□□□ 0.15
HLCS-201ENST00000336648 AAMPQ13685 434 aa16.01■□□□□ 0.15
HLCS-201ENST00000336648 CCDC146Q8IYE0 955 aa16.01■□□□□ 0.15
HLCS-201ENST00000336648 ZKSCAN1P17029 563 aaPredicted RBP16■□□□□ 0.15
HLCS-201ENST00000336648 NOL8Q76FK4 1167 aaKnown RBP16■□□□□ 0.15
HLCS-201ENST00000336648 SMARCA2P51531 1590 aa16■□□□□ 0.15
HLCS-201ENST00000336648 WASHC2CQ9Y4E1 1318 aa16■□□□□ 0.15
HLCS-201ENST00000336648 DIAPH3Q9NSV4 1193 aa16■□□□□ 0.15
HLCS-201ENST00000336648 TRIM29Q14134 588 aa15.99■□□□□ 0.15
HLCS-201ENST00000336648 NEXNQ0ZGT2 675 aa15.99■□□□□ 0.15
HLCS-201ENST00000336648 PDE4AP27815 886 aa15.99■□□□□ 0.15
HLCS-201ENST00000336648 GSE1Q14687 1217 aa15.99■□□□□ 0.15
HLCS-201ENST00000336648 DDX19BQ9UMR2 479 aa15.99■□□□□ 0.15
HLCS-201ENST00000336648 CCDC144AA2RUR9 1427 aa15.98■□□□□ 0.15
HLCS-201ENST00000336648 PES1O00541 588 aaKnown RBP15.98■□□□□ 0.15
HLCS-201ENST00000336648 C1orf141Q5JVX7 400 aa15.98■□□□□ 0.15
HLCS-201ENST00000336648 CCDC9Q9Y3X0 531 aaKnown RBP15.98■□□□□ 0.15
HLCS-201ENST00000336648 FOXD4L1Q9NU39 408 aa15.98■□□□□ 0.15
HLCS-201ENST00000336648 VPS53Q5VIR6 699 aa15.98■□□□□ 0.15
HLCS-201ENST00000336648 API5Q9BZZ5 524 aaKnown RBP15.98■□□□□ 0.15
HLCS-201ENST00000336648 ZBED9Q6R2W3 1325 aa15.98■□□□□ 0.15
HLCS-201ENST00000336648 EVC2Q86UK5 1308 aa15.98■□□□□ 0.15
HLCS-201ENST00000336648 ANKRD45Q5TZF3 282 aa15.98■□□□□ 0.15
HLCS-201ENST00000336648 COG3Q96JB2 828 aa15.97■□□□□ 0.15
HLCS-201ENST00000336648 NOL10Q9BSC4 688 aaKnown RBP15.97■□□□□ 0.15
HLCS-201ENST00000336648 RILPL2Q969X0 211 aa15.97■□□□□ 0.15
HLCS-201ENST00000336648 RNF20Q5VTR2 975 aa15.97■□□□□ 0.15
HLCS-201ENST00000336648 CDR1P51861 262 aa15.96■□□□□ 0.15
HLCS-201ENST00000336648 VGFO15240 615 aaPredicted RBP15.96■□□□□ 0.15
HLCS-201ENST00000336648 RRP1P56182 461 aaKnown RBP15.96■□□□□ 0.15
HLCS-201ENST00000336648 RAPGEF2Q9Y4G8 1499 aa15.95■□□□□ 0.14
HLCS-201ENST00000336648 AK7Q96M32 723 aa15.94■□□□□ 0.14
HLCS-201ENST00000336648 ACBD3Q9H3P7 528 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms