RNA–Protein interactions for RNA: ENST00000334409.9

PDCD1-201, Transcript of programmed cell death 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD1, Length 2,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD1-201ENST00000334409 FOXD1Q16676 465 aa24.01■■□□□ 1.43
PDCD1-201ENST00000334409 DUOX2Q9NRD8 1548 aa24.01■■□□□ 1.43
PDCD1-201ENST00000334409 MPHOSPH9Q99550 1183 aa24.01■■□□□ 1.43
PDCD1-201ENST00000334409 HECW2Q9P2P5 1572 aa24■■□□□ 1.43
PDCD1-201ENST00000334409 MLH3Q9UHC1 1453 aa23.99■■□□□ 1.43
PDCD1-201ENST00000334409 NUP155O75694 1391 aa23.98■■□□□ 1.43
PDCD1-201ENST00000334409 SLC4A1APQ9BWU0 796 aaKnown RBP23.98■■□□□ 1.43
PDCD1-201ENST00000334409 YEATS2Q9ULM3 1422 aa23.98■■□□□ 1.43
PDCD1-201ENST00000334409 KIF3BO15066 747 aa23.95■■□□□ 1.42
PDCD1-201ENST00000334409 ABCA6Q8N139 1617 aa23.94■■□□□ 1.42
PDCD1-201ENST00000334409 ERBINQ96RT1 1412 aa23.94■■□□□ 1.42
PDCD1-201ENST00000334409 DHX29Q7Z478 1369 aaKnown RBP23.94■■□□□ 1.42
PDCD1-201ENST00000334409 SIN3AQ96ST3 1273 aa23.94■■□□□ 1.42
PDCD1-201ENST00000334409 PZPP20742 1482 aa23.92■■□□□ 1.42
PDCD1-201ENST00000334409 A2MP01023 1474 aa23.91■■□□□ 1.42
PDCD1-201ENST00000334409 DIP2CQ9Y2E4 1556 aa23.89■■□□□ 1.41
PDCD1-201ENST00000334409 PKD2Q13563 968 aa23.88■■□□□ 1.41
PDCD1-201ENST00000334409 ZMYM4Q5VZL5 1548 aa23.86■■□□□ 1.41
PDCD1-201ENST00000334409 GGT6Q6P531 493 aa23.86■■□□□ 1.41
PDCD1-201ENST00000334409 UNC13BO14795 1591 aa23.83■■□□□ 1.41
PDCD1-201ENST00000334409 FAM135AQ9P2D6 1515 aa23.83■■□□□ 1.41
PDCD1-201ENST00000334409 MAGI2Q86UL8 1455 aa23.8■■□□□ 1.4
PDCD1-201ENST00000334409 KDM5DQ9BY66 1539 aa23.8■■□□□ 1.4
PDCD1-201ENST00000334409 ATP10AO60312 1499 aa23.79■■□□□ 1.4
PDCD1-201ENST00000334409 EIF2AK4Q9P2K8 1649 aaKnown RBP23.77■■□□□ 1.4
PDCD1-201ENST00000334409 ANKRD30BQ9BXX2 1392 aa23.75■■□□□ 1.39
PDCD1-201ENST00000334409 DEPDC5O75140 1603 aa23.75■■□□□ 1.39
PDCD1-201ENST00000334409 IQGAP3Q86VI3 1631 aa23.75■■□□□ 1.39
PDCD1-201ENST00000334409 MROH1Q8NDA8 1641 aa23.75■■□□□ 1.39
PDCD1-201ENST00000334409 MLECQ14165 292 aa23.75■■□□□ 1.39
PDCD1-201ENST00000334409 KANK1Q14678 1352 aa23.74■■□□□ 1.39
PDCD1-201ENST00000334409 SIGLEC1Q9BZZ2 1709 aa23.73■■□□□ 1.39
PDCD1-201ENST00000334409 PRKCSHP14314 528 aaPredicted RBP23.73■■□□□ 1.39
PDCD1-201ENST00000334409 ARHGEF40Q8TER5 1519 aa23.71■■□□□ 1.39
PDCD1-201ENST00000334409 ERICH6Q7L0X2 663 aa23.71■■□□□ 1.39
PDCD1-201ENST00000334409 TIMELESSQ9UNS1 1208 aa23.71■■□□□ 1.39
PDCD1-201ENST00000334409 PRDM15P57071 1507 aaPredicted RBP23.7■■□□□ 1.38
PDCD1-201ENST00000334409 ARID4BQ4LE39 1312 aaPredicted RBP23.69■■□□□ 1.38
PDCD1-201ENST00000334409 WASHC2CQ9Y4E1 1318 aa23.69■■□□□ 1.38
PDCD1-201ENST00000334409 RNF17Q9BXT8 1623 aaKnown RBP23.69■■□□□ 1.38
PDCD1-201ENST00000334409 RBM19Q9Y4C8 960 aaKnown RBP23.67■■□□□ 1.38
PDCD1-201ENST00000334409 VWDEQ8N2E2 1590 aa23.67■■□□□ 1.38
PDCD1-201ENST00000334409 CEP152O94986 1710 aa23.66■■□□□ 1.38
PDCD1-201ENST00000334409 BCORL1Q5H9F3 1711 aa23.65■■□□□ 1.38
PDCD1-201ENST00000334409 E9PCH4 1651 aa23.64■■□□□ 1.37
PDCD1-201ENST00000334409 TONSLQ96HA7 1378 aa23.62■■□□□ 1.37
PDCD1-201ENST00000334409 CFAP65Q6ZU64 1925 aaKnown RBP23.62■■□□□ 1.37
PDCD1-201ENST00000334409 REREQ9P2R6 1566 aa23.62■■□□□ 1.37
PDCD1-201ENST00000334409 PLA2R1Q13018 1463 aa23.61■■□□□ 1.37
PDCD1-201ENST00000334409 TET3O43151 1660 aa23.61■■□□□ 1.37
PDCD1-201ENST00000334409 ABCC3O15438 1527 aa23.6■■□□□ 1.37
PDCD1-201ENST00000334409 AGLP35573 1532 aa23.59■■□□□ 1.37
PDCD1-201ENST00000334409 RPRD2Q5VT52 1461 aaKnown RBP23.57■■□□□ 1.36
PDCD1-201ENST00000334409 L3MBTL2Q969R5 705 aa23.56■■□□□ 1.36
PDCD1-201ENST00000334409 EFCAB6Q5THR3 1501 aa23.55■■□□□ 1.36
PDCD1-201ENST00000334409 LMTK2Q8IWU2 1503 aa23.55■■□□□ 1.36
PDCD1-201ENST00000334409 NEFLP07196 543 aa23.54■■□□□ 1.36
PDCD1-201ENST00000334409 CCDC144AA2RUR9 1427 aa23.54■■□□□ 1.36
PDCD1-201ENST00000334409 NPATQ14207 1427 aa23.54■■□□□ 1.36
PDCD1-201ENST00000334409 FANCIQ9NVI1 1328 aa23.53■■□□□ 1.36
PDCD1-201ENST00000334409 FKBP8Q14318 412 aa23.52■■□□□ 1.36
PDCD1-201ENST00000334409 RGL3Q3MIN7 710 aa23.52■■□□□ 1.36
PDCD1-201ENST00000334409 CAMSAP1Q5T5Y3 1602 aa23.52■■□□□ 1.36
PDCD1-201ENST00000334409 PPP1R15AO75807 674 aaPredicted RBP23.51■■□□□ 1.35
PDCD1-201ENST00000334409 FBXO31Q5XUX0 539 aaPredicted RBP23.5■■□□□ 1.35
PDCD1-201ENST00000334409 ESF1Q9H501 851 aaKnown RBP23.5■■□□□ 1.35
PDCD1-201ENST00000334409 SPHKAPQ2M3C7 1700 aa23.49■■□□□ 1.35
PDCD1-201ENST00000334409 UGGT1Q9NYU2 1555 aa23.49■■□□□ 1.35
PDCD1-201ENST00000334409 CLTCQ00610 1675 aaKnown RBP23.49■■□□□ 1.35
PDCD1-201ENST00000334409 PTPRTO14522 1441 aa23.48■■□□□ 1.35
PDCD1-201ENST00000334409 PLPPR3Q6T4P5 718 aa23.47■■□□□ 1.35
PDCD1-201ENST00000334409 KDM2AQ9Y2K7 1162 aa23.46■■□□□ 1.35
PDCD1-201ENST00000334409 ZC3H13Q5T200 1668 aaKnown RBP23.46■■□□□ 1.35
PDCD1-201ENST00000334409 PPP6R1Q9UPN7 881 aa23.45■■□□□ 1.34
PDCD1-201ENST00000334409 TRPM2O94759 1503 aa23.45■■□□□ 1.34
PDCD1-201ENST00000334409 CLTCL1P53675 1640 aa23.44■■□□□ 1.34
PDCD1-201ENST00000334409 ZNF326Q5BKZ1 582 aaKnown RBP23.44■■□□□ 1.34
PDCD1-201ENST00000334409 BCANQ96GW7 911 aa23.44■■□□□ 1.34
PDCD1-201ENST00000334409 CHGAP10645 457 aaKnown RBP23.42■■□□□ 1.34
PDCD1-201ENST00000334409 DCAF11Q8TEB1 546 aa23.42■■□□□ 1.34
PDCD1-201ENST00000334409 ARHGAP31Q2M1Z3 1444 aa23.4■■□□□ 1.34
PDCD1-201ENST00000334409 ZMYM3Q14202 1370 aa23.4■■□□□ 1.34
PDCD1-201ENST00000334409 CEBPAP49715 358 aaPredicted RBP23.39■■□□□ 1.34
PDCD1-201ENST00000334409 DDX10Q13206 875 aaKnown RBP23.39■■□□□ 1.34
PDCD1-201ENST00000334409 NBPF8Q3BBV2 869 aa23.39■■□□□ 1.33
PDCD1-201ENST00000334409 MSH5O43196 834 aa23.38■■□□□ 1.33
PDCD1-201ENST00000334409 NOS1P29475 1434 aa23.37■■□□□ 1.33
PDCD1-201ENST00000334409 SYNMO15061 1565 aa23.36■■□□□ 1.33
PDCD1-201ENST00000334409 CNTLNQ9NXG0 1405 aa23.35■■□□□ 1.33
PDCD1-201ENST00000334409 IDI1Q13907 227 aa23.35■■□□□ 1.33
PDCD1-201ENST00000334409 PREX1Q8TCU6 1659 aa23.35■■□□□ 1.33
PDCD1-201ENST00000334409 SPATA31E1Q6ZUB1 1445 aa23.34■■□□□ 1.33
PDCD1-201ENST00000334409 CCER2I3L3R5 266 aa23.33■■□□□ 1.32
PDCD1-201ENST00000334409 ERVK-7P63135 1459 aa23.32■■□□□ 1.32
PDCD1-201ENST00000334409 FER1L4A9Z1Z3 1794 aa23.3■■□□□ 1.32
PDCD1-201ENST00000334409 KIF1BO60333 1816 aa23.29■■□□□ 1.32
PDCD1-201ENST00000334409 HIRIP3Q9BW71 556 aaPredicted RBP23.29■■□□□ 1.32
PDCD1-201ENST00000334409 MROH2AA6NES4 1674 aa23.28■■□□□ 1.32
PDCD1-201ENST00000334409 NUTM2DQ5VT03 806 aaPredicted RBP23.27■■□□□ 1.32
PDCD1-201ENST00000334409 SLC52A1Q9NWF4 448 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms