RNA–Protein interactions for RNA: ENST00000327628.9

TRAK1-201, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAK1, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-201ENST00000327628 GOLGA6L1Q8N7Z2 621 aa16.52■□□□□ 0.24
TRAK1-201ENST00000327628 NOC3LQ8WTT2 800 aaKnown RBP16.52■□□□□ 0.23
TRAK1-201ENST00000327628 TDRD9Q8NDG6 1382 aaKnown RBP16.52■□□□□ 0.23
TRAK1-201ENST00000327628 SAFB2Q14151 953 aaKnown RBP eCLIP16.52■□□□□ 0.23
TRAK1-201ENST00000327628 HSP90B1P14625 803 aaKnown RBP16.51■□□□□ 0.23
TRAK1-201ENST00000327628 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.51■□□□□ 0.23
TRAK1-201ENST00000327628 SKOR2Q2VWA4 1001 aaPredicted RBP16.51■□□□□ 0.23
TRAK1-201ENST00000327628 CUX1P39880 1505 aa16.51■□□□□ 0.23
TRAK1-201ENST00000327628 G3V3G9 751 aa16.5■□□□□ 0.23
TRAK1-201ENST00000327628 SOX12O15370 315 aa16.5■□□□□ 0.23
TRAK1-201ENST00000327628 DCAF8Q5TAQ9 597 aa16.5■□□□□ 0.23
TRAK1-201ENST00000327628 E9PSI1 815 aa16.5■□□□□ 0.23
TRAK1-201ENST00000327628 GOLGA6L3A6NEY3 463 aa16.49■□□□□ 0.23
TRAK1-201ENST00000327628 TPM3P06753 285 aa16.49■□□□□ 0.23
TRAK1-201ENST00000327628 CENPQQ7L2Z9 268 aaPredicted RBP16.49■□□□□ 0.23
TRAK1-201ENST00000327628 CEP89Q96ST8 783 aa16.48■□□□□ 0.23
TRAK1-201ENST00000327628 TPM2P07951 284 aa16.48■□□□□ 0.23
TRAK1-201ENST00000327628 RUFY2Q8WXA3 655 aa16.48■□□□□ 0.23
TRAK1-201ENST00000327628 AMOTL1Q8IY63 956 aa16.47■□□□□ 0.23
TRAK1-201ENST00000327628 TRIM6-TRIM34B2RNG4 842 aa16.47■□□□□ 0.23
TRAK1-201ENST00000327628 COG3Q96JB2 828 aa16.47■□□□□ 0.23
TRAK1-201ENST00000327628 CPLX2Q6PUV4 134 aaKnown RBP16.47■□□□□ 0.23
TRAK1-201ENST00000327628 C1orf141Q5JVX7 400 aa16.46■□□□□ 0.23
TRAK1-201ENST00000327628 KANK4Q5T7N3 995 aaPredicted RBP16.46■□□□□ 0.22
TRAK1-201ENST00000327628 JPH4Q96JJ6 628 aa16.45■□□□□ 0.22
TRAK1-201ENST00000327628 TAOK2Q9UL54 1235 aa16.45■□□□□ 0.22
TRAK1-201ENST00000327628 FHOD3Q2V2M9 1422 aa16.45■□□□□ 0.22
TRAK1-201ENST00000327628 RASSF8Q8NHQ8 419 aa16.45■□□□□ 0.22
TRAK1-201ENST00000327628 PTPRGP23470 1445 aa16.45■□□□□ 0.22
TRAK1-201ENST00000327628 CHMP3Q9Y3E7 222 aa16.44■□□□□ 0.22
TRAK1-201ENST00000327628 MYOM3Q5VTT5 1437 aa16.44■□□□□ 0.22
TRAK1-201ENST00000327628 ATAD2BQ9ULI0 1458 aa16.44■□□□□ 0.22
TRAK1-201ENST00000327628 L3MBTL2Q969R5 705 aa16.44■□□□□ 0.22
TRAK1-201ENST00000327628 IPO9Q96P70 1041 aaKnown RBP16.43■□□□□ 0.22
TRAK1-201ENST00000327628 TPM1P09493 284 aa16.43■□□□□ 0.22
TRAK1-201ENST00000327628 NEXNQ0ZGT2 675 aa16.43■□□□□ 0.22
TRAK1-201ENST00000327628 SYNE3Q6ZMZ3 975 aa16.43■□□□□ 0.22
TRAK1-201ENST00000327628 CCDC47Q96A33 483 aaKnown RBP16.43■□□□□ 0.22
TRAK1-201ENST00000327628 NOL10Q9BSC4 688 aaKnown RBP16.43■□□□□ 0.22
TRAK1-201ENST00000327628 RBM19Q9Y4C8 960 aaKnown RBP16.43■□□□□ 0.22
TRAK1-201ENST00000327628 ZKSCAN2Q63HK3 967 aa16.42■□□□□ 0.22
TRAK1-201ENST00000327628 TSR1Q2NL82 804 aaKnown RBP16.42■□□□□ 0.22
TRAK1-201ENST00000327628 API5Q9BZZ5 524 aaKnown RBP16.42■□□□□ 0.22
TRAK1-201ENST00000327628 MIA2Q96PC5 1412 aa16.41■□□□□ 0.22
TRAK1-201ENST00000327628 HNRNPMP52272 730 aaKnown RBP eCLIP16.41■□□□□ 0.22
TRAK1-201ENST00000327628 AKAP17AQ02040 695 aaKnown RBP16.41■□□□□ 0.22
TRAK1-201ENST00000327628 HSP90AB4PQ58FF6 505 aa16.41■□□□□ 0.22
TRAK1-201ENST00000327628 WASHC2AQ641Q2 1341 aa16.41■□□□□ 0.22
TRAK1-201ENST00000327628 SMARCA4P51532 1647 aa16.41■□□□□ 0.22
TRAK1-201ENST00000327628 DDX58O95786 925 aaKnown RBP16.41■□□□□ 0.22
TRAK1-201ENST00000327628 MFAP1P55081 439 aaKnown RBP16.41■□□□□ 0.22
TRAK1-201ENST00000327628 SF3A1Q15459 793 aaKnown RBP16.4■□□□□ 0.22
TRAK1-201ENST00000327628 CCDC9Q9Y3X0 531 aaKnown RBP16.4■□□□□ 0.22
TRAK1-201ENST00000327628 FANCD2Q9BXW9 1451 aa16.4■□□□□ 0.22
TRAK1-201ENST00000327628 GTF2E1P29083 439 aaPredicted RBP16.4■□□□□ 0.22
TRAK1-201ENST00000327628 CCDC70Q6NSX1 233 aa16.4■□□□□ 0.22
TRAK1-201ENST00000327628 APBB1O00213 710 aa16.4■□□□□ 0.22
TRAK1-201ENST00000327628 REC8O95072 547 aa16.4■□□□□ 0.22
TRAK1-201ENST00000327628 MARCH6O60337 910 aa16.39■□□□□ 0.21
TRAK1-201ENST00000327628 DEKP35659 375 aaKnown RBP16.39■□□□□ 0.21
TRAK1-201ENST00000327628 HOOK1Q9UJC3 728 aaKnown RBP16.39■□□□□ 0.21
TRAK1-201ENST00000327628 ZNF330Q9Y3S2 320 aaPredicted RBP16.39■□□□□ 0.21
TRAK1-201ENST00000327628 SCAPERQ9BY12 1400 aa16.38■□□□□ 0.21
TRAK1-201ENST00000327628 DDX19BQ9UMR2 479 aa16.38■□□□□ 0.21
TRAK1-201ENST00000327628 FRAT2O75474 233 aaPredicted RBP16.37■□□□□ 0.21
TRAK1-201ENST00000327628 TTC5Q8N0Z6 440 aa16.37■□□□□ 0.21
TRAK1-201ENST00000327628 ZBED9Q6R2W3 1325 aa16.36■□□□□ 0.21
TRAK1-201ENST00000327628 FAM161AQ3B820 660 aa16.36■□□□□ 0.21
TRAK1-201ENST00000327628 H3BQV1 296 aa16.36■□□□□ 0.21
TRAK1-201ENST00000327628 TEFQ10587 303 aa16.36■□□□□ 0.21
TRAK1-201ENST00000327628 IFFO2Q5TF58 517 aa16.36■□□□□ 0.21
TRAK1-201ENST00000327628 SLC4A10Q6U841 1118 aa16.36■□□□□ 0.21
TRAK1-201ENST00000327628 RNF20Q5VTR2 975 aa16.36■□□□□ 0.21
TRAK1-201ENST00000327628 FAM184AQ8NB25 1140 aa16.36■□□□□ 0.21
TRAK1-201ENST00000327628 A0A0U1RQG5 324 aaPredicted RBP16.36■□□□□ 0.21
TRAK1-201ENST00000327628 ANKRD20A12PQ8NF67 263 aa16.36■□□□□ 0.21
TRAK1-201ENST00000327628 GPS2Q13227 327 aa16.35■□□□□ 0.21
TRAK1-201ENST00000327628 ZKSCAN1P17029 563 aaPredicted RBP16.35■□□□□ 0.21
TRAK1-201ENST00000327628 AEBP2Q6ZN18 517 aaPredicted RBP16.34■□□□□ 0.21
TRAK1-201ENST00000327628 TRIM29Q14134 588 aa16.34■□□□□ 0.21
TRAK1-201ENST00000327628 HMGB2P26583 209 aaKnown RBP16.33■□□□□ 0.21
TRAK1-201ENST00000327628 TPD52L1Q16890 204 aaPredicted RBP16.33■□□□□ 0.21
TRAK1-201ENST00000327628 DIAPH3Q9NSV4 1193 aa16.33■□□□□ 0.2
TRAK1-201ENST00000327628 FOXD1Q16676 465 aa16.33■□□□□ 0.2
TRAK1-201ENST00000327628 WIZO95785 1651 aa16.32■□□□□ 0.2
TRAK1-201ENST00000327628 SENP3-EIF4A1A0A087X0R7 540 aa16.32■□□□□ 0.2
TRAK1-201ENST00000327628 GOLGA6L19H0YKK7 550 aa16.32■□□□□ 0.2
TRAK1-201ENST00000327628 DHX57Q6P158 1386 aaKnown RBP16.32■□□□□ 0.2
TRAK1-201ENST00000327628 USP47Q96K76 1375 aa16.32■□□□□ 0.2
TRAK1-201ENST00000327628 SPRYD3Q8NCJ5 442 aa16.32■□□□□ 0.2
TRAK1-201ENST00000327628 TOMM22Q9NS69 142 aa16.31■□□□□ 0.2
TRAK1-201ENST00000327628 DIAPH1O60610 1272 aaKnown RBP16.31■□□□□ 0.2
TRAK1-201ENST00000327628 TRIM34Q9BYJ4 488 aa16.31■□□□□ 0.2
TRAK1-201ENST00000327628 PANK3Q9H999 370 aa16.3■□□□□ 0.2
TRAK1-201ENST00000327628 SLKQ9H2G2 1235 aaPredicted RBP16.3■□□□□ 0.2
TRAK1-201ENST00000327628 GNAI1P63096 354 aa16.29■□□□□ 0.2
TRAK1-201ENST00000327628 TRAK1Q9UPV9 953 aa16.29■□□□□ 0.2
TRAK1-201ENST00000327628 IPO7O95373 1038 aaKnown RBP16.29■□□□□ 0.2
TRAK1-201ENST00000327628 EVA1CP58658 441 aa16.29■□□□□ 0.2
TRAK1-201ENST00000327628 RRBP1Q9P2E9 1410 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms