RNA–Protein interactions for RNA: ENST00000328111.6

DNMT3B-202, Transcript of DNA methyltransferase 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT3B, Length 4,336 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-202ENST00000328111 MAP3K1Q13233 1512 aa17.67■□□□□ 0.42
DNMT3B-202ENST00000328111 AFAP1Q8N556 730 aa17.67■□□□□ 0.42
DNMT3B-202ENST00000328111 MRC2Q9UBG0 1479 aa17.67■□□□□ 0.42
DNMT3B-202ENST00000328111 EPRSP07814 1512 aaKnown RBP17.67■□□□□ 0.42
DNMT3B-202ENST00000328111 HDGFL2Q7Z4V5 671 aaPredicted RBP17.67■□□□□ 0.42
DNMT3B-202ENST00000328111 TROQ12816 1431 aaPredicted RBP17.67■□□□□ 0.42
DNMT3B-202ENST00000328111 APAF1O14727 1248 aa17.66■□□□□ 0.42
DNMT3B-202ENST00000328111 C11orf95C9JLR9 678 aaPredicted RBP17.65■□□□□ 0.42
DNMT3B-202ENST00000328111 DAPK1P53355 1430 aa17.64■□□□□ 0.41
DNMT3B-202ENST00000328111 CRBNQ96SW2 442 aa17.64■□□□□ 0.41
DNMT3B-202ENST00000328111 KIAA1107Q9UPP5 1409 aa17.64■□□□□ 0.41
DNMT3B-202ENST00000328111 RTN4Q9NQC3 1192 aaKnown RBP17.63■□□□□ 0.41
DNMT3B-202ENST00000328111 SNAPC4Q5SXM2 1469 aa17.63■□□□□ 0.41
DNMT3B-202ENST00000328111 IFT140Q96RY7 1462 aa17.63■□□□□ 0.41
DNMT3B-202ENST00000328111 CENPJQ9HC77 1338 aaPredicted RBP17.62■□□□□ 0.41
DNMT3B-202ENST00000328111 SUPT6HQ7KZ85 1726 aaKnown RBP17.62■□□□□ 0.41
DNMT3B-202ENST00000328111 BCL2L13Q9BXK5 485 aa17.61■□□□□ 0.41
DNMT3B-202ENST00000328111 PDE4AP27815 886 aa17.61■□□□□ 0.41
DNMT3B-202ENST00000328111 SPRYD3Q8NCJ5 442 aa17.61■□□□□ 0.41
DNMT3B-202ENST00000328111 C9orf84Q5VXU9 1444 aa17.61■□□□□ 0.41
DNMT3B-202ENST00000328111 HECW1Q76N89 1606 aa17.6■□□□□ 0.41
DNMT3B-202ENST00000328111 ITPRIPQ8IWB1 547 aa17.59■□□□□ 0.41
DNMT3B-202ENST00000328111 CDCA7LQ96GN5 454 aa17.59■□□□□ 0.41
DNMT3B-202ENST00000328111 TERF2IPQ9NYB0 399 aa17.59■□□□□ 0.41
DNMT3B-202ENST00000328111 SMC4Q9NTJ3 1288 aa17.59■□□□□ 0.41
DNMT3B-202ENST00000328111 LMOD2Q6P5Q4 547 aa17.58■□□□□ 0.41
DNMT3B-202ENST00000328111 CHMP4BQ9H444 224 aaKnown RBP17.58■□□□□ 0.41
DNMT3B-202ENST00000328111 URB2Q14146 1524 aaKnown RBP17.58■□□□□ 0.4
DNMT3B-202ENST00000328111 KIAA0586Q9BVV6 1533 aa17.58■□□□□ 0.4
DNMT3B-202ENST00000328111 RWDD1Q9H446 243 aaPredicted RBP17.58■□□□□ 0.4
DNMT3B-202ENST00000328111 FANCIQ9NVI1 1328 aa17.58■□□□□ 0.4
DNMT3B-202ENST00000328111 PNISRQ8TF01 805 aaKnown RBP17.57■□□□□ 0.4
DNMT3B-202ENST00000328111 SYNJ2O15056 1496 aa17.57■□□□□ 0.4
DNMT3B-202ENST00000328111 IPO8O15397 1037 aaKnown RBP17.57■□□□□ 0.4
DNMT3B-202ENST00000328111 HDGFP51858 240 aaKnown RBP17.57■□□□□ 0.4
DNMT3B-202ENST00000328111 ADAMTS8Q9UP79 889 aa17.57■□□□□ 0.4
DNMT3B-202ENST00000328111 ANKRD30BQ9BXX2 1392 aa17.56■□□□□ 0.4
DNMT3B-202ENST00000328111 SLKQ9H2G2 1235 aaPredicted RBP17.56■□□□□ 0.4
DNMT3B-202ENST00000328111 BRD4O60885 1362 aaPredicted RBP17.56■□□□□ 0.4
DNMT3B-202ENST00000328111 GOLGA6L22H0YM25 854 aa17.56■□□□□ 0.4
DNMT3B-202ENST00000328111 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.55■□□□□ 0.4
DNMT3B-202ENST00000328111 NCLP19338 710 aaKnown RBP17.55■□□□□ 0.4
DNMT3B-202ENST00000328111 IQGAP2Q13576 1575 aa17.55■□□□□ 0.4
DNMT3B-202ENST00000328111 VGFO15240 615 aaPredicted RBP17.54■□□□□ 0.4
DNMT3B-202ENST00000328111 CFAP70Q5T0N1 1121 aa17.54■□□□□ 0.4
DNMT3B-202ENST00000328111 ROCK1Q13464 1354 aa17.54■□□□□ 0.4
DNMT3B-202ENST00000328111 PTPRKQ15262 1439 aa17.54■□□□□ 0.4
DNMT3B-202ENST00000328111 E9PSI1 815 aa17.54■□□□□ 0.4
DNMT3B-202ENST00000328111 LAMC3Q9Y6N6 1575 aa17.54■□□□□ 0.4
DNMT3B-202ENST00000328111 COG6Q9Y2V7 657 aa17.53■□□□□ 0.4
DNMT3B-202ENST00000328111 CUL7Q14999 1698 aa17.53■□□□□ 0.4
DNMT3B-202ENST00000328111 ABCC5O15440 1437 aa17.53■□□□□ 0.4
DNMT3B-202ENST00000328111 ARHGAP5Q13017 1502 aa17.53■□□□□ 0.4
DNMT3B-202ENST00000328111 HSP90AB1P08238 724 aaKnown RBP17.53■□□□□ 0.4
DNMT3B-202ENST00000328111 CASC1Q6TDU7 716 aa17.53■□□□□ 0.4
DNMT3B-202ENST00000328111 APBB1O00213 710 aa17.52■□□□□ 0.4
DNMT3B-202ENST00000328111 CENPQQ7L2Z9 268 aaPredicted RBP17.52■□□□□ 0.4
DNMT3B-202ENST00000328111 PMFBP1Q8TBY8 1022 aa17.52■□□□□ 0.4
DNMT3B-202ENST00000328111 AKNAQ7Z591 1439 aa17.52■□□□□ 0.4
DNMT3B-202ENST00000328111 PTPN23Q9H3S7 1636 aa17.52■□□□□ 0.4
DNMT3B-202ENST00000328111 CGNL1Q0VF96 1302 aa17.52■□□□□ 0.39
DNMT3B-202ENST00000328111 PLB1Q6P1J6 1458 aa17.52■□□□□ 0.39
DNMT3B-202ENST00000328111 MAPKBP1O60336 1514 aa17.51■□□□□ 0.39
DNMT3B-202ENST00000328111 SLC4A3P48751 1232 aa17.51■□□□□ 0.39
DNMT3B-202ENST00000328111 TMEM132EQ6IEE7 984 aa17.51■□□□□ 0.39
DNMT3B-202ENST00000328111 MINK1Q8N4C8 1332 aaPredicted RBP17.51■□□□□ 0.39
DNMT3B-202ENST00000328111 NUTM2FA1L443 756 aa17.51■□□□□ 0.39
DNMT3B-202ENST00000328111 HSCBQ8IWL3 235 aa17.5■□□□□ 0.39
DNMT3B-202ENST00000328111 EVC2Q86UK5 1308 aa17.5■□□□□ 0.39
DNMT3B-202ENST00000328111 STAC3Q96MF2 364 aa17.49■□□□□ 0.39
DNMT3B-202ENST00000328111 TRIM44Q96DX7 344 aaPredicted RBP17.48■□□□□ 0.39
DNMT3B-202ENST00000328111 CYB5RLQ6IPT4 315 aa17.48■□□□□ 0.39
DNMT3B-202ENST00000328111 ELL2O00472 640 aaPredicted RBP17.47■□□□□ 0.39
DNMT3B-202ENST00000328111 RTF1Q92541 710 aaKnown RBP17.46■□□□□ 0.39
DNMT3B-202ENST00000328111 MFAP1P55081 439 aaKnown RBP17.46■□□□□ 0.39
DNMT3B-202ENST00000328111 CALD1Q05682 793 aaKnown RBP17.46■□□□□ 0.39
DNMT3B-202ENST00000328111 OSCARQ8IYS5 282 aa17.46■□□□□ 0.39
DNMT3B-202ENST00000328111 PPP2R1AP30153 589 aa17.46■□□□□ 0.39
DNMT3B-202ENST00000328111 FAM161AQ3B820 660 aa17.46■□□□□ 0.39
DNMT3B-202ENST00000328111 TPRNQ4KMQ1 711 aa17.46■□□□□ 0.39
DNMT3B-202ENST00000328111 ZNF608Q9ULD9 1512 aaPredicted RBP17.46■□□□□ 0.38
DNMT3B-202ENST00000328111 ARHGEF11O15085 1522 aa17.45■□□□□ 0.38
DNMT3B-202ENST00000328111 NCOA1Q15788 1441 aa17.45■□□□□ 0.38
DNMT3B-202ENST00000328111 HAP1P54257 671 aaPredicted RBP17.44■□□□□ 0.38
DNMT3B-202ENST00000328111 A0A0G2JS52 829 aa17.43■□□□□ 0.38
DNMT3B-202ENST00000328111 CAMSAP2Q08AD1 1489 aa17.42■□□□□ 0.38
DNMT3B-202ENST00000328111 PAK3O75914 559 aaPredicted RBP17.41■□□□□ 0.38
DNMT3B-202ENST00000328111 GRIN2AQ12879 1464 aa17.4■□□□□ 0.38
DNMT3B-202ENST00000328111 ZKSCAN2Q63HK3 967 aa17.4■□□□□ 0.38
DNMT3B-202ENST00000328111 OS9Q13438 667 aaPredicted RBP17.4■□□□□ 0.38
DNMT3B-202ENST00000328111 MTHFSP49914 203 aa17.4■□□□□ 0.38
DNMT3B-202ENST00000328111 RPRD2Q5VT52 1461 aaKnown RBP17.39■□□□□ 0.38
DNMT3B-202ENST00000328111 GGNBP2Q9H3C7 697 aa17.39■□□□□ 0.37
DNMT3B-202ENST00000328111 MAGI1Q96QZ7 1491 aaPredicted RBP17.39■□□□□ 0.37
DNMT3B-202ENST00000328111 RUNDC1Q96C34 613 aa17.39■□□□□ 0.37
DNMT3B-202ENST00000328111 GZF1Q9H116 711 aaPredicted RBP17.39■□□□□ 0.37
DNMT3B-202ENST00000328111 CABP2Q9NPB3 220 aa17.39■□□□□ 0.37
DNMT3B-202ENST00000328111 SCAPERQ9BY12 1400 aa17.39■□□□□ 0.37
DNMT3B-202ENST00000328111 TRHP20396 242 aaPredicted RBP17.39■□□□□ 0.37
DNMT3B-202ENST00000328111 NGEFQ8N5V2 710 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms